ca4b6d0d29c6d29b43df588a4635b556acc84f7f lrnassar Fri Jul 31 16:59:51 2026 -0700 Fix maxCheckboxes spelling in trackDb docs, which listed it as maxCheckBoxes. Setting names are case sensitive and the browser reads the lowercase form, so hubs copying the documented spelling silently got the default. Also adds level-new tags to the faceted composite settings metaDataUrl, primaryKey, maxCheckboxes and dataTypes so hubCheck -checkSettings recognizes them instead of reporting them as unknown. refs #37965 diff --git src/hg/htdocs/goldenPath/help/trackDb/changes.html src/hg/htdocs/goldenPath/help/trackDb/changes.html index 0378697289f..62ba038339b 100755 --- src/hg/htdocs/goldenPath/help/trackDb/changes.html +++ src/hg/htdocs/goldenPath/help/trackDb/changes.html @@ -33,30 +33,40 @@
This document summarizes the changes to the UCSC Genome Browser Hub TrackDb specification.
| Date | Track Types | Link to Doc | Change |
|---|---|---|---|
| 2026-07-31 | +faceted composite | +maxCheckboxes | +Documentation fix: this setting was previously listed here as
+ maxCheckBoxes, with a capital B. Setting names are case sensitive and the
+ browser has always read it as maxCheckboxes, so hubs that used the
+ capitalized spelling fell back to the default of 20 facet values. If your hub sets
+ maxCheckBoxes, change it to maxCheckboxes. |
+
| 2026-07-08 | genomes.txt setting | codonTable | New codonTable genome-stanza setting (an assembly hub
genomes.txt setting, not a track setting) assigns NCBI genetic
codes to individual sequences for amino acid display, e.g.
codonTable default=1 NC_017929.1=13. Affects the base position
track three-frame translation, codon-colored tracks such as gene
predictions, and details pages. Sequences named chrM/chrMT still default to
the vertebrate mitochondrial code. |
| 2026-06-02 | bigBed, bigGenePred |