9b5f3d76a56c8f5e1957869c0faeea4be5182256 markd Sat May 31 12:56:22 2025 -0700 GENCODE Versions V48lift38 diff --git src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html index 6fc527510cb..aca7734bb9d 100644 --- src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html +++ src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html @@ -51,30 +51,34 @@ <p> GENCODE Genes and its associated tables can be explored interactively using the <a href="../goldenPath/help/api.html" target="_blank">REST API</a>, the <a href="/cgi-bin/hgTables" target="_blank">Table Browser</a> or the <a href="/cgi-bin/hgIntegrator" target="_blank">Data Integrator</a>. The GENCODE data files for hg19 are available in our <a target="_blank" href="http://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/"> downloads directory</a> as wgEncodeGencode* in genePred format. All the tables can also be queried directly from our public MySQL servers, with instructions on this method available on our <a target="_blank" href="/goldenPath/help/mysql.html">MySQL help page</a> and on <a target="_blank" href="http://genome.ucsc.edu/blog/tag/mysql/">our blog</a>.</p> <h2>Release Notes</h2> <p> +<span style="font-weight: bold;">GENCODE version 48lift37 (mapped from GRCh38 to GRCh37)</span> +corresponds to Ensembl 114. +</p> +<p> <span style="font-weight: bold;">GENCODE version 47lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 113. </p> <p> <span style="font-weight: bold;">GENCODE version 46lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 112. </p> <p> <span style="font-weight: bold;">GENCODE version 45lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 111. </p> <p> <span style="font-weight: bold;">GENCODE version 43lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 109. </p>