d0507a008bc27f625eaf356b3fb967abb070f697 markd Sat May 31 12:44:55 2025 -0700 GENCODE Version VM37 diff --git src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.html src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.html index fdf524f5bcd..c3300c48bb1 100644 --- src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.html +++ src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.html @@ -1,30 +1,30 @@

Description

-The GENCODE Genes track (version M37, Feb 2025 pre-release) shows high-quality manual +The GENCODE Genes track (version M37, May 2025) shows high-quality manual annotations merged with evidence-based automated annotations across the entire mouse genome generated by the GENCODE project. The GENCODE gene set presents a full merge between HAVANA manual annotation process and Ensembl automatic annotation pipeline. Priority is given to the manually curated HAVANA annotation using predicted Ensembl annotations when there are no corresponding manual annotations. The M37 annotation was carried out on genome assembly GRCm39 (mm39).

The Ensembl human and mouse data sets are the same gene annotations as GENCODE for the corresponding release.

Downloads

GENCODE GFF3 and GTF files are available from the GENCODE release M37 site.

Release Notes

GENCODE version M37 corresponds to Ensembl 114.

See also: The GENCODE Project