02782ec9c99ef7f54699068afbc902e7dedccb93 lrnassar Sun Jun 14 00:34:26 2026 -0700 lrSv: format the lrSvAll merged-track mouseOver as multi-line HTML. refs #36258 Replace the inline mouseOver with bold-labeled lines (Var / SV len / Ins len / Sources / AF range / AC), in both the generated lrSvAll.ra and the lrSvMergeAll.py generator that writes it, so a future merge regeneration reproduces the same format. diff --git src/hg/makeDb/trackDb/human/lrSvAll.ra src/hg/makeDb/trackDb/human/lrSvAll.ra index cd00dc39968..220e5911871 100644 --- src/hg/makeDb/trackDb/human/lrSvAll.ra +++ src/hg/makeDb/trackDb/human/lrSvAll.ra @@ -1,40 +1,40 @@ # AUTO-GENERATED by ~/kent/src/hg/makeDb/scripts/lrSv/lrSvMergeAll.py # Do not edit by hand - re-run the merge script and re-commit. track lrSvAll parent lrSv bigDataUrl /gbdb/$D/lrSv/lrSvAll.bb shortLabel All LR SVs merged longLabel All long-read SVs merged across subtracks by exact position, with per-database AC type bigBed 9 + itemRgb on visibility pack - mouseOver $name ($svType) svLen=$svLen insLen=$insLen sources=$sources AF=$minAF-$maxAF AC=$AC + mouseOver Var: $name ($svType)
SV len: $svLen
Ins len: $insLen
Sources: $sources
AF range: $minAF-$maxAF
AC: $AC filterValues.sources CoLoRSdb|CoLoRSdb 1427 (PacBio),1000G-ONT-Vienna|1KG ONT Vienna 1019,1000G-ONT|1KG ONT 100 (Gustafson),AoU1K|All of Us 1027 (PacBio),Han945|Han Chinese 945,TommoJapan|ToMMo 333 (Japanese),GA4K|GA4K 502 (rare disease),deCODE|deCODE 3622 (Icelandic),HPRCv2.1|HPRC v2.1 233,HGSVC2|HGSVC2 32,HGSVC3|HGSVC3 65,ArabUAE53|Arab APR 53,China58|CPC 58 (Chinese),Svatalog101|SVatalog 101 filterType.sources multipleListOr filterLabel.sources Source Database filterValues.svType DEL,INS,DUP,INV,CPX,MIXED,INSDEL,CNV,BND,TRA,MEI filterType.svType multipleListOr filterLabel.svType SV Type filter.svLen 0:30000000 filterByRange.svLen on filterLabel.svLen SV Length (bp) filter.insLen 0:600000 filterByRange.insLen on filterLabel.insLen Insertion Length (bp) filter.maxAF 0:1 filterByRange.maxAF on filterLimits.maxAF 0:1 filterLabel.maxAF Max Allele Frequency (across DBs) filter.minAF 0:1 filterByRange.minAF on filterLimits.minAF 0:1 filterLabel.minAF Min Allele Frequency (across DBs) filter.AC 0:30000 filterByRange.AC on filterLabel.AC Total AC (across DBs) filter.sourceCount 1:14 filterByRange.sourceCount on filterLabel.sourceCount Number of Source Databases skipEmptyFields on priority 0