01bc05ac9a282a6862111502f13601e513d5b60b
max
Tue Sep 8 06:16:04 2026 -0700
hg38 Fiber-seq: merge the methylation composite into the compendium
The accessibility compendium and the separate Methylation composite covered the
identical 41 samples, and cartDump.c assigns priority with the data element as
the outer loop and the data type as the inner one. So one composite keeps a
sample's six subtracks contiguous in the image, where two composites drew an
accessibility block followed by a methylation block and comparing the two assays
for one sample meant reading past every other sample. Both come off the same
molecules in the same experiment, so side by side is the point. fiberSeqMeth is
gone and its three data types moved in as cpg, cpgHap and cpgDiff, renamed
because "hap" was already taken by the accessibility overlay and a data type
name cannot contain an underscore.
Subtracks now carry an explicit priority, sample outer and declared data type
inner. Without one they fell back to a label sort, so a first visit showed a
sample's data types as Peaks, CpG, Acc rather than in the order of the checkbox
row above the table.
Metadata columns renamed from camelCase to Accession, Sample_class, _Cell_type
and _Sample. toTitleStyle() in facetedComposite.js renders an underscore as a
space but does not split camelCase, so "sampleClass" appeared verbatim as a
column heading. A literal space cannot be used instead: the saved sort order is
a space-separated list of column names and the submit code drops any name
containing whitespace, which would have made sorting silently fail to persist.
Cell type is no longer faceted. A facet value is only offered when it occurs
more than once, and 12 of the 14 cell types here are a single sample, so as a
facet it drew two checkboxes and left 12 samples unreachable by any cell-type
filter. It is a searchable column now, and Sample_class is the only facet until
the lab gives us real HPRC metadata that would facet properly.
Description page intro rewritten, and it now says the assay measures the same
property as DNase-seq and ATAC-seq.
refs #36210
diff --git src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
index e66d1e8446a..0aa9270121e 100644
--- src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
+++ src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
@@ -76,6192 +76,6463 @@
longLabel Hek293T Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00009
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/all.percent.accessible.bw
color 204,121,167
shortLabel Jurkat
longLabel Jurkat Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqCompendium
parent fiberSeq
compositeTrack faceted
type bigWig
shortLabel Fiber-seq Compendium
- longLabel Fiber-seq percent accessible, FIRE peaks and haplotype overlays in 41 samples
+ longLabel Fiber-seq accessibility, FIRE peaks and CpG methylation in 41 samples
metaDataUrl /gbdb/hg38/fiberSeq/fiberSeqCompendium_metadata.tsv
colorSettingsUrl /gbdb/hg38/fiberSeq/fiberSeqCompendium_colors.json
- primaryKey accession
- dataTypes acc|"Percent accessible" peaks|"FIRE peaks" hap|"Haplotype accessibility"
- defaultSortField accession
+ primaryKey Accession
+ dataTypes acc|"Percent accessible" peaks|"FIRE peaks" hap|"Haplotype accessibility" cpg|"CpG methylation" cpgHap|"Haplotype CpG" cpgDiff|"CpG haplotype difference"
+ defaultSortField Accession
maxCheckboxes 50
noInherit on
visibility hide
priority 2
track fiberSeqCompendium_PM00001_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/all.percent.accessible.bw
shortLabel GM12878 Acc
longLabel GM12878 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 1
track fiberSeqCompendium_PM00001_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/fire-peaks.ucsc.bb
shortLabel GM12878 Peaks
longLabel GM12878 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM12878 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 2
track fiberSeqCompendium_PM00001_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM12878 Hap1/2
longLabel GM12878 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 3
track fiberSeqCompendium_PM00001_hap_h1
parent fiberSeqCompendium_PM00001_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM12878 Hap1
longLabel GM12878 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00001_hap_h2
parent fiberSeqCompendium_PM00001_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM12878 Hap2
longLabel GM12878 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00001_cpg
+ parent fiberSeqCompendium on
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.combined.bw
+ shortLabel GM12878 CpG
+ longLabel GM12878 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 4
+
+ track fiberSeqCompendium_PM00001_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel GM12878 CpG Hap1/2
+ longLabel GM12878 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 5
+
+ track fiberSeqCompendium_PM00001_cpgHap_h1
+ parent fiberSeqCompendium_PM00001_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap1.bw
+ color 0,114,178
+ shortLabel GM12878 Hap1
+ longLabel GM12878 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00001_cpgHap_h2
+ parent fiberSeqCompendium_PM00001_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap2.bw
+ color 213,94,0
+ shortLabel GM12878 Hap2
+ longLabel GM12878 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00001_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel GM12878 CpG diff
+ longLabel GM12878 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 6
+
+ track fiberSeqCompendium_PM00001_cpgDiff_l0
+ parent fiberSeqCompendium_PM00001_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel GM12878 All
+ longLabel GM12878 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00001_cpgDiff_l1
+ parent fiberSeqCompendium_PM00001_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel GM12878 p < 0.01
+ longLabel GM12878 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00001_cpgDiff_l2
+ parent fiberSeqCompendium_PM00001_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel GM12878 p < 0.001
+ longLabel GM12878 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00001_cpgDiff_l3
+ parent fiberSeqCompendium_PM00001_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel GM12878 p < 0.0001
+ longLabel GM12878 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00002_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/all.percent.accessible.bw
shortLabel HG002 Acc
longLabel HG002 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 11
track fiberSeqCompendium_PM00002_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/fire-peaks.ucsc.bb
shortLabel HG002 Peaks
longLabel HG002 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG002 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 12
track fiberSeqCompendium_PM00002_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG002 Hap1/2
longLabel HG002 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 13
track fiberSeqCompendium_PM00002_hap_h1
parent fiberSeqCompendium_PM00002_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG002 Hap1
longLabel HG002 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00002_hap_h2
parent fiberSeqCompendium_PM00002_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG002 Hap2
longLabel HG002 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00002_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.combined.bw
+ shortLabel HG002 CpG
+ longLabel HG002 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 14
+
+ track fiberSeqCompendium_PM00002_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG002 CpG Hap1/2
+ longLabel HG002 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 15
+
+ track fiberSeqCompendium_PM00002_cpgHap_h1
+ parent fiberSeqCompendium_PM00002_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG002 Hap1
+ longLabel HG002 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00002_cpgHap_h2
+ parent fiberSeqCompendium_PM00002_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG002 Hap2
+ longLabel HG002 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00002_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG002 CpG diff
+ longLabel HG002 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 16
+
+ track fiberSeqCompendium_PM00002_cpgDiff_l0
+ parent fiberSeqCompendium_PM00002_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG002 All
+ longLabel HG002 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00002_cpgDiff_l1
+ parent fiberSeqCompendium_PM00002_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG002 p < 0.01
+ longLabel HG002 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00002_cpgDiff_l2
+ parent fiberSeqCompendium_PM00002_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG002 p < 0.001
+ longLabel HG002 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00002_cpgDiff_l3
+ parent fiberSeqCompendium_PM00002_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG002 p < 0.0001
+ longLabel HG002 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00004_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/all.percent.accessible.bw
shortLabel K562 Acc
longLabel K562 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 21
track fiberSeqCompendium_PM00004_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/fire-peaks.ucsc.bb
shortLabel K562 Peaks
longLabel K562 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver K562 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 22
track fiberSeqCompendium_PM00004_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel K562 Hap1/2
longLabel K562 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 23
track fiberSeqCompendium_PM00004_hap_h1
parent fiberSeqCompendium_PM00004_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/hap1.percent.accessible.bw
color 0,114,178
shortLabel K562 Hap1
longLabel K562 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00004_hap_h2
parent fiberSeqCompendium_PM00004_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/hap2.percent.accessible.bw
color 213,94,0
shortLabel K562 Hap2
longLabel K562 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00004_cpg
+ parent fiberSeqCompendium on
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.combined.bw
+ shortLabel K562 CpG
+ longLabel K562 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 24
+
+ track fiberSeqCompendium_PM00004_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel K562 CpG Hap1/2
+ longLabel K562 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 25
+
+ track fiberSeqCompendium_PM00004_cpgHap_h1
+ parent fiberSeqCompendium_PM00004_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap1.bw
+ color 0,114,178
+ shortLabel K562 Hap1
+ longLabel K562 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00004_cpgHap_h2
+ parent fiberSeqCompendium_PM00004_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap2.bw
+ color 213,94,0
+ shortLabel K562 Hap2
+ longLabel K562 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00004_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel K562 CpG diff
+ longLabel K562 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 26
+
+ track fiberSeqCompendium_PM00004_cpgDiff_l0
+ parent fiberSeqCompendium_PM00004_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel K562 All
+ longLabel K562 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00004_cpgDiff_l1
+ parent fiberSeqCompendium_PM00004_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel K562 p < 0.01
+ longLabel K562 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00004_cpgDiff_l2
+ parent fiberSeqCompendium_PM00004_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel K562 p < 0.001
+ longLabel K562 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00004_cpgDiff_l3
+ parent fiberSeqCompendium_PM00004_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel K562 p < 0.0001
+ longLabel K562 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00005_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/all.percent.accessible.bw
shortLabel HepG2 Acc
longLabel HepG2 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 31
track fiberSeqCompendium_PM00005_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/fire-peaks.ucsc.bb
shortLabel HepG2 Peaks
longLabel HepG2 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HepG2 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 32
track fiberSeqCompendium_PM00005_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HepG2 Hap1/2
longLabel HepG2 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 33
track fiberSeqCompendium_PM00005_hap_h1
parent fiberSeqCompendium_PM00005_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/hap1.percent.accessible.bw
color 0,114,178
shortLabel HepG2 Hap1
longLabel HepG2 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00005_hap_h2
parent fiberSeqCompendium_PM00005_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/hap2.percent.accessible.bw
color 213,94,0
shortLabel HepG2 Hap2
longLabel HepG2 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PM00006_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/all.percent.accessible.bw
- shortLabel Panc1 Acc
- longLabel Panc1 Fiber-seq percent accessible, both haplotypes
+ track fiberSeqCompendium_PM00005_cpg
+ parent fiberSeqCompendium on
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.combined.bw
+ shortLabel HepG2 CpG
+ longLabel HepG2 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 34
- track fiberSeqCompendium_PM00006_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/fire-peaks.ucsc.bb
- shortLabel Panc1 Peaks
- longLabel Panc1 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver Panc1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PM00006_hap
+ track fiberSeqCompendium_PM00005_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HepG2 CpG Hap1/2
+ longLabel HepG2 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 35
+
+ track fiberSeqCompendium_PM00005_cpgHap_h1
+ parent fiberSeqCompendium_PM00005_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HepG2 Hap1
+ longLabel HepG2 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00005_cpgHap_h2
+ parent fiberSeqCompendium_PM00005_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HepG2 Hap2
+ longLabel HepG2 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00005_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HepG2 CpG diff
+ longLabel HepG2 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 36
+
+ track fiberSeqCompendium_PM00005_cpgDiff_l0
+ parent fiberSeqCompendium_PM00005_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HepG2 All
+ longLabel HepG2 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00005_cpgDiff_l1
+ parent fiberSeqCompendium_PM00005_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HepG2 p < 0.01
+ longLabel HepG2 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00005_cpgDiff_l2
+ parent fiberSeqCompendium_PM00005_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HepG2 p < 0.001
+ longLabel HepG2 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00005_cpgDiff_l3
+ parent fiberSeqCompendium_PM00005_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HepG2 p < 0.0001
+ longLabel HepG2 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PM00006_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/all.percent.accessible.bw
+ shortLabel Panc1 Acc
+ longLabel Panc1 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 41
+
+ track fiberSeqCompendium_PM00006_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/fire-peaks.ucsc.bb
+ shortLabel Panc1 Peaks
+ longLabel Panc1 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver Panc1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 42
+
+ track fiberSeqCompendium_PM00006_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Panc1 Hap1/2
longLabel Panc1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 43
track fiberSeqCompendium_PM00006_hap_h1
parent fiberSeqCompendium_PM00006_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/hap1.percent.accessible.bw
color 0,114,178
shortLabel Panc1 Hap1
longLabel Panc1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00006_hap_h2
parent fiberSeqCompendium_PM00006_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/hap2.percent.accessible.bw
color 213,94,0
shortLabel Panc1 Hap2
longLabel Panc1 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00006_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.combined.bw
+ shortLabel Panc1 CpG
+ longLabel Panc1 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 44
+
+ track fiberSeqCompendium_PM00006_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel Panc1 CpG Hap1/2
+ longLabel Panc1 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 45
+
+ track fiberSeqCompendium_PM00006_cpgHap_h1
+ parent fiberSeqCompendium_PM00006_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.hap1.bw
+ color 0,114,178
+ shortLabel Panc1 Hap1
+ longLabel Panc1 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00006_cpgHap_h2
+ parent fiberSeqCompendium_PM00006_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.hap2.bw
+ color 213,94,0
+ shortLabel Panc1 Hap2
+ longLabel Panc1 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00006_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel Panc1 CpG diff
+ longLabel Panc1 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 46
+
+ track fiberSeqCompendium_PM00006_cpgDiff_l0
+ parent fiberSeqCompendium_PM00006_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel Panc1 All
+ longLabel Panc1 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00006_cpgDiff_l1
+ parent fiberSeqCompendium_PM00006_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel Panc1 p < 0.01
+ longLabel Panc1 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00006_cpgDiff_l2
+ parent fiberSeqCompendium_PM00006_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel Panc1 p < 0.001
+ longLabel Panc1 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00006_cpgDiff_l3
+ parent fiberSeqCompendium_PM00006_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel Panc1 p < 0.0001
+ longLabel Panc1 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00007_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/all.percent.accessible.bw
shortLabel THP-1 Acc
longLabel THP-1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 51
track fiberSeqCompendium_PM00007_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/fire-peaks.ucsc.bb
shortLabel THP-1 Peaks
longLabel THP-1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver THP-1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 52
track fiberSeqCompendium_PM00007_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel THP-1 Hap1/2
longLabel THP-1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 53
track fiberSeqCompendium_PM00007_hap_h1
parent fiberSeqCompendium_PM00007_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/hap1.percent.accessible.bw
color 0,114,178
shortLabel THP-1 Hap1
longLabel THP-1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00007_hap_h2
parent fiberSeqCompendium_PM00007_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/hap2.percent.accessible.bw
color 213,94,0
shortLabel THP-1 Hap2
longLabel THP-1 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00007_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.combined.bw
+ shortLabel THP-1 CpG
+ longLabel THP-1 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 54
+
+ track fiberSeqCompendium_PM00007_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel THP-1 CpG Hap1/2
+ longLabel THP-1 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 55
+
+ track fiberSeqCompendium_PM00007_cpgHap_h1
+ parent fiberSeqCompendium_PM00007_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.hap1.bw
+ color 0,114,178
+ shortLabel THP-1 Hap1
+ longLabel THP-1 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00007_cpgHap_h2
+ parent fiberSeqCompendium_PM00007_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.hap2.bw
+ color 213,94,0
+ shortLabel THP-1 Hap2
+ longLabel THP-1 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00007_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel THP-1 CpG diff
+ longLabel THP-1 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 56
+
+ track fiberSeqCompendium_PM00007_cpgDiff_l0
+ parent fiberSeqCompendium_PM00007_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel THP-1 All
+ longLabel THP-1 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00007_cpgDiff_l1
+ parent fiberSeqCompendium_PM00007_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel THP-1 p < 0.01
+ longLabel THP-1 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00007_cpgDiff_l2
+ parent fiberSeqCompendium_PM00007_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel THP-1 p < 0.001
+ longLabel THP-1 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00007_cpgDiff_l3
+ parent fiberSeqCompendium_PM00007_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel THP-1 p < 0.0001
+ longLabel THP-1 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00008_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/all.percent.accessible.bw
shortLabel Hap1 Acc
longLabel Hap1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 61
track fiberSeqCompendium_PM00008_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/fire-peaks.ucsc.bb
shortLabel Hap1 Peaks
longLabel Hap1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Hap1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 62
track fiberSeqCompendium_PM00008_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Hap1 Hap1/2
longLabel Hap1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 63
track fiberSeqCompendium_PM00008_hap_h1
parent fiberSeqCompendium_PM00008_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/hap1.percent.accessible.bw
color 0,114,178
shortLabel Hap1 Hap1
longLabel Hap1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00008_hap_h2
parent fiberSeqCompendium_PM00008_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/hap2.percent.accessible.bw
color 213,94,0
shortLabel Hap1 Hap2
longLabel Hap1 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PM00009_acc
+ track fiberSeqCompendium_PM00008_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/all.percent.accessible.bw
- shortLabel Jurkat Acc
- longLabel Jurkat Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.combined.bw
+ shortLabel Hap1 CpG
+ longLabel Hap1 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 64
- track fiberSeqCompendium_PM00009_peaks
+ track fiberSeqCompendium_PM00008_cpgHap
parent fiberSeqCompendium off
- type bigNarrowPeak
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel Hap1 CpG Hap1/2
+ longLabel Hap1 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 65
+
+ track fiberSeqCompendium_PM00008_cpgHap_h1
+ parent fiberSeqCompendium_PM00008_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.hap1.bw
+ color 0,114,178
+ shortLabel Hap1 Hap1
+ longLabel Hap1 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00008_cpgHap_h2
+ parent fiberSeqCompendium_PM00008_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.hap2.bw
+ color 213,94,0
+ shortLabel Hap1 Hap2
+ longLabel Hap1 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00008_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel Hap1 CpG diff
+ longLabel Hap1 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 66
+
+ track fiberSeqCompendium_PM00008_cpgDiff_l0
+ parent fiberSeqCompendium_PM00008_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel Hap1 All
+ longLabel Hap1 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00008_cpgDiff_l1
+ parent fiberSeqCompendium_PM00008_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel Hap1 p < 0.01
+ longLabel Hap1 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00008_cpgDiff_l2
+ parent fiberSeqCompendium_PM00008_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel Hap1 p < 0.001
+ longLabel Hap1 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00008_cpgDiff_l3
+ parent fiberSeqCompendium_PM00008_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel Hap1 p < 0.0001
+ longLabel Hap1 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PM00009_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/all.percent.accessible.bw
+ shortLabel Jurkat Acc
+ longLabel Jurkat Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 71
+
+ track fiberSeqCompendium_PM00009_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/fire-peaks.ucsc.bb
shortLabel Jurkat Peaks
longLabel Jurkat Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Jurkat FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 72
track fiberSeqCompendium_PM00009_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Jurkat Hap1/2
longLabel Jurkat Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 73
track fiberSeqCompendium_PM00009_hap_h1
parent fiberSeqCompendium_PM00009_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/hap1.percent.accessible.bw
color 0,114,178
shortLabel Jurkat Hap1
longLabel Jurkat Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00009_hap_h2
parent fiberSeqCompendium_PM00009_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/hap2.percent.accessible.bw
color 213,94,0
shortLabel Jurkat Hap2
longLabel Jurkat Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00009_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.combined.bw
+ shortLabel Jurkat CpG
+ longLabel Jurkat CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 74
+
+ track fiberSeqCompendium_PM00009_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel Jurkat CpG Hap1/2
+ longLabel Jurkat CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 75
+
+ track fiberSeqCompendium_PM00009_cpgHap_h1
+ parent fiberSeqCompendium_PM00009_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.hap1.bw
+ color 0,114,178
+ shortLabel Jurkat Hap1
+ longLabel Jurkat CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00009_cpgHap_h2
+ parent fiberSeqCompendium_PM00009_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.hap2.bw
+ color 213,94,0
+ shortLabel Jurkat Hap2
+ longLabel Jurkat CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00009_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel Jurkat CpG diff
+ longLabel Jurkat CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 76
+
+ track fiberSeqCompendium_PM00009_cpgDiff_l0
+ parent fiberSeqCompendium_PM00009_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel Jurkat All
+ longLabel Jurkat CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00009_cpgDiff_l1
+ parent fiberSeqCompendium_PM00009_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel Jurkat p < 0.01
+ longLabel Jurkat CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00009_cpgDiff_l2
+ parent fiberSeqCompendium_PM00009_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel Jurkat p < 0.001
+ longLabel Jurkat CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00009_cpgDiff_l3
+ parent fiberSeqCompendium_PM00009_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel Jurkat p < 0.0001
+ longLabel Jurkat CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00010_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/all.percent.accessible.bw
shortLabel H1 Acc
longLabel H1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 81
track fiberSeqCompendium_PM00010_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/fire-peaks.ucsc.bb
shortLabel H1 Peaks
longLabel H1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver H1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 82
track fiberSeqCompendium_PM00010_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel H1 Hap1/2
longLabel H1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 83
track fiberSeqCompendium_PM00010_hap_h1
parent fiberSeqCompendium_PM00010_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/hap1.percent.accessible.bw
color 0,114,178
shortLabel H1 Hap1
longLabel H1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00010_hap_h2
parent fiberSeqCompendium_PM00010_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/hap2.percent.accessible.bw
color 213,94,0
shortLabel H1 Hap2
longLabel H1 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00010_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.combined.bw
+ shortLabel H1 CpG
+ longLabel H1 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 84
+
+ track fiberSeqCompendium_PM00010_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel H1 CpG Hap1/2
+ longLabel H1 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 85
+
+ track fiberSeqCompendium_PM00010_cpgHap_h1
+ parent fiberSeqCompendium_PM00010_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap1.bw
+ color 0,114,178
+ shortLabel H1 Hap1
+ longLabel H1 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00010_cpgHap_h2
+ parent fiberSeqCompendium_PM00010_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap2.bw
+ color 213,94,0
+ shortLabel H1 Hap2
+ longLabel H1 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00010_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel H1 CpG diff
+ longLabel H1 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 86
+
+ track fiberSeqCompendium_PM00010_cpgDiff_l0
+ parent fiberSeqCompendium_PM00010_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel H1 All
+ longLabel H1 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00010_cpgDiff_l1
+ parent fiberSeqCompendium_PM00010_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel H1 p < 0.01
+ longLabel H1 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00010_cpgDiff_l2
+ parent fiberSeqCompendium_PM00010_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel H1 p < 0.001
+ longLabel H1 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00010_cpgDiff_l3
+ parent fiberSeqCompendium_PM00010_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel H1 p < 0.0001
+ longLabel H1 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PM00011_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/all.percent.accessible.bw
shortLabel H9 Acc
longLabel H9 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 91
track fiberSeqCompendium_PM00011_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/fire-peaks.ucsc.bb
shortLabel H9 Peaks
longLabel H9 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver H9 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 92
track fiberSeqCompendium_PM00011_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel H9 Hap1/2
longLabel H9 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 93
track fiberSeqCompendium_PM00011_hap_h1
parent fiberSeqCompendium_PM00011_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/hap1.percent.accessible.bw
color 0,114,178
shortLabel H9 Hap1
longLabel H9 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00011_hap_h2
parent fiberSeqCompendium_PM00011_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/hap2.percent.accessible.bw
color 213,94,0
shortLabel H9 Hap2
longLabel H9 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PM00012_acc
+ track fiberSeqCompendium_PM00011_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/all.percent.accessible.bw
- shortLabel Hek293T Acc
- longLabel Hek293T Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.combined.bw
+ shortLabel H9 CpG
+ longLabel H9 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 94
- track fiberSeqCompendium_PM00012_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/fire-peaks.ucsc.bb
- shortLabel Hek293T Peaks
- longLabel Hek293T Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver Hek293T FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PM00012_hap
+ track fiberSeqCompendium_PM00011_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel H9 CpG Hap1/2
+ longLabel H9 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 95
+
+ track fiberSeqCompendium_PM00011_cpgHap_h1
+ parent fiberSeqCompendium_PM00011_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.hap1.bw
+ color 0,114,178
+ shortLabel H9 Hap1
+ longLabel H9 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00011_cpgHap_h2
+ parent fiberSeqCompendium_PM00011_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.hap2.bw
+ color 213,94,0
+ shortLabel H9 Hap2
+ longLabel H9 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00011_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel H9 CpG diff
+ longLabel H9 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 96
+
+ track fiberSeqCompendium_PM00011_cpgDiff_l0
+ parent fiberSeqCompendium_PM00011_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel H9 All
+ longLabel H9 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00011_cpgDiff_l1
+ parent fiberSeqCompendium_PM00011_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel H9 p < 0.01
+ longLabel H9 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00011_cpgDiff_l2
+ parent fiberSeqCompendium_PM00011_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel H9 p < 0.001
+ longLabel H9 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00011_cpgDiff_l3
+ parent fiberSeqCompendium_PM00011_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel H9 p < 0.0001
+ longLabel H9 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PM00012_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/all.percent.accessible.bw
+ shortLabel Hek293T Acc
+ longLabel Hek293T Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 101
+
+ track fiberSeqCompendium_PM00012_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/fire-peaks.ucsc.bb
+ shortLabel Hek293T Peaks
+ longLabel Hek293T Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver Hek293T FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 102
+
+ track fiberSeqCompendium_PM00012_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Hek293T Hap1/2
longLabel Hek293T Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 103
track fiberSeqCompendium_PM00012_hap_h1
parent fiberSeqCompendium_PM00012_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/hap1.percent.accessible.bw
color 0,114,178
shortLabel Hek293T Hap1
longLabel Hek293T Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00012_hap_h2
parent fiberSeqCompendium_PM00012_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/hap2.percent.accessible.bw
color 213,94,0
shortLabel Hek293T Hap2
longLabel Hek293T Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PM00012_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.combined.bw
+ shortLabel Hek293T CpG
+ longLabel Hek293T CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 104
+
+ track fiberSeqCompendium_PM00012_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel Hek293T CpG Hap1/2
+ longLabel Hek293T CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 105
+
+ track fiberSeqCompendium_PM00012_cpgHap_h1
+ parent fiberSeqCompendium_PM00012_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap1.bw
+ color 0,114,178
+ shortLabel Hek293T Hap1
+ longLabel Hek293T CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PM00012_cpgHap_h2
+ parent fiberSeqCompendium_PM00012_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap2.bw
+ color 213,94,0
+ shortLabel Hek293T Hap2
+ longLabel Hek293T CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PM00012_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel Hek293T CpG diff
+ longLabel Hek293T CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 106
+
+ track fiberSeqCompendium_PM00012_cpgDiff_l0
+ parent fiberSeqCompendium_PM00012_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel Hek293T All
+ longLabel Hek293T CpG haplotype difference, All
+
+ track fiberSeqCompendium_PM00012_cpgDiff_l1
+ parent fiberSeqCompendium_PM00012_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel Hek293T p < 0.01
+ longLabel Hek293T CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PM00012_cpgDiff_l2
+ parent fiberSeqCompendium_PM00012_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel Hek293T p < 0.001
+ longLabel Hek293T CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PM00012_cpgDiff_l3
+ parent fiberSeqCompendium_PM00012_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel Hek293T p < 0.0001
+ longLabel Hek293T CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00971_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/all.percent.accessible.bw
shortLabel HG01123 Acc
longLabel HG01123 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 111
track fiberSeqCompendium_PS00971_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/fire-peaks.ucsc.bb
shortLabel HG01123 Peaks
longLabel HG01123 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01123 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 112
track fiberSeqCompendium_PS00971_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01123 Hap1/2
longLabel HG01123 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 113
track fiberSeqCompendium_PS00971_hap_h1
parent fiberSeqCompendium_PS00971_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01123 Hap1
longLabel HG01123 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00971_hap_h2
parent fiberSeqCompendium_PS00971_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01123 Hap2
longLabel HG01123 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00971_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.combined.bw
+ shortLabel HG01123 CpG
+ longLabel HG01123 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 114
+
+ track fiberSeqCompendium_PS00971_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG01123 CpG Hap1/2
+ longLabel HG01123 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 115
+
+ track fiberSeqCompendium_PS00971_cpgHap_h1
+ parent fiberSeqCompendium_PS00971_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG01123 Hap1
+ longLabel HG01123 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00971_cpgHap_h2
+ parent fiberSeqCompendium_PS00971_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG01123 Hap2
+ longLabel HG01123 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00971_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG01123 CpG diff
+ longLabel HG01123 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 116
+
+ track fiberSeqCompendium_PS00971_cpgDiff_l0
+ parent fiberSeqCompendium_PS00971_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG01123 All
+ longLabel HG01123 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00971_cpgDiff_l1
+ parent fiberSeqCompendium_PS00971_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG01123 p < 0.01
+ longLabel HG01123 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00971_cpgDiff_l2
+ parent fiberSeqCompendium_PS00971_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG01123 p < 0.001
+ longLabel HG01123 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00971_cpgDiff_l3
+ parent fiberSeqCompendium_PS00971_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG01123 p < 0.0001
+ longLabel HG01123 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00972_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/all.percent.accessible.bw
shortLabel HG01258 Acc
longLabel HG01258 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 121
track fiberSeqCompendium_PS00972_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/fire-peaks.ucsc.bb
shortLabel HG01258 Peaks
longLabel HG01258 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01258 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 122
track fiberSeqCompendium_PS00972_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01258 Hap1/2
longLabel HG01258 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 123
track fiberSeqCompendium_PS00972_hap_h1
parent fiberSeqCompendium_PS00972_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01258 Hap1
longLabel HG01258 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00972_hap_h2
parent fiberSeqCompendium_PS00972_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01258 Hap2
longLabel HG01258 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00973_acc
+ track fiberSeqCompendium_PS00972_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00973/all.percent.accessible.bw
- shortLabel HG01358 Acc
- longLabel HG01358 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.combined.bw
+ shortLabel HG01258 CpG
+ longLabel HG01258 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 124
- track fiberSeqCompendium_PS00973_peaks
+ track fiberSeqCompendium_PS00972_cpgHap
parent fiberSeqCompendium off
- type bigNarrowPeak
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG01258 CpG Hap1/2
+ longLabel HG01258 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 125
+
+ track fiberSeqCompendium_PS00972_cpgHap_h1
+ parent fiberSeqCompendium_PS00972_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG01258 Hap1
+ longLabel HG01258 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00972_cpgHap_h2
+ parent fiberSeqCompendium_PS00972_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG01258 Hap2
+ longLabel HG01258 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00972_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG01258 CpG diff
+ longLabel HG01258 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 126
+
+ track fiberSeqCompendium_PS00972_cpgDiff_l0
+ parent fiberSeqCompendium_PS00972_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG01258 All
+ longLabel HG01258 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00972_cpgDiff_l1
+ parent fiberSeqCompendium_PS00972_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG01258 p < 0.01
+ longLabel HG01258 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00972_cpgDiff_l2
+ parent fiberSeqCompendium_PS00972_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG01258 p < 0.001
+ longLabel HG01258 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00972_cpgDiff_l3
+ parent fiberSeqCompendium_PS00972_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG01258 p < 0.0001
+ longLabel HG01258 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS00973_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/all.percent.accessible.bw
+ shortLabel HG01358 Acc
+ longLabel HG01358 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 131
+
+ track fiberSeqCompendium_PS00973_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/fire-peaks.ucsc.bb
shortLabel HG01358 Peaks
longLabel HG01358 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01358 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 132
track fiberSeqCompendium_PS00973_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01358 Hap1/2
longLabel HG01358 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 133
track fiberSeqCompendium_PS00973_hap_h1
parent fiberSeqCompendium_PS00973_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01358 Hap1
longLabel HG01358 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00973_hap_h2
parent fiberSeqCompendium_PS00973_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01358 Hap2
longLabel HG01358 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00973_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.combined.bw
+ shortLabel HG01358 CpG
+ longLabel HG01358 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 134
+
+ track fiberSeqCompendium_PS00973_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG01358 CpG Hap1/2
+ longLabel HG01358 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 135
+
+ track fiberSeqCompendium_PS00973_cpgHap_h1
+ parent fiberSeqCompendium_PS00973_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG01358 Hap1
+ longLabel HG01358 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00973_cpgHap_h2
+ parent fiberSeqCompendium_PS00973_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG01358 Hap2
+ longLabel HG01358 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00973_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG01358 CpG diff
+ longLabel HG01358 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 136
+
+ track fiberSeqCompendium_PS00973_cpgDiff_l0
+ parent fiberSeqCompendium_PS00973_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG01358 All
+ longLabel HG01358 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00973_cpgDiff_l1
+ parent fiberSeqCompendium_PS00973_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG01358 p < 0.01
+ longLabel HG01358 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00973_cpgDiff_l2
+ parent fiberSeqCompendium_PS00973_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG01358 p < 0.001
+ longLabel HG01358 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00973_cpgDiff_l3
+ parent fiberSeqCompendium_PS00973_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG01358 p < 0.0001
+ longLabel HG01358 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00974_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/all.percent.accessible.bw
shortLabel HG01361 Acc
longLabel HG01361 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 141
track fiberSeqCompendium_PS00974_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/fire-peaks.ucsc.bb
shortLabel HG01361 Peaks
longLabel HG01361 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01361 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 142
track fiberSeqCompendium_PS00974_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01361 Hap1/2
longLabel HG01361 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 143
track fiberSeqCompendium_PS00974_hap_h1
parent fiberSeqCompendium_PS00974_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01361 Hap1
longLabel HG01361 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00974_hap_h2
parent fiberSeqCompendium_PS00974_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01361 Hap2
longLabel HG01361 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00974_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.combined.bw
+ shortLabel HG01361 CpG
+ longLabel HG01361 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 144
+
+ track fiberSeqCompendium_PS00974_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG01361 CpG Hap1/2
+ longLabel HG01361 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 145
+
+ track fiberSeqCompendium_PS00974_cpgHap_h1
+ parent fiberSeqCompendium_PS00974_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG01361 Hap1
+ longLabel HG01361 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00974_cpgHap_h2
+ parent fiberSeqCompendium_PS00974_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG01361 Hap2
+ longLabel HG01361 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00974_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG01361 CpG diff
+ longLabel HG01361 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 146
+
+ track fiberSeqCompendium_PS00974_cpgDiff_l0
+ parent fiberSeqCompendium_PS00974_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG01361 All
+ longLabel HG01361 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00974_cpgDiff_l1
+ parent fiberSeqCompendium_PS00974_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG01361 p < 0.01
+ longLabel HG01361 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00974_cpgDiff_l2
+ parent fiberSeqCompendium_PS00974_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG01361 p < 0.001
+ longLabel HG01361 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00974_cpgDiff_l3
+ parent fiberSeqCompendium_PS00974_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG01361 p < 0.0001
+ longLabel HG01361 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00975_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/all.percent.accessible.bw
shortLabel HG01891 Acc
longLabel HG01891 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 151
track fiberSeqCompendium_PS00975_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/fire-peaks.ucsc.bb
shortLabel HG01891 Peaks
longLabel HG01891 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01891 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 152
track fiberSeqCompendium_PS00975_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01891 Hap1/2
longLabel HG01891 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 153
track fiberSeqCompendium_PS00975_hap_h1
parent fiberSeqCompendium_PS00975_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01891 Hap1
longLabel HG01891 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00975_hap_h2
parent fiberSeqCompendium_PS00975_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01891 Hap2
longLabel HG01891 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00976_acc
+ track fiberSeqCompendium_PS00975_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00976/all.percent.accessible.bw
- shortLabel HG02071 Acc
- longLabel HG02071 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.combined.bw
+ shortLabel HG01891 CpG
+ longLabel HG01891 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 154
- track fiberSeqCompendium_PS00976_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS00976/fire-peaks.ucsc.bb
- shortLabel HG02071 Peaks
- longLabel HG02071 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HG02071 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS00976_hap
+ track fiberSeqCompendium_PS00975_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG01891 CpG Hap1/2
+ longLabel HG01891 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 155
+
+ track fiberSeqCompendium_PS00975_cpgHap_h1
+ parent fiberSeqCompendium_PS00975_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG01891 Hap1
+ longLabel HG01891 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00975_cpgHap_h2
+ parent fiberSeqCompendium_PS00975_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG01891 Hap2
+ longLabel HG01891 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00975_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG01891 CpG diff
+ longLabel HG01891 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 156
+
+ track fiberSeqCompendium_PS00975_cpgDiff_l0
+ parent fiberSeqCompendium_PS00975_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG01891 All
+ longLabel HG01891 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00975_cpgDiff_l1
+ parent fiberSeqCompendium_PS00975_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG01891 p < 0.01
+ longLabel HG01891 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00975_cpgDiff_l2
+ parent fiberSeqCompendium_PS00975_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG01891 p < 0.001
+ longLabel HG01891 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00975_cpgDiff_l3
+ parent fiberSeqCompendium_PS00975_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG01891 p < 0.0001
+ longLabel HG01891 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS00976_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/all.percent.accessible.bw
+ shortLabel HG02071 Acc
+ longLabel HG02071 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 161
+
+ track fiberSeqCompendium_PS00976_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/fire-peaks.ucsc.bb
+ shortLabel HG02071 Peaks
+ longLabel HG02071 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver HG02071 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 162
+
+ track fiberSeqCompendium_PS00976_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02071 Hap1/2
longLabel HG02071 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 163
track fiberSeqCompendium_PS00976_hap_h1
parent fiberSeqCompendium_PS00976_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02071 Hap1
longLabel HG02071 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00976_hap_h2
parent fiberSeqCompendium_PS00976_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02071 Hap2
longLabel HG02071 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00976_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.combined.bw
+ shortLabel HG02071 CpG
+ longLabel HG02071 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 164
+
+ track fiberSeqCompendium_PS00976_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02071 CpG Hap1/2
+ longLabel HG02071 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 165
+
+ track fiberSeqCompendium_PS00976_cpgHap_h1
+ parent fiberSeqCompendium_PS00976_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02071 Hap1
+ longLabel HG02071 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00976_cpgHap_h2
+ parent fiberSeqCompendium_PS00976_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02071 Hap2
+ longLabel HG02071 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00976_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02071 CpG diff
+ longLabel HG02071 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 166
+
+ track fiberSeqCompendium_PS00976_cpgDiff_l0
+ parent fiberSeqCompendium_PS00976_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02071 All
+ longLabel HG02071 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00976_cpgDiff_l1
+ parent fiberSeqCompendium_PS00976_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02071 p < 0.01
+ longLabel HG02071 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00976_cpgDiff_l2
+ parent fiberSeqCompendium_PS00976_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02071 p < 0.001
+ longLabel HG02071 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00976_cpgDiff_l3
+ parent fiberSeqCompendium_PS00976_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02071 p < 0.0001
+ longLabel HG02071 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00977_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/all.percent.accessible.bw
shortLabel HG02074 Acc
longLabel HG02074 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 171
track fiberSeqCompendium_PS00977_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/fire-peaks.ucsc.bb
shortLabel HG02074 Peaks
longLabel HG02074 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02074 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 172
track fiberSeqCompendium_PS00977_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02074 Hap1/2
longLabel HG02074 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 173
track fiberSeqCompendium_PS00977_hap_h1
parent fiberSeqCompendium_PS00977_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02074 Hap1
longLabel HG02074 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00977_hap_h2
parent fiberSeqCompendium_PS00977_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02074 Hap2
longLabel HG02074 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00977_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.combined.bw
+ shortLabel HG02074 CpG
+ longLabel HG02074 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 174
+
+ track fiberSeqCompendium_PS00977_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02074 CpG Hap1/2
+ longLabel HG02074 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 175
+
+ track fiberSeqCompendium_PS00977_cpgHap_h1
+ parent fiberSeqCompendium_PS00977_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02074 Hap1
+ longLabel HG02074 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00977_cpgHap_h2
+ parent fiberSeqCompendium_PS00977_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02074 Hap2
+ longLabel HG02074 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00977_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02074 CpG diff
+ longLabel HG02074 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 176
+
+ track fiberSeqCompendium_PS00977_cpgDiff_l0
+ parent fiberSeqCompendium_PS00977_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02074 All
+ longLabel HG02074 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00977_cpgDiff_l1
+ parent fiberSeqCompendium_PS00977_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02074 p < 0.01
+ longLabel HG02074 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00977_cpgDiff_l2
+ parent fiberSeqCompendium_PS00977_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02074 p < 0.001
+ longLabel HG02074 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00977_cpgDiff_l3
+ parent fiberSeqCompendium_PS00977_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02074 p < 0.0001
+ longLabel HG02074 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00978_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/all.percent.accessible.bw
shortLabel HG02132 Acc
longLabel HG02132 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 181
track fiberSeqCompendium_PS00978_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/fire-peaks.ucsc.bb
shortLabel HG02132 Peaks
longLabel HG02132 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02132 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 182
track fiberSeqCompendium_PS00978_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02132 Hap1/2
longLabel HG02132 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 183
track fiberSeqCompendium_PS00978_hap_h1
parent fiberSeqCompendium_PS00978_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02132 Hap1
longLabel HG02132 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00978_hap_h2
parent fiberSeqCompendium_PS00978_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02132 Hap2
longLabel HG02132 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00979_acc
+ track fiberSeqCompendium_PS00978_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00979/all.percent.accessible.bw
- shortLabel HG02135 Acc
- longLabel HG02135 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.combined.bw
+ shortLabel HG02132 CpG
+ longLabel HG02132 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 184
- track fiberSeqCompendium_PS00979_peaks
+ track fiberSeqCompendium_PS00978_cpgHap
parent fiberSeqCompendium off
- type bigNarrowPeak
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02132 CpG Hap1/2
+ longLabel HG02132 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 185
+
+ track fiberSeqCompendium_PS00978_cpgHap_h1
+ parent fiberSeqCompendium_PS00978_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02132 Hap1
+ longLabel HG02132 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00978_cpgHap_h2
+ parent fiberSeqCompendium_PS00978_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02132 Hap2
+ longLabel HG02132 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00978_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02132 CpG diff
+ longLabel HG02132 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 186
+
+ track fiberSeqCompendium_PS00978_cpgDiff_l0
+ parent fiberSeqCompendium_PS00978_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02132 All
+ longLabel HG02132 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00978_cpgDiff_l1
+ parent fiberSeqCompendium_PS00978_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02132 p < 0.01
+ longLabel HG02132 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00978_cpgDiff_l2
+ parent fiberSeqCompendium_PS00978_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02132 p < 0.001
+ longLabel HG02132 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00978_cpgDiff_l3
+ parent fiberSeqCompendium_PS00978_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02132 p < 0.0001
+ longLabel HG02132 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS00979_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/all.percent.accessible.bw
+ shortLabel HG02135 Acc
+ longLabel HG02135 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 191
+
+ track fiberSeqCompendium_PS00979_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/fire-peaks.ucsc.bb
shortLabel HG02135 Peaks
longLabel HG02135 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02135 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 192
track fiberSeqCompendium_PS00979_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02135 Hap1/2
longLabel HG02135 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 193
track fiberSeqCompendium_PS00979_hap_h1
parent fiberSeqCompendium_PS00979_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02135 Hap1
longLabel HG02135 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00979_hap_h2
parent fiberSeqCompendium_PS00979_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02135 Hap2
longLabel HG02135 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00979_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.combined.bw
+ shortLabel HG02135 CpG
+ longLabel HG02135 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 194
+
+ track fiberSeqCompendium_PS00979_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02135 CpG Hap1/2
+ longLabel HG02135 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 195
+
+ track fiberSeqCompendium_PS00979_cpgHap_h1
+ parent fiberSeqCompendium_PS00979_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02135 Hap1
+ longLabel HG02135 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00979_cpgHap_h2
+ parent fiberSeqCompendium_PS00979_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02135 Hap2
+ longLabel HG02135 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00979_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02135 CpG diff
+ longLabel HG02135 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 196
+
+ track fiberSeqCompendium_PS00979_cpgDiff_l0
+ parent fiberSeqCompendium_PS00979_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02135 All
+ longLabel HG02135 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00979_cpgDiff_l1
+ parent fiberSeqCompendium_PS00979_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02135 p < 0.01
+ longLabel HG02135 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00979_cpgDiff_l2
+ parent fiberSeqCompendium_PS00979_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02135 p < 0.001
+ longLabel HG02135 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00979_cpgDiff_l3
+ parent fiberSeqCompendium_PS00979_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02135 p < 0.0001
+ longLabel HG02135 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00980_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/all.percent.accessible.bw
shortLabel HG02257 Acc
longLabel HG02257 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 201
track fiberSeqCompendium_PS00980_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/fire-peaks.ucsc.bb
shortLabel HG02257 Peaks
longLabel HG02257 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02257 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 202
track fiberSeqCompendium_PS00980_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02257 Hap1/2
longLabel HG02257 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 203
track fiberSeqCompendium_PS00980_hap_h1
parent fiberSeqCompendium_PS00980_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02257 Hap1
longLabel HG02257 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00980_hap_h2
parent fiberSeqCompendium_PS00980_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02257 Hap2
longLabel HG02257 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00980_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.combined.bw
+ shortLabel HG02257 CpG
+ longLabel HG02257 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 204
+
+ track fiberSeqCompendium_PS00980_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02257 CpG Hap1/2
+ longLabel HG02257 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 205
+
+ track fiberSeqCompendium_PS00980_cpgHap_h1
+ parent fiberSeqCompendium_PS00980_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02257 Hap1
+ longLabel HG02257 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00980_cpgHap_h2
+ parent fiberSeqCompendium_PS00980_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02257 Hap2
+ longLabel HG02257 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00980_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02257 CpG diff
+ longLabel HG02257 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 206
+
+ track fiberSeqCompendium_PS00980_cpgDiff_l0
+ parent fiberSeqCompendium_PS00980_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02257 All
+ longLabel HG02257 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00980_cpgDiff_l1
+ parent fiberSeqCompendium_PS00980_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02257 p < 0.01
+ longLabel HG02257 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00980_cpgDiff_l2
+ parent fiberSeqCompendium_PS00980_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02257 p < 0.001
+ longLabel HG02257 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00980_cpgDiff_l3
+ parent fiberSeqCompendium_PS00980_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02257 p < 0.0001
+ longLabel HG02257 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00981_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/all.percent.accessible.bw
shortLabel HG02486 Acc
longLabel HG02486 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 211
track fiberSeqCompendium_PS00981_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/fire-peaks.ucsc.bb
shortLabel HG02486 Peaks
longLabel HG02486 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02486 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 212
track fiberSeqCompendium_PS00981_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02486 Hap1/2
longLabel HG02486 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 213
track fiberSeqCompendium_PS00981_hap_h1
parent fiberSeqCompendium_PS00981_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02486 Hap1
longLabel HG02486 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00981_hap_h2
parent fiberSeqCompendium_PS00981_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02486 Hap2
longLabel HG02486 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00982_acc
+ track fiberSeqCompendium_PS00981_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00982/all.percent.accessible.bw
- shortLabel HG02559 Acc
- longLabel HG02559 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.combined.bw
+ shortLabel HG02486 CpG
+ longLabel HG02486 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 214
- track fiberSeqCompendium_PS00982_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS00982/fire-peaks.ucsc.bb
- shortLabel HG02559 Peaks
- longLabel HG02559 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HG02559 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS00982_hap
+ track fiberSeqCompendium_PS00981_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02486 CpG Hap1/2
+ longLabel HG02486 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 215
+
+ track fiberSeqCompendium_PS00981_cpgHap_h1
+ parent fiberSeqCompendium_PS00981_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02486 Hap1
+ longLabel HG02486 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00981_cpgHap_h2
+ parent fiberSeqCompendium_PS00981_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02486 Hap2
+ longLabel HG02486 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00981_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02486 CpG diff
+ longLabel HG02486 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 216
+
+ track fiberSeqCompendium_PS00981_cpgDiff_l0
+ parent fiberSeqCompendium_PS00981_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02486 All
+ longLabel HG02486 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00981_cpgDiff_l1
+ parent fiberSeqCompendium_PS00981_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02486 p < 0.01
+ longLabel HG02486 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00981_cpgDiff_l2
+ parent fiberSeqCompendium_PS00981_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02486 p < 0.001
+ longLabel HG02486 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00981_cpgDiff_l3
+ parent fiberSeqCompendium_PS00981_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02486 p < 0.0001
+ longLabel HG02486 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS00982_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/all.percent.accessible.bw
+ shortLabel HG02559 Acc
+ longLabel HG02559 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 221
+
+ track fiberSeqCompendium_PS00982_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/fire-peaks.ucsc.bb
+ shortLabel HG02559 Peaks
+ longLabel HG02559 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver HG02559 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 222
+
+ track fiberSeqCompendium_PS00982_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02559 Hap1/2
longLabel HG02559 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 223
track fiberSeqCompendium_PS00982_hap_h1
parent fiberSeqCompendium_PS00982_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02559 Hap1
longLabel HG02559 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00982_hap_h2
parent fiberSeqCompendium_PS00982_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02559 Hap2
longLabel HG02559 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00982_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.combined.bw
+ shortLabel HG02559 CpG
+ longLabel HG02559 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 224
+
+ track fiberSeqCompendium_PS00982_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02559 CpG Hap1/2
+ longLabel HG02559 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 225
+
+ track fiberSeqCompendium_PS00982_cpgHap_h1
+ parent fiberSeqCompendium_PS00982_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02559 Hap1
+ longLabel HG02559 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00982_cpgHap_h2
+ parent fiberSeqCompendium_PS00982_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02559 Hap2
+ longLabel HG02559 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00982_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02559 CpG diff
+ longLabel HG02559 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 226
+
+ track fiberSeqCompendium_PS00982_cpgDiff_l0
+ parent fiberSeqCompendium_PS00982_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02559 All
+ longLabel HG02559 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00982_cpgDiff_l1
+ parent fiberSeqCompendium_PS00982_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02559 p < 0.01
+ longLabel HG02559 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00982_cpgDiff_l2
+ parent fiberSeqCompendium_PS00982_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02559 p < 0.001
+ longLabel HG02559 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00982_cpgDiff_l3
+ parent fiberSeqCompendium_PS00982_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02559 p < 0.0001
+ longLabel HG02559 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00983_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/all.percent.accessible.bw
shortLabel HG02572 Acc
longLabel HG02572 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 231
track fiberSeqCompendium_PS00983_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/fire-peaks.ucsc.bb
shortLabel HG02572 Peaks
longLabel HG02572 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02572 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 232
track fiberSeqCompendium_PS00983_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02572 Hap1/2
longLabel HG02572 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 233
track fiberSeqCompendium_PS00983_hap_h1
parent fiberSeqCompendium_PS00983_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02572 Hap1
longLabel HG02572 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00983_hap_h2
parent fiberSeqCompendium_PS00983_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02572 Hap2
longLabel HG02572 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00983_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.combined.bw
+ shortLabel HG02572 CpG
+ longLabel HG02572 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 234
+
+ track fiberSeqCompendium_PS00983_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02572 CpG Hap1/2
+ longLabel HG02572 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 235
+
+ track fiberSeqCompendium_PS00983_cpgHap_h1
+ parent fiberSeqCompendium_PS00983_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02572 Hap1
+ longLabel HG02572 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00983_cpgHap_h2
+ parent fiberSeqCompendium_PS00983_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02572 Hap2
+ longLabel HG02572 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00983_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02572 CpG diff
+ longLabel HG02572 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 236
+
+ track fiberSeqCompendium_PS00983_cpgDiff_l0
+ parent fiberSeqCompendium_PS00983_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02572 All
+ longLabel HG02572 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00983_cpgDiff_l1
+ parent fiberSeqCompendium_PS00983_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02572 p < 0.01
+ longLabel HG02572 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00983_cpgDiff_l2
+ parent fiberSeqCompendium_PS00983_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02572 p < 0.001
+ longLabel HG02572 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00983_cpgDiff_l3
+ parent fiberSeqCompendium_PS00983_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02572 p < 0.0001
+ longLabel HG02572 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00984_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/all.percent.accessible.bw
shortLabel HG02717 Acc
longLabel HG02717 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 241
track fiberSeqCompendium_PS00984_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/fire-peaks.ucsc.bb
shortLabel HG02717 Peaks
longLabel HG02717 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02717 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 242
track fiberSeqCompendium_PS00984_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02717 Hap1/2
longLabel HG02717 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 243
track fiberSeqCompendium_PS00984_hap_h1
parent fiberSeqCompendium_PS00984_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02717 Hap1
longLabel HG02717 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00984_hap_h2
parent fiberSeqCompendium_PS00984_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02717 Hap2
longLabel HG02717 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00985_acc
+ track fiberSeqCompendium_PS00984_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00985/all.percent.accessible.bw
- shortLabel HG02886 Acc
- longLabel HG02886 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.combined.bw
+ shortLabel HG02717 CpG
+ longLabel HG02717 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 244
- track fiberSeqCompendium_PS00985_peaks
+ track fiberSeqCompendium_PS00984_cpgHap
parent fiberSeqCompendium off
- type bigNarrowPeak
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02717 CpG Hap1/2
+ longLabel HG02717 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 245
+
+ track fiberSeqCompendium_PS00984_cpgHap_h1
+ parent fiberSeqCompendium_PS00984_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02717 Hap1
+ longLabel HG02717 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00984_cpgHap_h2
+ parent fiberSeqCompendium_PS00984_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02717 Hap2
+ longLabel HG02717 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00984_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02717 CpG diff
+ longLabel HG02717 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 246
+
+ track fiberSeqCompendium_PS00984_cpgDiff_l0
+ parent fiberSeqCompendium_PS00984_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02717 All
+ longLabel HG02717 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00984_cpgDiff_l1
+ parent fiberSeqCompendium_PS00984_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02717 p < 0.01
+ longLabel HG02717 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00984_cpgDiff_l2
+ parent fiberSeqCompendium_PS00984_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02717 p < 0.001
+ longLabel HG02717 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00984_cpgDiff_l3
+ parent fiberSeqCompendium_PS00984_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02717 p < 0.0001
+ longLabel HG02717 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS00985_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/all.percent.accessible.bw
+ shortLabel HG02886 Acc
+ longLabel HG02886 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 251
+
+ track fiberSeqCompendium_PS00985_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/fire-peaks.ucsc.bb
shortLabel HG02886 Peaks
longLabel HG02886 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02886 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 252
track fiberSeqCompendium_PS00985_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02886 Hap1/2
longLabel HG02886 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 253
track fiberSeqCompendium_PS00985_hap_h1
parent fiberSeqCompendium_PS00985_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02886 Hap1
longLabel HG02886 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00985_hap_h2
parent fiberSeqCompendium_PS00985_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02886 Hap2
longLabel HG02886 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00985_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.combined.bw
+ shortLabel HG02886 CpG
+ longLabel HG02886 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 254
+
+ track fiberSeqCompendium_PS00985_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG02886 CpG Hap1/2
+ longLabel HG02886 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 255
+
+ track fiberSeqCompendium_PS00985_cpgHap_h1
+ parent fiberSeqCompendium_PS00985_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG02886 Hap1
+ longLabel HG02886 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00985_cpgHap_h2
+ parent fiberSeqCompendium_PS00985_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG02886 Hap2
+ longLabel HG02886 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00985_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG02886 CpG diff
+ longLabel HG02886 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 256
+
+ track fiberSeqCompendium_PS00985_cpgDiff_l0
+ parent fiberSeqCompendium_PS00985_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG02886 All
+ longLabel HG02886 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00985_cpgDiff_l1
+ parent fiberSeqCompendium_PS00985_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG02886 p < 0.01
+ longLabel HG02886 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00985_cpgDiff_l2
+ parent fiberSeqCompendium_PS00985_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG02886 p < 0.001
+ longLabel HG02886 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00985_cpgDiff_l3
+ parent fiberSeqCompendium_PS00985_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG02886 p < 0.0001
+ longLabel HG02886 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00986_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/all.percent.accessible.bw
shortLabel HG03516 Acc
longLabel HG03516 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 261
track fiberSeqCompendium_PS00986_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/fire-peaks.ucsc.bb
shortLabel HG03516 Peaks
longLabel HG03516 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG03516 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 262
track fiberSeqCompendium_PS00986_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG03516 Hap1/2
longLabel HG03516 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 263
track fiberSeqCompendium_PS00986_hap_h1
parent fiberSeqCompendium_PS00986_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG03516 Hap1
longLabel HG03516 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00986_hap_h2
parent fiberSeqCompendium_PS00986_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG03516 Hap2
longLabel HG03516 Fiber-seq percent accessible, haplotype 2
+ track fiberSeqCompendium_PS00986_cpg
+ parent fiberSeqCompendium off
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.combined.bw
+ shortLabel HG03516 CpG
+ longLabel HG03516 CpG methylation, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 264
+
+ track fiberSeqCompendium_PS00986_cpgHap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction mean
+ maxHeightPixels 100:40:8
+ shortLabel HG03516 CpG Hap1/2
+ longLabel HG03516 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 265
+
+ track fiberSeqCompendium_PS00986_cpgHap_h1
+ parent fiberSeqCompendium_PS00986_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.hap1.bw
+ color 0,114,178
+ shortLabel HG03516 Hap1
+ longLabel HG03516 CpG methylation, haplotype 1
+
+ track fiberSeqCompendium_PS00986_cpgHap_h2
+ parent fiberSeqCompendium_PS00986_cpgHap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.hap2.bw
+ color 213,94,0
+ shortLabel HG03516 Hap2
+ longLabel HG03516 CpG methylation, haplotype 2
+
+ track fiberSeqCompendium_PS00986_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG03516 CpG diff
+ longLabel HG03516 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 266
+
+ track fiberSeqCompendium_PS00986_cpgDiff_l0
+ parent fiberSeqCompendium_PS00986_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG03516 All
+ longLabel HG03516 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00986_cpgDiff_l1
+ parent fiberSeqCompendium_PS00986_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG03516 p < 0.01
+ longLabel HG03516 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00986_cpgDiff_l2
+ parent fiberSeqCompendium_PS00986_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG03516 p < 0.001
+ longLabel HG03516 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00986_cpgDiff_l3
+ parent fiberSeqCompendium_PS00986_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG03516 p < 0.0001
+ longLabel HG03516 CpG haplotype difference, p < 0.0001
+
track fiberSeqCompendium_PS00987_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/all.percent.accessible.bw
shortLabel HG03804 Acc
longLabel HG03804 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 271
track fiberSeqCompendium_PS00987_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/fire-peaks.ucsc.bb
shortLabel HG03804 Peaks
longLabel HG03804 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG03804 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 272
track fiberSeqCompendium_PS00987_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG03804 Hap1/2
longLabel HG03804 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 273
track fiberSeqCompendium_PS00987_hap_h1
parent fiberSeqCompendium_PS00987_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG03804 Hap1
longLabel HG03804 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00987_hap_h2
parent fiberSeqCompendium_PS00987_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG03804 Hap2
longLabel HG03804 Fiber-seq percent accessible, haplotype 2
- track fiberSeqCompendium_PS00988_acc
+ track fiberSeqCompendium_PS00987_cpg
parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00988/all.percent.accessible.bw
- shortLabel HG03942 Acc
- longLabel HG03942 Fiber-seq percent accessible, both haplotypes
+ type bigWig 0 100
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.combined.bw
+ shortLabel HG03804 CpG
+ longLabel HG03804 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 274
- track fiberSeqCompendium_PS00988_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS00988/fire-peaks.ucsc.bb
- shortLabel HG03942 Peaks
- longLabel HG03942 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HG03942 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS00988_hap
+ track fiberSeqCompendium_PS00987_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel HG03942 Hap1/2
- longLabel HG03942 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS00988_hap_h1
- parent fiberSeqCompendium_PS00988_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel HG03942 Hap1
- longLabel HG03942 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS00988_hap_h2
- parent fiberSeqCompendium_PS00988_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel HG03942 Hap2
- longLabel HG03942 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS00989_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00989/all.percent.accessible.bw
- shortLabel HG04160 Acc
- longLabel HG04160 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS00989_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS00989/fire-peaks.ucsc.bb
- shortLabel HG04160 Peaks
- longLabel HG04160 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HG04160 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS00989_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
+ windowingFunction mean
maxHeightPixels 100:40:8
- shortLabel HG04160 Hap1/2
- longLabel HG04160 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ shortLabel HG03804 CpG Hap1/2
+ longLabel HG03804 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 275
- track fiberSeqCompendium_PS00989_hap_h1
- parent fiberSeqCompendium_PS00989_hap
+ track fiberSeqCompendium_PS00987_cpgHap_h1
+ parent fiberSeqCompendium_PS00987_cpgHap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap1.percent.accessible.bw
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap1.bw
color 0,114,178
- shortLabel HG04160 Hap1
- longLabel HG04160 Fiber-seq percent accessible, haplotype 1
+ shortLabel HG03804 Hap1
+ longLabel HG03804 CpG methylation, haplotype 1
- track fiberSeqCompendium_PS00989_hap_h2
- parent fiberSeqCompendium_PS00989_hap
+ track fiberSeqCompendium_PS00987_cpgHap_h2
+ parent fiberSeqCompendium_PS00987_cpgHap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap2.percent.accessible.bw
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap2.bw
color 213,94,0
- shortLabel HG04160 Hap2
- longLabel HG04160 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS00990_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/all.percent.accessible.bw
- shortLabel HG04187 Acc
- longLabel HG04187 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS00990_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/fire-peaks.ucsc.bb
- shortLabel HG04187 Peaks
- longLabel HG04187 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HG04187 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
+ shortLabel HG03804 Hap2
+ longLabel HG03804 CpG methylation, haplotype 2
- track fiberSeqCompendium_PS00990_hap
+ track fiberSeqCompendium_PS00987_cpgDiff
parent fiberSeqCompendium off
container multiWig
- aggregate transparentOverlay
+ aggregate solidOverlay
showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
+ type bigWig -100 100
+ viewLimits -100:100
autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel HG04187 Hap1/2
- longLabel HG04187 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG03804 CpG diff
+ longLabel HG03804 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 276
- track fiberSeqCompendium_PS00990_hap_h1
- parent fiberSeqCompendium_PS00990_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel HG04187 Hap1
- longLabel HG04187 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS00990_hap_h2
- parent fiberSeqCompendium_PS00990_hap
+ track fiberSeqCompendium_PS00987_cpgDiff_l0
+ parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel HG04187 Hap2
- longLabel HG04187 Fiber-seq percent accessible, haplotype 2
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG03804 All
+ longLabel HG03804 CpG haplotype difference, All
- track fiberSeqCompendium_PS01302_acc
- parent fiberSeqCompendium off
+ track fiberSeqCompendium_PS00987_cpgDiff_l1
+ parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01302/all.percent.accessible.bw
- shortLabel A549 Acc
- longLabel A549 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01302_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01302/fire-peaks.ucsc.bb
- shortLabel A549 Peaks
- longLabel A549 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver A549 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01302_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel A549 Hap1/2
- longLabel A549 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG03804 p < 0.01
+ longLabel HG03804 CpG haplotype difference, p < 0.01
- track fiberSeqCompendium_PS01302_hap_h1
- parent fiberSeqCompendium_PS01302_hap
+ track fiberSeqCompendium_PS00987_cpgDiff_l2
+ parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel A549 Hap1
- longLabel A549 Fiber-seq percent accessible, haplotype 1
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG03804 p < 0.001
+ longLabel HG03804 CpG haplotype difference, p < 0.001
- track fiberSeqCompendium_PS01302_hap_h2
- parent fiberSeqCompendium_PS01302_hap
+ track fiberSeqCompendium_PS00987_cpgDiff_l3
+ parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel A549 Hap2
- longLabel A549 Fiber-seq percent accessible, haplotype 2
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG03804 p < 0.0001
+ longLabel HG03804 CpG haplotype difference, p < 0.0001
- track fiberSeqCompendium_PS01305_acc
+ track fiberSeqCompendium_PS00988_acc
parent fiberSeqCompendium off
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01305/all.percent.accessible.bw
- shortLabel MCF-7 Acc
- longLabel MCF-7 Fiber-seq percent accessible, both haplotypes
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00988/all.percent.accessible.bw
+ shortLabel HG03942 Acc
+ longLabel HG03942 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 281
- track fiberSeqCompendium_PS01305_peaks
+ track fiberSeqCompendium_PS00988_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01305/fire-peaks.ucsc.bb
- shortLabel MCF-7 Peaks
- longLabel MCF-7 Fiber-seq FIRE peaks
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00988/fire-peaks.ucsc.bb
+ shortLabel HG03942 Peaks
+ longLabel HG03942 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
- mouseOver MCF-7 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ mouseOver HG03942 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
+ priority 282
- track fiberSeqCompendium_PS01305_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel MCF-7 Hap1/2
- longLabel MCF-7 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01305_hap_h1
- parent fiberSeqCompendium_PS01305_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel MCF-7 Hap1
- longLabel MCF-7 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01305_hap_h2
- parent fiberSeqCompendium_PS01305_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel MCF-7 Hap2
- longLabel MCF-7 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01314_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/all.percent.accessible.bw
- shortLabel HCT116 Acc
- longLabel HCT116 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01314_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/fire-peaks.ucsc.bb
- shortLabel HCT116 Peaks
- longLabel HCT116 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver HCT116 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01314_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel HCT116 Hap1/2
- longLabel HCT116 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01314_hap_h1
- parent fiberSeqCompendium_PS01314_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel HCT116 Hap1
- longLabel HCT116 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01314_hap_h2
- parent fiberSeqCompendium_PS01314_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel HCT116 Hap2
- longLabel HCT116 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01319_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01319/all.percent.accessible.bw
- shortLabel Caco-2 Acc
- longLabel Caco-2 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01319_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01319/fire-peaks.ucsc.bb
- shortLabel Caco-2 Peaks
- longLabel Caco-2 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver Caco-2 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01319_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel Caco-2 Hap1/2
- longLabel Caco-2 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01319_hap_h1
- parent fiberSeqCompendium_PS01319_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel Caco-2 Hap1
- longLabel Caco-2 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01319_hap_h2
- parent fiberSeqCompendium_PS01319_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel Caco-2 Hap2
- longLabel Caco-2 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01388_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01388/all.percent.accessible.bw
- shortLabel WTC-11 Acc
- longLabel WTC-11 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01388_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01388/fire-peaks.ucsc.bb
- shortLabel WTC-11 Peaks
- longLabel WTC-11 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver WTC-11 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01388_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel WTC-11 Hap1/2
- longLabel WTC-11 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01388_hap_h1
- parent fiberSeqCompendium_PS01388_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel WTC-11 Hap1
- longLabel WTC-11 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01388_hap_h2
- parent fiberSeqCompendium_PS01388_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel WTC-11 Hap2
- longLabel WTC-11 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01517_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/all.percent.accessible.bw
- shortLabel GM28572 Acc
- longLabel GM28572 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01517_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/fire-peaks.ucsc.bb
- shortLabel GM28572 Peaks
- longLabel GM28572 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver GM28572 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01517_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel GM28572 Hap1/2
- longLabel GM28572 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01517_hap_h1
- parent fiberSeqCompendium_PS01517_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel GM28572 Hap1
- longLabel GM28572 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01517_hap_h2
- parent fiberSeqCompendium_PS01517_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel GM28572 Hap2
- longLabel GM28572 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01518_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01518/all.percent.accessible.bw
- shortLabel GM28570 Acc
- longLabel GM28570 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01518_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01518/fire-peaks.ucsc.bb
- shortLabel GM28570 Peaks
- longLabel GM28570 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver GM28570 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01518_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel GM28570 Hap1/2
- longLabel GM28570 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01518_hap_h1
- parent fiberSeqCompendium_PS01518_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel GM28570 Hap1
- longLabel GM28570 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01518_hap_h2
- parent fiberSeqCompendium_PS01518_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel GM28570 Hap2
- longLabel GM28570 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01519_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01519/all.percent.accessible.bw
- shortLabel GM25456 Acc
- longLabel GM25456 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01519_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01519/fire-peaks.ucsc.bb
- shortLabel GM25456 Peaks
- longLabel GM25456 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver GM25456 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01519_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel GM25456 Hap1/2
- longLabel GM25456 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01519_hap_h1
- parent fiberSeqCompendium_PS01519_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel GM25456 Hap1
- longLabel GM25456 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01519_hap_h2
- parent fiberSeqCompendium_PS01519_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel GM25456 Hap2
- longLabel GM25456 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01520_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01520/all.percent.accessible.bw
- shortLabel GM25455 Acc
- longLabel GM25455 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01520_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01520/fire-peaks.ucsc.bb
- shortLabel GM25455 Peaks
- longLabel GM25455 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver GM25455 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01520_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel GM25455 Hap1/2
- longLabel GM25455 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01520_hap_h1
- parent fiberSeqCompendium_PS01520_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel GM25455 Hap1
- longLabel GM25455 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01520_hap_h2
- parent fiberSeqCompendium_PS01520_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel GM25455 Hap2
- longLabel GM25455 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqCompendium_PS01524_acc
- parent fiberSeqCompendium off
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01524/all.percent.accessible.bw
- shortLabel GM27730 Acc
- longLabel GM27730 Fiber-seq percent accessible, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- alwaysZero on
- graphTypeDefault bar
- windowingFunction maximum
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqCompendium_PS01524_peaks
- parent fiberSeqCompendium off
- type bigNarrowPeak
- bigDataUrl /gbdb/hg38/fiberSeq/PS01524/fire-peaks.ucsc.bb
- shortLabel GM27730 Peaks
- longLabel GM27730 Fiber-seq FIRE peaks
- signalFilter 0
- signalFilterLimits 0:100
- qValueFilter 0
- qValueFilterLimits 0:100
- scoreFilter 0
- scoreFilterLimits 0:1000
- mouseOver GM27730 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
- onlyVisibility dense
-
- track fiberSeqCompendium_PS01524_hap
- parent fiberSeqCompendium off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- alwaysZero on
- windowingFunction maximum
- maxHeightPixels 100:40:8
- shortLabel GM27730 Hap1/2
- longLabel GM27730 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqCompendium_PS01524_hap_h1
- parent fiberSeqCompendium_PS01524_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap1.percent.accessible.bw
- color 0,114,178
- shortLabel GM27730 Hap1
- longLabel GM27730 Fiber-seq percent accessible, haplotype 1
-
- track fiberSeqCompendium_PS01524_hap_h2
- parent fiberSeqCompendium_PS01524_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap2.percent.accessible.bw
- color 213,94,0
- shortLabel GM27730 Hap2
- longLabel GM27730 Fiber-seq percent accessible, haplotype 2
-
- track fiberSeqMeth
- parent fiberSeq
- compositeTrack faceted
- type bigWig
- shortLabel Methylation
- longLabel CpG methylation from Fiber-seq reads, combined and by haplotype, in 41 samples
- metaDataUrl /gbdb/hg38/fiberSeq/fiberSeqMeth_metadata.tsv
- colorSettingsUrl /gbdb/hg38/fiberSeq/fiberSeqMeth_colors.json
- primaryKey accession
- dataTypes comb|"Combined CpG" hap|"Hap1/Hap2 CpG" diffs|"Haplotype differences"
- defaultSortField accession
- maxCheckboxes 50
- noInherit on
- visibility hide
- priority 3
-
- track fiberSeqMeth_PM00001_comb
- parent fiberSeqMeth on
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.combined.bw
- shortLabel GM12878 CpG
- longLabel GM12878 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00001_hap
- parent fiberSeqMeth off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- shortLabel GM12878 CpG Hap1/2
- longLabel GM12878 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00001_hap_h1
- parent fiberSeqMeth_PM00001_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap1.bw
- color 0,114,178
- shortLabel GM12878 CpG Hap1
- longLabel GM12878 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00001_hap_h2
- parent fiberSeqMeth_PM00001_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap2.bw
- color 213,94,0
- shortLabel GM12878 CpG Hap2
- longLabel GM12878 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00001_diffs
- parent fiberSeqMeth off
- container multiWig
- aggregate solidOverlay
- showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel GM12878 CpG diffs
- longLabel GM12878 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00001_diffs_l0
- parent fiberSeqMeth_PM00001_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_all.bw
- color 137,143,143
- shortLabel GM12878 All
- longLabel GM12878 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00001_diffs_l1
- parent fiberSeqMeth_PM00001_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel GM12878 p < 0.01
- longLabel GM12878 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00001_diffs_l2
- parent fiberSeqMeth_PM00001_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel GM12878 p < 0.001
- longLabel GM12878 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00001_diffs_l3
- parent fiberSeqMeth_PM00001_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel GM12878 p < 0.0001
- longLabel GM12878 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00002_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.combined.bw
- shortLabel HG002 CpG
- longLabel HG002 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00002_hap
- parent fiberSeqMeth off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- shortLabel HG002 CpG Hap1/2
- longLabel HG002 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00002_hap_h1
- parent fiberSeqMeth_PM00002_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap1.bw
- color 0,114,178
- shortLabel HG002 CpG Hap1
- longLabel HG002 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00002_hap_h2
- parent fiberSeqMeth_PM00002_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap2.bw
- color 213,94,0
- shortLabel HG002 CpG Hap2
- longLabel HG002 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00002_diffs
- parent fiberSeqMeth off
- container multiWig
- aggregate solidOverlay
- showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel HG002 CpG diffs
- longLabel HG002 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00002_diffs_l0
- parent fiberSeqMeth_PM00002_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_all.bw
- color 137,143,143
- shortLabel HG002 All
- longLabel HG002 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00002_diffs_l1
- parent fiberSeqMeth_PM00002_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG002 p < 0.01
- longLabel HG002 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00002_diffs_l2
- parent fiberSeqMeth_PM00002_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HG002 p < 0.001
- longLabel HG002 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00002_diffs_l3
- parent fiberSeqMeth_PM00002_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HG002 p < 0.0001
- longLabel HG002 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00004_comb
- parent fiberSeqMeth on
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.combined.bw
- shortLabel K562 CpG
- longLabel K562 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00004_hap
- parent fiberSeqMeth off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- shortLabel K562 CpG Hap1/2
- longLabel K562 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00004_hap_h1
- parent fiberSeqMeth_PM00004_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap1.bw
- color 0,114,178
- shortLabel K562 CpG Hap1
- longLabel K562 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00004_hap_h2
- parent fiberSeqMeth_PM00004_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap2.bw
- color 213,94,0
- shortLabel K562 CpG Hap2
- longLabel K562 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00004_diffs
- parent fiberSeqMeth off
- container multiWig
- aggregate solidOverlay
- showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel K562 CpG diffs
- longLabel K562 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00004_diffs_l0
- parent fiberSeqMeth_PM00004_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_all.bw
- color 137,143,143
- shortLabel K562 All
- longLabel K562 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00004_diffs_l1
- parent fiberSeqMeth_PM00004_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel K562 p < 0.01
- longLabel K562 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00004_diffs_l2
- parent fiberSeqMeth_PM00004_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel K562 p < 0.001
- longLabel K562 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00004_diffs_l3
- parent fiberSeqMeth_PM00004_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel K562 p < 0.0001
- longLabel K562 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00005_comb
- parent fiberSeqMeth on
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.combined.bw
- shortLabel HepG2 CpG
- longLabel HepG2 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00005_hap
- parent fiberSeqMeth off
- container multiWig
- aggregate transparentOverlay
- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- shortLabel HepG2 CpG Hap1/2
- longLabel HepG2 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00005_hap_h1
- parent fiberSeqMeth_PM00005_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap1.bw
- color 0,114,178
- shortLabel HepG2 CpG Hap1
- longLabel HepG2 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00005_hap_h2
- parent fiberSeqMeth_PM00005_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap2.bw
- color 213,94,0
- shortLabel HepG2 CpG Hap2
- longLabel HepG2 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00005_diffs
- parent fiberSeqMeth off
- container multiWig
- aggregate solidOverlay
- showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel HepG2 CpG diffs
- longLabel HepG2 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00005_diffs_l0
- parent fiberSeqMeth_PM00005_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_all.bw
- color 137,143,143
- shortLabel HepG2 All
- longLabel HepG2 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00005_diffs_l1
- parent fiberSeqMeth_PM00005_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HepG2 p < 0.01
- longLabel HepG2 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00005_diffs_l2
- parent fiberSeqMeth_PM00005_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HepG2 p < 0.001
- longLabel HepG2 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00005_diffs_l3
- parent fiberSeqMeth_PM00005_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.0001.bw
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- shortLabel HepG2 p < 0.0001
- longLabel HepG2 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00006_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.combined.bw
- shortLabel Panc1 CpG
- longLabel Panc1 CpG methylation, both haplotypes
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- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00006_hap
- parent fiberSeqMeth off
- container multiWig
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- type bigWig 0 100
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- windowingFunction mean
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- shortLabel Panc1 CpG Hap1/2
- longLabel Panc1 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00006_hap_h1
- parent fiberSeqMeth_PM00006_hap
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- color 0,114,178
- shortLabel Panc1 CpG Hap1
- longLabel Panc1 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00006_hap_h2
- parent fiberSeqMeth_PM00006_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.hap2.bw
- color 213,94,0
- shortLabel Panc1 CpG Hap2
- longLabel Panc1 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00006_diffs
- parent fiberSeqMeth off
- container multiWig
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- type bigWig -100 100
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- maxHeightPixels 100:50:8
- shortLabel Panc1 CpG diffs
- longLabel Panc1 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00006_diffs_l0
- parent fiberSeqMeth_PM00006_diffs
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- shortLabel Panc1 All
- longLabel Panc1 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00006_diffs_l1
- parent fiberSeqMeth_PM00006_diffs
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- color 235,229,52
- shortLabel Panc1 p < 0.01
- longLabel Panc1 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00006_diffs_l2
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- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel Panc1 p < 0.001
- longLabel Panc1 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00006_diffs_l3
- parent fiberSeqMeth_PM00006_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel Panc1 p < 0.0001
- longLabel Panc1 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00007_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.combined.bw
- shortLabel THP-1 CpG
- longLabel THP-1 CpG methylation, both haplotypes
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- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00007_hap
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- shortLabel THP-1 CpG Hap1/2
- longLabel THP-1 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00007_hap_h1
- parent fiberSeqMeth_PM00007_hap
- type bigWig
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- color 0,114,178
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- longLabel THP-1 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00007_hap_h2
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- type bigWig
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- color 213,94,0
- shortLabel THP-1 CpG Hap2
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-
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- longLabel THP-1 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00007_diffs_l0
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- color 137,143,143
- shortLabel THP-1 All
- longLabel THP-1 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00007_diffs_l1
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- color 235,229,52
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- longLabel THP-1 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00007_diffs_l2
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- color 245,148,22
- shortLabel THP-1 p < 0.001
- longLabel THP-1 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00007_diffs_l3
- parent fiberSeqMeth_PM00007_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel THP-1 p < 0.0001
- longLabel THP-1 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00008_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.combined.bw
- shortLabel Hap1 CpG
- longLabel Hap1 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00008_hap
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- shortLabel Hap1 CpG Hap1/2
- longLabel Hap1 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00008_hap_h1
- parent fiberSeqMeth_PM00008_hap
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- shortLabel Hap1 CpG Hap1
- longLabel Hap1 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00008_hap_h2
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- color 213,94,0
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-
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- onlyVisibility full
-
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- longLabel Hap1 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00008_diffs_l1
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- type bigWig
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- color 235,229,52
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- longLabel Hap1 CpG haplotype difference, p < 0.01
-
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- shortLabel Hap1 p < 0.001
- longLabel Hap1 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00008_diffs_l3
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel Hap1 p < 0.0001
- longLabel Hap1 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00009_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.combined.bw
- shortLabel Jurkat CpG
- longLabel Jurkat CpG methylation, both haplotypes
- color 0,0,0
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- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
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- container multiWig
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- longLabel Jurkat CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00009_hap_h1
- parent fiberSeqMeth_PM00009_hap
- type bigWig
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- color 0,114,178
- shortLabel Jurkat CpG Hap1
- longLabel Jurkat CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00009_hap_h2
- parent fiberSeqMeth_PM00009_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.hap2.bw
- color 213,94,0
- shortLabel Jurkat CpG Hap2
- longLabel Jurkat CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00009_diffs
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- onlyVisibility full
-
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_all.bw
- color 137,143,143
- shortLabel Jurkat All
- longLabel Jurkat CpG haplotype difference, All
-
- track fiberSeqMeth_PM00009_diffs_l1
- parent fiberSeqMeth_PM00009_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel Jurkat p < 0.01
- longLabel Jurkat CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00009_diffs_l2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel Jurkat p < 0.001
- longLabel Jurkat CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00009_diffs_l3
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel Jurkat p < 0.0001
- longLabel Jurkat CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00010_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.combined.bw
- shortLabel H1 CpG
- longLabel H1 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
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- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00010_hap
- parent fiberSeqMeth off
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- maxHeightPixels 100:40:8
- shortLabel H1 CpG Hap1/2
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- onlyVisibility full
-
- track fiberSeqMeth_PM00010_hap_h1
- parent fiberSeqMeth_PM00010_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap1.bw
- color 0,114,178
- shortLabel H1 CpG Hap1
- longLabel H1 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00010_hap_h2
- parent fiberSeqMeth_PM00010_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap2.bw
- color 213,94,0
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-
- track fiberSeqMeth_PM00010_diffs
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- maxHeightPixels 100:50:8
- shortLabel H1 CpG diffs
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- onlyVisibility full
-
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- parent fiberSeqMeth_PM00010_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_all.bw
- color 137,143,143
- shortLabel H1 All
- longLabel H1 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00010_diffs_l1
- parent fiberSeqMeth_PM00010_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel H1 p < 0.01
- longLabel H1 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00010_diffs_l2
- parent fiberSeqMeth_PM00010_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel H1 p < 0.001
- longLabel H1 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00010_diffs_l3
- parent fiberSeqMeth_PM00010_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel H1 p < 0.0001
- longLabel H1 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00011_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.combined.bw
- shortLabel H9 CpG
- longLabel H9 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00011_hap
- parent fiberSeqMeth off
- container multiWig
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- type bigWig 0 100
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- windowingFunction mean
- maxHeightPixels 100:40:8
- shortLabel H9 CpG Hap1/2
- longLabel H9 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00011_hap_h1
- parent fiberSeqMeth_PM00011_hap
- type bigWig
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- color 0,114,178
- shortLabel H9 CpG Hap1
- longLabel H9 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00011_hap_h2
- parent fiberSeqMeth_PM00011_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.hap2.bw
- color 213,94,0
- shortLabel H9 CpG Hap2
- longLabel H9 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00011_diffs
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- type bigWig -100 100
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- maxHeightPixels 100:50:8
- shortLabel H9 CpG diffs
- longLabel H9 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00011_diffs_l0
- parent fiberSeqMeth_PM00011_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_all.bw
- color 137,143,143
- shortLabel H9 All
- longLabel H9 CpG haplotype difference, All
-
- track fiberSeqMeth_PM00011_diffs_l1
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel H9 p < 0.01
- longLabel H9 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00011_diffs_l2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel H9 p < 0.001
- longLabel H9 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00011_diffs_l3
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel H9 p < 0.0001
- longLabel H9 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PM00012_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.combined.bw
- shortLabel Hek293T CpG
- longLabel Hek293T CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PM00012_hap
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- container multiWig
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- type bigWig 0 100
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- maxHeightPixels 100:40:8
- shortLabel Hek293T CpG Hap1/2
- longLabel Hek293T CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PM00012_hap_h1
- parent fiberSeqMeth_PM00012_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap1.bw
- color 0,114,178
- shortLabel Hek293T CpG Hap1
- longLabel Hek293T CpG methylation, haplotype 1
-
- track fiberSeqMeth_PM00012_hap_h2
- parent fiberSeqMeth_PM00012_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap2.bw
- color 213,94,0
- shortLabel Hek293T CpG Hap2
- longLabel Hek293T CpG methylation, haplotype 2
-
- track fiberSeqMeth_PM00012_diffs
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- container multiWig
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- type bigWig -100 100
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- maxHeightPixels 100:50:8
- shortLabel Hek293T CpG diffs
- longLabel Hek293T CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PM00012_diffs_l0
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- color 137,143,143
- shortLabel Hek293T All
- longLabel Hek293T CpG haplotype difference, All
-
- track fiberSeqMeth_PM00012_diffs_l1
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel Hek293T p < 0.01
- longLabel Hek293T CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PM00012_diffs_l2
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- type bigWig
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- color 245,148,22
- shortLabel Hek293T p < 0.001
- longLabel Hek293T CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PM00012_diffs_l3
- parent fiberSeqMeth_PM00012_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel Hek293T p < 0.0001
- longLabel Hek293T CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00971_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.combined.bw
- shortLabel HG01123 CpG
- longLabel HG01123 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PS00971_hap
- parent fiberSeqMeth off
- container multiWig
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- showSubtrackColorOnUi on
- type bigWig 0 100
- viewLimits 0:100
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- maxHeightPixels 100:40:8
- shortLabel HG01123 CpG Hap1/2
- longLabel HG01123 CpG methylation, haplotype 1 (blue) and 2 (orange)
- onlyVisibility full
-
- track fiberSeqMeth_PS00971_hap_h1
- parent fiberSeqMeth_PS00971_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap1.bw
- color 0,114,178
- shortLabel HG01123 CpG Hap1
- longLabel HG01123 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00971_hap_h2
- parent fiberSeqMeth_PS00971_hap
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap2.bw
- color 213,94,0
- shortLabel HG01123 CpG Hap2
- longLabel HG01123 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PS00971_diffs
- parent fiberSeqMeth off
- container multiWig
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- showSubtrackColorOnUi on
- type bigWig -100 100
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- maxHeightPixels 100:50:8
- shortLabel HG01123 CpG diffs
- longLabel HG01123 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PS00971_diffs_l0
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- longLabel HG01123 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00971_diffs_l1
- parent fiberSeqMeth_PS00971_diffs
- type bigWig
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- longLabel HG01123 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS00971_diffs_l2
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- type bigWig
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- shortLabel HG01123 p < 0.001
- longLabel HG01123 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00971_diffs_l3
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- type bigWig
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- shortLabel HG01123 p < 0.0001
- longLabel HG01123 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00972_comb
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- onlyVisibility full
-
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- onlyVisibility full
-
- track fiberSeqMeth_PS00972_hap_h1
- parent fiberSeqMeth_PS00972_hap
- type bigWig
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- longLabel HG01258 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00972_hap_h2
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- type bigWig
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- color 213,94,0
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- longLabel HG01258 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PS00972_diffs
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-
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-
- track fiberSeqMeth_PS00972_diffs_l1
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-
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- longLabel HG01258 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00972_diffs_l3
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- type bigWig
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- shortLabel HG01258 p < 0.0001
- longLabel HG01258 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00973_comb
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-
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- onlyVisibility full
-
- track fiberSeqMeth_PS00973_hap_h1
- parent fiberSeqMeth_PS00973_hap
- type bigWig
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- shortLabel HG01358 CpG Hap1
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-
- track fiberSeqMeth_PS00973_hap_h2
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-
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-
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-
- track fiberSeqMeth_PS00973_diffs_l1
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-
- track fiberSeqMeth_PS00973_diffs_l2
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- longLabel HG01358 CpG haplotype difference, p < 0.001
-
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- type bigWig
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- color 255,0,0
- shortLabel HG01358 p < 0.0001
- longLabel HG01358 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00974_comb
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- type bigWig 0 100
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-
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- onlyVisibility full
-
- track fiberSeqMeth_PS00974_hap_h1
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- type bigWig
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- color 0,114,178
- shortLabel HG01361 CpG Hap1
- longLabel HG01361 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00974_hap_h2
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- type bigWig
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- color 213,94,0
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-
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-
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- color 137,143,143
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-
- track fiberSeqMeth_PS00974_diffs_l1
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- type bigWig
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-
- track fiberSeqMeth_PS00974_diffs_l2
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-
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- color 255,0,0
- shortLabel HG01361 p < 0.0001
- longLabel HG01361 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00975_comb
- parent fiberSeqMeth off
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.combined.bw
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-
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- onlyVisibility full
-
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- color 0,114,178
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- longLabel HG01891 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00975_hap_h2
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- type bigWig
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- color 213,94,0
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-
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-
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- type bigWig
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- color 137,143,143
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- longLabel HG01891 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00975_diffs_l1
- parent fiberSeqMeth_PS00975_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG01891 p < 0.01
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-
- track fiberSeqMeth_PS00975_diffs_l2
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- type bigWig
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-
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- type bigWig
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-
- track fiberSeqMeth_PS00976_comb
- parent fiberSeqMeth off
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.combined.bw
- shortLabel HG02071 CpG
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- maxHeightPixels 100:40:8
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-
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- onlyVisibility full
-
- track fiberSeqMeth_PS00976_hap_h1
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- color 0,114,178
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- longLabel HG02071 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00976_hap_h2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.hap2.bw
- color 213,94,0
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- longLabel HG02071 CpG methylation, haplotype 2
-
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-
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- type bigWig
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- color 137,143,143
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- longLabel HG02071 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00976_diffs_l1
- parent fiberSeqMeth_PS00976_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG02071 p < 0.01
- longLabel HG02071 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS00976_diffs_l2
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- type bigWig
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- color 245,148,22
- shortLabel HG02071 p < 0.001
- longLabel HG02071 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00976_diffs_l3
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- type bigWig
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- color 255,0,0
- shortLabel HG02071 p < 0.0001
- longLabel HG02071 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00977_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.combined.bw
- shortLabel HG02074 CpG
- longLabel HG02074 CpG methylation, both haplotypes
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- maxHeightPixels 100:40:8
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-
- track fiberSeqMeth_PS00977_hap
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- onlyVisibility full
-
- track fiberSeqMeth_PS00977_hap_h1
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- type bigWig
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- color 0,114,178
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- longLabel HG02074 CpG methylation, haplotype 1
-
- track fiberSeqMeth_PS00977_hap_h2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.hap2.bw
- color 213,94,0
- shortLabel HG02074 CpG Hap2
- longLabel HG02074 CpG methylation, haplotype 2
-
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-
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- type bigWig
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- color 137,143,143
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- longLabel HG02074 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00977_diffs_l1
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG02074 p < 0.01
- longLabel HG02074 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS00977_diffs_l2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HG02074 p < 0.001
- longLabel HG02074 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00977_diffs_l3
- parent fiberSeqMeth_PS00977_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HG02074 p < 0.0001
- longLabel HG02074 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00978_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.combined.bw
- shortLabel HG02132 CpG
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- windowingFunction mean
- maxHeightPixels 100:40:8
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-
- track fiberSeqMeth_PS00978_hap
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-
- track fiberSeqMeth_PS00978_hap_h1
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- color 0,114,178
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-
- track fiberSeqMeth_PS00978_hap_h2
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- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.hap2.bw
- color 213,94,0
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-
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-
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- color 137,143,143
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- longLabel HG02132 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00978_diffs_l1
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.01.bw
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- shortLabel HG02132 p < 0.01
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-
- track fiberSeqMeth_PS00978_diffs_l2
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HG02132 p < 0.001
- longLabel HG02132 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00978_diffs_l3
- parent fiberSeqMeth_PS00978_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HG02132 p < 0.0001
- longLabel HG02132 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00979_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.combined.bw
- shortLabel HG02135 CpG
- longLabel HG02135 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PS00979_hap
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- container multiWig
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- onlyVisibility full
-
- track fiberSeqMeth_PS00979_hap_h1
- parent fiberSeqMeth_PS00979_hap
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
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-
- track fiberSeqMeth_PS00984_comb
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-
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-
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-
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-
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-
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-
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-
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-
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-
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.combined.bw
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-
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-
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-
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-
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-
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-
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-
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-
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-
- track fiberSeqMeth_PS00986_comb
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.combined.bw
- shortLabel HG03516 CpG
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- maxHeightPixels 100:40:8
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-
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-
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-
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-
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-
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-
- track fiberSeqMeth_PS00986_diffs_l1
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-
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-
- track fiberSeqMeth_PS00986_diffs_l3
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- bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.0001.bw
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- longLabel HG03516 CpG haplotype difference, p < 0.0001
-
- track fiberSeqMeth_PS00987_comb
- parent fiberSeqMeth off
- type bigWig 0 100
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.combined.bw
- shortLabel HG03804 CpG
- longLabel HG03804 CpG methylation, both haplotypes
- color 0,0,0
- viewLimits 0:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:40:8
- onlyVisibility full
-
- track fiberSeqMeth_PS00987_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00988_hap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
- windowingFunction mean
+ alwaysZero on
+ windowingFunction maximum
maxHeightPixels 100:40:8
- shortLabel HG03804 CpG Hap1/2
- longLabel HG03804 CpG methylation, haplotype 1 (blue) and 2 (orange)
+ shortLabel HG03942 Hap1/2
+ longLabel HG03942 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 283
- track fiberSeqMeth_PS00987_hap_h1
- parent fiberSeqMeth_PS00987_hap
+ track fiberSeqCompendium_PS00988_hap_h1
+ parent fiberSeqCompendium_PS00988_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap1.bw
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap1.percent.accessible.bw
color 0,114,178
- shortLabel HG03804 CpG Hap1
- longLabel HG03804 CpG methylation, haplotype 1
+ shortLabel HG03942 Hap1
+ longLabel HG03942 Fiber-seq percent accessible, haplotype 1
- track fiberSeqMeth_PS00987_hap_h2
- parent fiberSeqMeth_PS00987_hap
+ track fiberSeqCompendium_PS00988_hap_h2
+ parent fiberSeqCompendium_PS00988_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap2.bw
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap2.percent.accessible.bw
color 213,94,0
- shortLabel HG03804 CpG Hap2
- longLabel HG03804 CpG methylation, haplotype 2
-
- track fiberSeqMeth_PS00987_diffs
- parent fiberSeqMeth off
- container multiWig
- aggregate solidOverlay
- showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
- autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel HG03804 CpG diffs
- longLabel HG03804 CpG methylation difference between haplotypes, by significance threshold
- onlyVisibility full
-
- track fiberSeqMeth_PS00987_diffs_l0
- parent fiberSeqMeth_PS00987_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_all.bw
- color 137,143,143
- shortLabel HG03804 All
- longLabel HG03804 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00987_diffs_l1
- parent fiberSeqMeth_PS00987_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG03804 p < 0.01
- longLabel HG03804 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS00987_diffs_l2
- parent fiberSeqMeth_PS00987_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HG03804 p < 0.001
- longLabel HG03804 CpG haplotype difference, p < 0.001
-
- track fiberSeqMeth_PS00987_diffs_l3
- parent fiberSeqMeth_PS00987_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HG03804 p < 0.0001
- longLabel HG03804 CpG haplotype difference, p < 0.0001
+ shortLabel HG03942 Hap2
+ longLabel HG03942 Fiber-seq percent accessible, haplotype 2
- track fiberSeqMeth_PS00988_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00988_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.combined.bw
shortLabel HG03942 CpG
longLabel HG03942 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 284
- track fiberSeqMeth_PS00988_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00988_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG03942 CpG Hap1/2
longLabel HG03942 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 285
- track fiberSeqMeth_PS00988_hap_h1
- parent fiberSeqMeth_PS00988_hap
+ track fiberSeqCompendium_PS00988_cpgHap_h1
+ parent fiberSeqCompendium_PS00988_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.hap1.bw
color 0,114,178
- shortLabel HG03942 CpG Hap1
+ shortLabel HG03942 Hap1
longLabel HG03942 CpG methylation, haplotype 1
- track fiberSeqMeth_PS00988_hap_h2
- parent fiberSeqMeth_PS00988_hap
+ track fiberSeqCompendium_PS00988_cpgHap_h2
+ parent fiberSeqCompendium_PS00988_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.hap2.bw
color 213,94,0
- shortLabel HG03942 CpG Hap2
+ shortLabel HG03942 Hap2
longLabel HG03942 CpG methylation, haplotype 2
- track fiberSeqMeth_PS00988_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00988_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel HG03942 CpG diffs
+ shortLabel HG03942 CpG diff
longLabel HG03942 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 286
- track fiberSeqMeth_PS00988_diffs_l0
- parent fiberSeqMeth_PS00988_diffs
+ track fiberSeqCompendium_PS00988_cpgDiff_l0
+ parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_all.bw
color 137,143,143
shortLabel HG03942 All
longLabel HG03942 CpG haplotype difference, All
- track fiberSeqMeth_PS00988_diffs_l1
- parent fiberSeqMeth_PS00988_diffs
+ track fiberSeqCompendium_PS00988_cpgDiff_l1
+ parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG03942 p < 0.01
longLabel HG03942 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS00988_diffs_l2
- parent fiberSeqMeth_PS00988_diffs
+ track fiberSeqCompendium_PS00988_cpgDiff_l2
+ parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG03942 p < 0.001
longLabel HG03942 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS00988_diffs_l3
- parent fiberSeqMeth_PS00988_diffs
+ track fiberSeqCompendium_PS00988_cpgDiff_l3
+ parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG03942 p < 0.0001
longLabel HG03942 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS00989_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00989_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00989/all.percent.accessible.bw
+ shortLabel HG04160 Acc
+ longLabel HG04160 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 291
+
+ track fiberSeqCompendium_PS00989_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00989/fire-peaks.ucsc.bb
+ shortLabel HG04160 Peaks
+ longLabel HG04160 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver HG04160 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 292
+
+ track fiberSeqCompendium_PS00989_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel HG04160 Hap1/2
+ longLabel HG04160 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 293
+
+ track fiberSeqCompendium_PS00989_hap_h1
+ parent fiberSeqCompendium_PS00989_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel HG04160 Hap1
+ longLabel HG04160 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS00989_hap_h2
+ parent fiberSeqCompendium_PS00989_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel HG04160 Hap2
+ longLabel HG04160 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS00989_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.combined.bw
shortLabel HG04160 CpG
longLabel HG04160 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 294
- track fiberSeqMeth_PS00989_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00989_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG04160 CpG Hap1/2
longLabel HG04160 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 295
- track fiberSeqMeth_PS00989_hap_h1
- parent fiberSeqMeth_PS00989_hap
+ track fiberSeqCompendium_PS00989_cpgHap_h1
+ parent fiberSeqCompendium_PS00989_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.hap1.bw
color 0,114,178
- shortLabel HG04160 CpG Hap1
+ shortLabel HG04160 Hap1
longLabel HG04160 CpG methylation, haplotype 1
- track fiberSeqMeth_PS00989_hap_h2
- parent fiberSeqMeth_PS00989_hap
+ track fiberSeqCompendium_PS00989_cpgHap_h2
+ parent fiberSeqCompendium_PS00989_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.hap2.bw
color 213,94,0
- shortLabel HG04160 CpG Hap2
+ shortLabel HG04160 Hap2
longLabel HG04160 CpG methylation, haplotype 2
- track fiberSeqMeth_PS00989_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00989_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel HG04160 CpG diffs
+ shortLabel HG04160 CpG diff
longLabel HG04160 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 296
- track fiberSeqMeth_PS00989_diffs_l0
- parent fiberSeqMeth_PS00989_diffs
+ track fiberSeqCompendium_PS00989_cpgDiff_l0
+ parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_all.bw
color 137,143,143
shortLabel HG04160 All
longLabel HG04160 CpG haplotype difference, All
- track fiberSeqMeth_PS00989_diffs_l1
- parent fiberSeqMeth_PS00989_diffs
+ track fiberSeqCompendium_PS00989_cpgDiff_l1
+ parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG04160 p < 0.01
longLabel HG04160 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS00989_diffs_l2
- parent fiberSeqMeth_PS00989_diffs
+ track fiberSeqCompendium_PS00989_cpgDiff_l2
+ parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG04160 p < 0.001
longLabel HG04160 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS00989_diffs_l3
- parent fiberSeqMeth_PS00989_diffs
+ track fiberSeqCompendium_PS00989_cpgDiff_l3
+ parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG04160 p < 0.0001
longLabel HG04160 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS00990_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00990_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/all.percent.accessible.bw
+ shortLabel HG04187 Acc
+ longLabel HG04187 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 301
+
+ track fiberSeqCompendium_PS00990_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/fire-peaks.ucsc.bb
+ shortLabel HG04187 Peaks
+ longLabel HG04187 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver HG04187 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 302
+
+ track fiberSeqCompendium_PS00990_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel HG04187 Hap1/2
+ longLabel HG04187 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 303
+
+ track fiberSeqCompendium_PS00990_hap_h1
+ parent fiberSeqCompendium_PS00990_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel HG04187 Hap1
+ longLabel HG04187 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS00990_hap_h2
+ parent fiberSeqCompendium_PS00990_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel HG04187 Hap2
+ longLabel HG04187 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS00990_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.combined.bw
shortLabel HG04187 CpG
longLabel HG04187 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 304
- track fiberSeqMeth_PS00990_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00990_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG04187 CpG Hap1/2
longLabel HG04187 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 305
- track fiberSeqMeth_PS00990_hap_h1
- parent fiberSeqMeth_PS00990_hap
+ track fiberSeqCompendium_PS00990_cpgHap_h1
+ parent fiberSeqCompendium_PS00990_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.hap1.bw
color 0,114,178
- shortLabel HG04187 CpG Hap1
+ shortLabel HG04187 Hap1
longLabel HG04187 CpG methylation, haplotype 1
- track fiberSeqMeth_PS00990_hap_h2
- parent fiberSeqMeth_PS00990_hap
+ track fiberSeqCompendium_PS00990_cpgHap_h2
+ parent fiberSeqCompendium_PS00990_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.hap2.bw
color 213,94,0
- shortLabel HG04187 CpG Hap2
+ shortLabel HG04187 Hap2
longLabel HG04187 CpG methylation, haplotype 2
- track fiberSeqMeth_PS00990_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS00990_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HG04187 CpG diff
+ longLabel HG04187 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 306
+
+ track fiberSeqCompendium_PS00990_cpgDiff_l0
+ parent fiberSeqCompendium_PS00990_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HG04187 All
+ longLabel HG04187 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS00990_cpgDiff_l1
+ parent fiberSeqCompendium_PS00990_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HG04187 p < 0.01
+ longLabel HG04187 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS00990_cpgDiff_l2
+ parent fiberSeqCompendium_PS00990_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HG04187 p < 0.001
+ longLabel HG04187 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS00990_cpgDiff_l3
+ parent fiberSeqCompendium_PS00990_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HG04187 p < 0.0001
+ longLabel HG04187 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS01302_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01302/all.percent.accessible.bw
+ shortLabel A549 Acc
+ longLabel A549 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 311
+
+ track fiberSeqCompendium_PS01302_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01302/fire-peaks.ucsc.bb
+ shortLabel A549 Peaks
+ longLabel A549 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver A549 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 312
+
+ track fiberSeqCompendium_PS01302_hap
+ parent fiberSeqCompendium off
container multiWig
- aggregate solidOverlay
+ aggregate transparentOverlay
showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
+ type bigWig 0 100
+ viewLimits 0:100
autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel HG04187 CpG diffs
- longLabel HG04187 CpG methylation difference between haplotypes, by significance threshold
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel A549 Hap1/2
+ longLabel A549 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 313
- track fiberSeqMeth_PS00990_diffs_l0
- parent fiberSeqMeth_PS00990_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_all.bw
- color 137,143,143
- shortLabel HG04187 All
- longLabel HG04187 CpG haplotype difference, All
-
- track fiberSeqMeth_PS00990_diffs_l1
- parent fiberSeqMeth_PS00990_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HG04187 p < 0.01
- longLabel HG04187 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS00990_diffs_l2
- parent fiberSeqMeth_PS00990_diffs
+ track fiberSeqCompendium_PS01302_hap_h1
+ parent fiberSeqCompendium_PS01302_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HG04187 p < 0.001
- longLabel HG04187 CpG haplotype difference, p < 0.001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel A549 Hap1
+ longLabel A549 Fiber-seq percent accessible, haplotype 1
- track fiberSeqMeth_PS00990_diffs_l3
- parent fiberSeqMeth_PS00990_diffs
+ track fiberSeqCompendium_PS01302_hap_h2
+ parent fiberSeqCompendium_PS01302_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HG04187 p < 0.0001
- longLabel HG04187 CpG haplotype difference, p < 0.0001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel A549 Hap2
+ longLabel A549 Fiber-seq percent accessible, haplotype 2
- track fiberSeqMeth_PS01302_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01302_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.combined.bw
shortLabel A549 CpG
longLabel A549 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 314
- track fiberSeqMeth_PS01302_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01302_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel A549 CpG Hap1/2
longLabel A549 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 315
- track fiberSeqMeth_PS01302_hap_h1
- parent fiberSeqMeth_PS01302_hap
+ track fiberSeqCompendium_PS01302_cpgHap_h1
+ parent fiberSeqCompendium_PS01302_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.hap1.bw
color 0,114,178
- shortLabel A549 CpG Hap1
+ shortLabel A549 Hap1
longLabel A549 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01302_hap_h2
- parent fiberSeqMeth_PS01302_hap
+ track fiberSeqCompendium_PS01302_cpgHap_h2
+ parent fiberSeqCompendium_PS01302_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.hap2.bw
color 213,94,0
- shortLabel A549 CpG Hap2
+ shortLabel A549 Hap2
longLabel A549 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01302_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01302_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel A549 CpG diffs
+ shortLabel A549 CpG diff
longLabel A549 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 316
- track fiberSeqMeth_PS01302_diffs_l0
- parent fiberSeqMeth_PS01302_diffs
+ track fiberSeqCompendium_PS01302_cpgDiff_l0
+ parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_all.bw
color 137,143,143
shortLabel A549 All
longLabel A549 CpG haplotype difference, All
- track fiberSeqMeth_PS01302_diffs_l1
- parent fiberSeqMeth_PS01302_diffs
+ track fiberSeqCompendium_PS01302_cpgDiff_l1
+ parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel A549 p < 0.01
longLabel A549 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01302_diffs_l2
- parent fiberSeqMeth_PS01302_diffs
+ track fiberSeqCompendium_PS01302_cpgDiff_l2
+ parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel A549 p < 0.001
longLabel A549 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01302_diffs_l3
- parent fiberSeqMeth_PS01302_diffs
+ track fiberSeqCompendium_PS01302_cpgDiff_l3
+ parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel A549 p < 0.0001
longLabel A549 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01305_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01305_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01305/all.percent.accessible.bw
+ shortLabel MCF-7 Acc
+ longLabel MCF-7 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 321
+
+ track fiberSeqCompendium_PS01305_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01305/fire-peaks.ucsc.bb
+ shortLabel MCF-7 Peaks
+ longLabel MCF-7 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver MCF-7 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 322
+
+ track fiberSeqCompendium_PS01305_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel MCF-7 Hap1/2
+ longLabel MCF-7 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 323
+
+ track fiberSeqCompendium_PS01305_hap_h1
+ parent fiberSeqCompendium_PS01305_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel MCF-7 Hap1
+ longLabel MCF-7 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01305_hap_h2
+ parent fiberSeqCompendium_PS01305_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel MCF-7 Hap2
+ longLabel MCF-7 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01305_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.combined.bw
shortLabel MCF-7 CpG
longLabel MCF-7 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 324
- track fiberSeqMeth_PS01305_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01305_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel MCF-7 CpG Hap1/2
longLabel MCF-7 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 325
- track fiberSeqMeth_PS01305_hap_h1
- parent fiberSeqMeth_PS01305_hap
+ track fiberSeqCompendium_PS01305_cpgHap_h1
+ parent fiberSeqCompendium_PS01305_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.hap1.bw
color 0,114,178
- shortLabel MCF-7 CpG Hap1
+ shortLabel MCF-7 Hap1
longLabel MCF-7 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01305_hap_h2
- parent fiberSeqMeth_PS01305_hap
+ track fiberSeqCompendium_PS01305_cpgHap_h2
+ parent fiberSeqCompendium_PS01305_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.hap2.bw
color 213,94,0
- shortLabel MCF-7 CpG Hap2
+ shortLabel MCF-7 Hap2
longLabel MCF-7 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01305_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01305_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel MCF-7 CpG diffs
+ shortLabel MCF-7 CpG diff
longLabel MCF-7 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 326
- track fiberSeqMeth_PS01305_diffs_l0
- parent fiberSeqMeth_PS01305_diffs
+ track fiberSeqCompendium_PS01305_cpgDiff_l0
+ parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_all.bw
color 137,143,143
shortLabel MCF-7 All
longLabel MCF-7 CpG haplotype difference, All
- track fiberSeqMeth_PS01305_diffs_l1
- parent fiberSeqMeth_PS01305_diffs
+ track fiberSeqCompendium_PS01305_cpgDiff_l1
+ parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel MCF-7 p < 0.01
longLabel MCF-7 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01305_diffs_l2
- parent fiberSeqMeth_PS01305_diffs
+ track fiberSeqCompendium_PS01305_cpgDiff_l2
+ parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel MCF-7 p < 0.001
longLabel MCF-7 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01305_diffs_l3
- parent fiberSeqMeth_PS01305_diffs
+ track fiberSeqCompendium_PS01305_cpgDiff_l3
+ parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel MCF-7 p < 0.0001
longLabel MCF-7 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01314_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01314_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/all.percent.accessible.bw
+ shortLabel HCT116 Acc
+ longLabel HCT116 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 331
+
+ track fiberSeqCompendium_PS01314_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/fire-peaks.ucsc.bb
+ shortLabel HCT116 Peaks
+ longLabel HCT116 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver HCT116 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 332
+
+ track fiberSeqCompendium_PS01314_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel HCT116 Hap1/2
+ longLabel HCT116 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 333
+
+ track fiberSeqCompendium_PS01314_hap_h1
+ parent fiberSeqCompendium_PS01314_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel HCT116 Hap1
+ longLabel HCT116 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01314_hap_h2
+ parent fiberSeqCompendium_PS01314_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel HCT116 Hap2
+ longLabel HCT116 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01314_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.combined.bw
shortLabel HCT116 CpG
longLabel HCT116 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 334
- track fiberSeqMeth_PS01314_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01314_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HCT116 CpG Hap1/2
longLabel HCT116 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 335
- track fiberSeqMeth_PS01314_hap_h1
- parent fiberSeqMeth_PS01314_hap
+ track fiberSeqCompendium_PS01314_cpgHap_h1
+ parent fiberSeqCompendium_PS01314_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.hap1.bw
color 0,114,178
- shortLabel HCT116 CpG Hap1
+ shortLabel HCT116 Hap1
longLabel HCT116 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01314_hap_h2
- parent fiberSeqMeth_PS01314_hap
+ track fiberSeqCompendium_PS01314_cpgHap_h2
+ parent fiberSeqCompendium_PS01314_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.hap2.bw
color 213,94,0
- shortLabel HCT116 CpG Hap2
+ shortLabel HCT116 Hap2
longLabel HCT116 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01314_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01314_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel HCT116 CpG diff
+ longLabel HCT116 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 336
+
+ track fiberSeqCompendium_PS01314_cpgDiff_l0
+ parent fiberSeqCompendium_PS01314_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel HCT116 All
+ longLabel HCT116 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS01314_cpgDiff_l1
+ parent fiberSeqCompendium_PS01314_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel HCT116 p < 0.01
+ longLabel HCT116 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS01314_cpgDiff_l2
+ parent fiberSeqCompendium_PS01314_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel HCT116 p < 0.001
+ longLabel HCT116 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS01314_cpgDiff_l3
+ parent fiberSeqCompendium_PS01314_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel HCT116 p < 0.0001
+ longLabel HCT116 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS01319_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01319/all.percent.accessible.bw
+ shortLabel Caco-2 Acc
+ longLabel Caco-2 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 341
+
+ track fiberSeqCompendium_PS01319_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01319/fire-peaks.ucsc.bb
+ shortLabel Caco-2 Peaks
+ longLabel Caco-2 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver Caco-2 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 342
+
+ track fiberSeqCompendium_PS01319_hap
+ parent fiberSeqCompendium off
container multiWig
- aggregate solidOverlay
+ aggregate transparentOverlay
showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
+ type bigWig 0 100
+ viewLimits 0:100
autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel HCT116 CpG diffs
- longLabel HCT116 CpG methylation difference between haplotypes, by significance threshold
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel Caco-2 Hap1/2
+ longLabel Caco-2 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 343
- track fiberSeqMeth_PS01314_diffs_l0
- parent fiberSeqMeth_PS01314_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_all.bw
- color 137,143,143
- shortLabel HCT116 All
- longLabel HCT116 CpG haplotype difference, All
-
- track fiberSeqMeth_PS01314_diffs_l1
- parent fiberSeqMeth_PS01314_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel HCT116 p < 0.01
- longLabel HCT116 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS01314_diffs_l2
- parent fiberSeqMeth_PS01314_diffs
+ track fiberSeqCompendium_PS01319_hap_h1
+ parent fiberSeqCompendium_PS01319_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel HCT116 p < 0.001
- longLabel HCT116 CpG haplotype difference, p < 0.001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel Caco-2 Hap1
+ longLabel Caco-2 Fiber-seq percent accessible, haplotype 1
- track fiberSeqMeth_PS01314_diffs_l3
- parent fiberSeqMeth_PS01314_diffs
+ track fiberSeqCompendium_PS01319_hap_h2
+ parent fiberSeqCompendium_PS01319_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel HCT116 p < 0.0001
- longLabel HCT116 CpG haplotype difference, p < 0.0001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel Caco-2 Hap2
+ longLabel Caco-2 Fiber-seq percent accessible, haplotype 2
- track fiberSeqMeth_PS01319_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01319_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.combined.bw
shortLabel Caco-2 CpG
longLabel Caco-2 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 344
- track fiberSeqMeth_PS01319_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01319_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Caco-2 CpG Hap1/2
longLabel Caco-2 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 345
- track fiberSeqMeth_PS01319_hap_h1
- parent fiberSeqMeth_PS01319_hap
+ track fiberSeqCompendium_PS01319_cpgHap_h1
+ parent fiberSeqCompendium_PS01319_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.hap1.bw
color 0,114,178
- shortLabel Caco-2 CpG Hap1
+ shortLabel Caco-2 Hap1
longLabel Caco-2 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01319_hap_h2
- parent fiberSeqMeth_PS01319_hap
+ track fiberSeqCompendium_PS01319_cpgHap_h2
+ parent fiberSeqCompendium_PS01319_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.hap2.bw
color 213,94,0
- shortLabel Caco-2 CpG Hap2
+ shortLabel Caco-2 Hap2
longLabel Caco-2 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01319_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01319_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel Caco-2 CpG diffs
+ shortLabel Caco-2 CpG diff
longLabel Caco-2 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 346
- track fiberSeqMeth_PS01319_diffs_l0
- parent fiberSeqMeth_PS01319_diffs
+ track fiberSeqCompendium_PS01319_cpgDiff_l0
+ parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_all.bw
color 137,143,143
shortLabel Caco-2 All
longLabel Caco-2 CpG haplotype difference, All
- track fiberSeqMeth_PS01319_diffs_l1
- parent fiberSeqMeth_PS01319_diffs
+ track fiberSeqCompendium_PS01319_cpgDiff_l1
+ parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Caco-2 p < 0.01
longLabel Caco-2 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01319_diffs_l2
- parent fiberSeqMeth_PS01319_diffs
+ track fiberSeqCompendium_PS01319_cpgDiff_l2
+ parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Caco-2 p < 0.001
longLabel Caco-2 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01319_diffs_l3
- parent fiberSeqMeth_PS01319_diffs
+ track fiberSeqCompendium_PS01319_cpgDiff_l3
+ parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Caco-2 p < 0.0001
longLabel Caco-2 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01388_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01388_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01388/all.percent.accessible.bw
+ shortLabel WTC-11 Acc
+ longLabel WTC-11 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 351
+
+ track fiberSeqCompendium_PS01388_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01388/fire-peaks.ucsc.bb
+ shortLabel WTC-11 Peaks
+ longLabel WTC-11 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver WTC-11 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 352
+
+ track fiberSeqCompendium_PS01388_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel WTC-11 Hap1/2
+ longLabel WTC-11 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 353
+
+ track fiberSeqCompendium_PS01388_hap_h1
+ parent fiberSeqCompendium_PS01388_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel WTC-11 Hap1
+ longLabel WTC-11 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01388_hap_h2
+ parent fiberSeqCompendium_PS01388_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel WTC-11 Hap2
+ longLabel WTC-11 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01388_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.combined.bw
shortLabel WTC-11 CpG
longLabel WTC-11 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 354
- track fiberSeqMeth_PS01388_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01388_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel WTC-11 CpG Hap1/2
longLabel WTC-11 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 355
- track fiberSeqMeth_PS01388_hap_h1
- parent fiberSeqMeth_PS01388_hap
+ track fiberSeqCompendium_PS01388_cpgHap_h1
+ parent fiberSeqCompendium_PS01388_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.hap1.bw
color 0,114,178
- shortLabel WTC-11 CpG Hap1
+ shortLabel WTC-11 Hap1
longLabel WTC-11 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01388_hap_h2
- parent fiberSeqMeth_PS01388_hap
+ track fiberSeqCompendium_PS01388_cpgHap_h2
+ parent fiberSeqCompendium_PS01388_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.hap2.bw
color 213,94,0
- shortLabel WTC-11 CpG Hap2
+ shortLabel WTC-11 Hap2
longLabel WTC-11 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01388_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01388_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel WTC-11 CpG diffs
+ shortLabel WTC-11 CpG diff
longLabel WTC-11 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 356
- track fiberSeqMeth_PS01388_diffs_l0
- parent fiberSeqMeth_PS01388_diffs
+ track fiberSeqCompendium_PS01388_cpgDiff_l0
+ parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_all.bw
color 137,143,143
shortLabel WTC-11 All
longLabel WTC-11 CpG haplotype difference, All
- track fiberSeqMeth_PS01388_diffs_l1
- parent fiberSeqMeth_PS01388_diffs
+ track fiberSeqCompendium_PS01388_cpgDiff_l1
+ parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel WTC-11 p < 0.01
longLabel WTC-11 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01388_diffs_l2
- parent fiberSeqMeth_PS01388_diffs
+ track fiberSeqCompendium_PS01388_cpgDiff_l2
+ parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel WTC-11 p < 0.001
longLabel WTC-11 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01388_diffs_l3
- parent fiberSeqMeth_PS01388_diffs
+ track fiberSeqCompendium_PS01388_cpgDiff_l3
+ parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel WTC-11 p < 0.0001
longLabel WTC-11 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01517_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01517_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/all.percent.accessible.bw
+ shortLabel GM28572 Acc
+ longLabel GM28572 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 361
+
+ track fiberSeqCompendium_PS01517_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/fire-peaks.ucsc.bb
+ shortLabel GM28572 Peaks
+ longLabel GM28572 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver GM28572 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 362
+
+ track fiberSeqCompendium_PS01517_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel GM28572 Hap1/2
+ longLabel GM28572 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 363
+
+ track fiberSeqCompendium_PS01517_hap_h1
+ parent fiberSeqCompendium_PS01517_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel GM28572 Hap1
+ longLabel GM28572 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01517_hap_h2
+ parent fiberSeqCompendium_PS01517_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel GM28572 Hap2
+ longLabel GM28572 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01517_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.combined.bw
shortLabel GM28572 CpG
longLabel GM28572 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 364
- track fiberSeqMeth_PS01517_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01517_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM28572 CpG Hap1/2
longLabel GM28572 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 365
- track fiberSeqMeth_PS01517_hap_h1
- parent fiberSeqMeth_PS01517_hap
+ track fiberSeqCompendium_PS01517_cpgHap_h1
+ parent fiberSeqCompendium_PS01517_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.hap1.bw
color 0,114,178
- shortLabel GM28572 CpG Hap1
+ shortLabel GM28572 Hap1
longLabel GM28572 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01517_hap_h2
- parent fiberSeqMeth_PS01517_hap
+ track fiberSeqCompendium_PS01517_cpgHap_h2
+ parent fiberSeqCompendium_PS01517_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.hap2.bw
color 213,94,0
- shortLabel GM28572 CpG Hap2
+ shortLabel GM28572 Hap2
longLabel GM28572 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01517_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01517_cpgDiff
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate solidOverlay
+ showSubtrackColorOnUi on
+ type bigWig -100 100
+ viewLimits -100:100
+ autoScale off
+ windowingFunction mean
+ maxHeightPixels 100:50:8
+ shortLabel GM28572 CpG diff
+ longLabel GM28572 CpG methylation difference between haplotypes, by significance threshold
+ onlyVisibility full
+ priority 366
+
+ track fiberSeqCompendium_PS01517_cpgDiff_l0
+ parent fiberSeqCompendium_PS01517_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_all.bw
+ color 137,143,143
+ shortLabel GM28572 All
+ longLabel GM28572 CpG haplotype difference, All
+
+ track fiberSeqCompendium_PS01517_cpgDiff_l1
+ parent fiberSeqCompendium_PS01517_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.01.bw
+ color 235,229,52
+ shortLabel GM28572 p < 0.01
+ longLabel GM28572 CpG haplotype difference, p < 0.01
+
+ track fiberSeqCompendium_PS01517_cpgDiff_l2
+ parent fiberSeqCompendium_PS01517_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.001.bw
+ color 245,148,22
+ shortLabel GM28572 p < 0.001
+ longLabel GM28572 CpG haplotype difference, p < 0.001
+
+ track fiberSeqCompendium_PS01517_cpgDiff_l3
+ parent fiberSeqCompendium_PS01517_cpgDiff
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.0001.bw
+ color 255,0,0
+ shortLabel GM28572 p < 0.0001
+ longLabel GM28572 CpG haplotype difference, p < 0.0001
+
+ track fiberSeqCompendium_PS01518_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01518/all.percent.accessible.bw
+ shortLabel GM28570 Acc
+ longLabel GM28570 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 371
+
+ track fiberSeqCompendium_PS01518_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01518/fire-peaks.ucsc.bb
+ shortLabel GM28570 Peaks
+ longLabel GM28570 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver GM28570 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 372
+
+ track fiberSeqCompendium_PS01518_hap
+ parent fiberSeqCompendium off
container multiWig
- aggregate solidOverlay
+ aggregate transparentOverlay
showSubtrackColorOnUi on
- type bigWig -100 100
- viewLimits -100:100
+ type bigWig 0 100
+ viewLimits 0:100
autoScale off
- windowingFunction mean
- maxHeightPixels 100:50:8
- shortLabel GM28572 CpG diffs
- longLabel GM28572 CpG methylation difference between haplotypes, by significance threshold
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel GM28570 Hap1/2
+ longLabel GM28570 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 373
- track fiberSeqMeth_PS01517_diffs_l0
- parent fiberSeqMeth_PS01517_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_all.bw
- color 137,143,143
- shortLabel GM28572 All
- longLabel GM28572 CpG haplotype difference, All
-
- track fiberSeqMeth_PS01517_diffs_l1
- parent fiberSeqMeth_PS01517_diffs
- type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.01.bw
- color 235,229,52
- shortLabel GM28572 p < 0.01
- longLabel GM28572 CpG haplotype difference, p < 0.01
-
- track fiberSeqMeth_PS01517_diffs_l2
- parent fiberSeqMeth_PS01517_diffs
+ track fiberSeqCompendium_PS01518_hap_h1
+ parent fiberSeqCompendium_PS01518_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.001.bw
- color 245,148,22
- shortLabel GM28572 p < 0.001
- longLabel GM28572 CpG haplotype difference, p < 0.001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel GM28570 Hap1
+ longLabel GM28570 Fiber-seq percent accessible, haplotype 1
- track fiberSeqMeth_PS01517_diffs_l3
- parent fiberSeqMeth_PS01517_diffs
+ track fiberSeqCompendium_PS01518_hap_h2
+ parent fiberSeqCompendium_PS01518_hap
type bigWig
- bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.0001.bw
- color 255,0,0
- shortLabel GM28572 p < 0.0001
- longLabel GM28572 CpG haplotype difference, p < 0.0001
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel GM28570 Hap2
+ longLabel GM28570 Fiber-seq percent accessible, haplotype 2
- track fiberSeqMeth_PS01518_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01518_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.combined.bw
shortLabel GM28570 CpG
longLabel GM28570 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 374
- track fiberSeqMeth_PS01518_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01518_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM28570 CpG Hap1/2
longLabel GM28570 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 375
- track fiberSeqMeth_PS01518_hap_h1
- parent fiberSeqMeth_PS01518_hap
+ track fiberSeqCompendium_PS01518_cpgHap_h1
+ parent fiberSeqCompendium_PS01518_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.hap1.bw
color 0,114,178
- shortLabel GM28570 CpG Hap1
+ shortLabel GM28570 Hap1
longLabel GM28570 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01518_hap_h2
- parent fiberSeqMeth_PS01518_hap
+ track fiberSeqCompendium_PS01518_cpgHap_h2
+ parent fiberSeqCompendium_PS01518_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.hap2.bw
color 213,94,0
- shortLabel GM28570 CpG Hap2
+ shortLabel GM28570 Hap2
longLabel GM28570 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01518_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01518_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel GM28570 CpG diffs
+ shortLabel GM28570 CpG diff
longLabel GM28570 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 376
- track fiberSeqMeth_PS01518_diffs_l0
- parent fiberSeqMeth_PS01518_diffs
+ track fiberSeqCompendium_PS01518_cpgDiff_l0
+ parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_all.bw
color 137,143,143
shortLabel GM28570 All
longLabel GM28570 CpG haplotype difference, All
- track fiberSeqMeth_PS01518_diffs_l1
- parent fiberSeqMeth_PS01518_diffs
+ track fiberSeqCompendium_PS01518_cpgDiff_l1
+ parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM28570 p < 0.01
longLabel GM28570 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01518_diffs_l2
- parent fiberSeqMeth_PS01518_diffs
+ track fiberSeqCompendium_PS01518_cpgDiff_l2
+ parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM28570 p < 0.001
longLabel GM28570 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01518_diffs_l3
- parent fiberSeqMeth_PS01518_diffs
+ track fiberSeqCompendium_PS01518_cpgDiff_l3
+ parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM28570 p < 0.0001
longLabel GM28570 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01519_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01519_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01519/all.percent.accessible.bw
+ shortLabel GM25456 Acc
+ longLabel GM25456 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 381
+
+ track fiberSeqCompendium_PS01519_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01519/fire-peaks.ucsc.bb
+ shortLabel GM25456 Peaks
+ longLabel GM25456 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver GM25456 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 382
+
+ track fiberSeqCompendium_PS01519_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel GM25456 Hap1/2
+ longLabel GM25456 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 383
+
+ track fiberSeqCompendium_PS01519_hap_h1
+ parent fiberSeqCompendium_PS01519_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel GM25456 Hap1
+ longLabel GM25456 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01519_hap_h2
+ parent fiberSeqCompendium_PS01519_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel GM25456 Hap2
+ longLabel GM25456 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01519_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.combined.bw
shortLabel GM25456 CpG
longLabel GM25456 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 384
- track fiberSeqMeth_PS01519_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01519_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM25456 CpG Hap1/2
longLabel GM25456 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 385
- track fiberSeqMeth_PS01519_hap_h1
- parent fiberSeqMeth_PS01519_hap
+ track fiberSeqCompendium_PS01519_cpgHap_h1
+ parent fiberSeqCompendium_PS01519_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.hap1.bw
color 0,114,178
- shortLabel GM25456 CpG Hap1
+ shortLabel GM25456 Hap1
longLabel GM25456 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01519_hap_h2
- parent fiberSeqMeth_PS01519_hap
+ track fiberSeqCompendium_PS01519_cpgHap_h2
+ parent fiberSeqCompendium_PS01519_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.hap2.bw
color 213,94,0
- shortLabel GM25456 CpG Hap2
+ shortLabel GM25456 Hap2
longLabel GM25456 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01519_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01519_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel GM25456 CpG diffs
+ shortLabel GM25456 CpG diff
longLabel GM25456 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 386
- track fiberSeqMeth_PS01519_diffs_l0
- parent fiberSeqMeth_PS01519_diffs
+ track fiberSeqCompendium_PS01519_cpgDiff_l0
+ parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_all.bw
color 137,143,143
shortLabel GM25456 All
longLabel GM25456 CpG haplotype difference, All
- track fiberSeqMeth_PS01519_diffs_l1
- parent fiberSeqMeth_PS01519_diffs
+ track fiberSeqCompendium_PS01519_cpgDiff_l1
+ parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM25456 p < 0.01
longLabel GM25456 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01519_diffs_l2
- parent fiberSeqMeth_PS01519_diffs
+ track fiberSeqCompendium_PS01519_cpgDiff_l2
+ parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM25456 p < 0.001
longLabel GM25456 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01519_diffs_l3
- parent fiberSeqMeth_PS01519_diffs
+ track fiberSeqCompendium_PS01519_cpgDiff_l3
+ parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM25456 p < 0.0001
longLabel GM25456 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01520_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01520_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01520/all.percent.accessible.bw
+ shortLabel GM25455 Acc
+ longLabel GM25455 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 391
+
+ track fiberSeqCompendium_PS01520_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01520/fire-peaks.ucsc.bb
+ shortLabel GM25455 Peaks
+ longLabel GM25455 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver GM25455 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 392
+
+ track fiberSeqCompendium_PS01520_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel GM25455 Hap1/2
+ longLabel GM25455 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 393
+
+ track fiberSeqCompendium_PS01520_hap_h1
+ parent fiberSeqCompendium_PS01520_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel GM25455 Hap1
+ longLabel GM25455 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01520_hap_h2
+ parent fiberSeqCompendium_PS01520_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel GM25455 Hap2
+ longLabel GM25455 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01520_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.combined.bw
shortLabel GM25455 CpG
longLabel GM25455 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 394
- track fiberSeqMeth_PS01520_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01520_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM25455 CpG Hap1/2
longLabel GM25455 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 395
- track fiberSeqMeth_PS01520_hap_h1
- parent fiberSeqMeth_PS01520_hap
+ track fiberSeqCompendium_PS01520_cpgHap_h1
+ parent fiberSeqCompendium_PS01520_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.hap1.bw
color 0,114,178
- shortLabel GM25455 CpG Hap1
+ shortLabel GM25455 Hap1
longLabel GM25455 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01520_hap_h2
- parent fiberSeqMeth_PS01520_hap
+ track fiberSeqCompendium_PS01520_cpgHap_h2
+ parent fiberSeqCompendium_PS01520_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.hap2.bw
color 213,94,0
- shortLabel GM25455 CpG Hap2
+ shortLabel GM25455 Hap2
longLabel GM25455 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01520_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01520_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel GM25455 CpG diffs
+ shortLabel GM25455 CpG diff
longLabel GM25455 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 396
- track fiberSeqMeth_PS01520_diffs_l0
- parent fiberSeqMeth_PS01520_diffs
+ track fiberSeqCompendium_PS01520_cpgDiff_l0
+ parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_all.bw
color 137,143,143
shortLabel GM25455 All
longLabel GM25455 CpG haplotype difference, All
- track fiberSeqMeth_PS01520_diffs_l1
- parent fiberSeqMeth_PS01520_diffs
+ track fiberSeqCompendium_PS01520_cpgDiff_l1
+ parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM25455 p < 0.01
longLabel GM25455 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01520_diffs_l2
- parent fiberSeqMeth_PS01520_diffs
+ track fiberSeqCompendium_PS01520_cpgDiff_l2
+ parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM25455 p < 0.001
longLabel GM25455 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01520_diffs_l3
- parent fiberSeqMeth_PS01520_diffs
+ track fiberSeqCompendium_PS01520_cpgDiff_l3
+ parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM25455 p < 0.0001
longLabel GM25455 CpG haplotype difference, p < 0.0001
- track fiberSeqMeth_PS01524_comb
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01524_acc
+ parent fiberSeqCompendium off
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01524/all.percent.accessible.bw
+ shortLabel GM27730 Acc
+ longLabel GM27730 Fiber-seq percent accessible, both haplotypes
+ color 0,0,0
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ graphTypeDefault bar
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ onlyVisibility full
+ priority 401
+
+ track fiberSeqCompendium_PS01524_peaks
+ parent fiberSeqCompendium off
+ type bigNarrowPeak
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01524/fire-peaks.ucsc.bb
+ shortLabel GM27730 Peaks
+ longLabel GM27730 Fiber-seq FIRE peaks
+ signalFilter 0
+ signalFilterLimits 0:100
+ qValueFilter 0
+ qValueFilterLimits 0:100
+ scoreFilter 0
+ scoreFilterLimits 0:1000
+ mouseOver GM27730 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
+ onlyVisibility dense
+ priority 402
+
+ track fiberSeqCompendium_PS01524_hap
+ parent fiberSeqCompendium off
+ container multiWig
+ aggregate transparentOverlay
+ showSubtrackColorOnUi on
+ type bigWig 0 100
+ viewLimits 0:100
+ autoScale off
+ alwaysZero on
+ windowingFunction maximum
+ maxHeightPixels 100:40:8
+ shortLabel GM27730 Hap1/2
+ longLabel GM27730 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
+ onlyVisibility full
+ priority 403
+
+ track fiberSeqCompendium_PS01524_hap_h1
+ parent fiberSeqCompendium_PS01524_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap1.percent.accessible.bw
+ color 0,114,178
+ shortLabel GM27730 Hap1
+ longLabel GM27730 Fiber-seq percent accessible, haplotype 1
+
+ track fiberSeqCompendium_PS01524_hap_h2
+ parent fiberSeqCompendium_PS01524_hap
+ type bigWig
+ bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap2.percent.accessible.bw
+ color 213,94,0
+ shortLabel GM27730 Hap2
+ longLabel GM27730 Fiber-seq percent accessible, haplotype 2
+
+ track fiberSeqCompendium_PS01524_cpg
+ parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.combined.bw
shortLabel GM27730 CpG
longLabel GM27730 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
+ priority 404
- track fiberSeqMeth_PS01524_hap
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01524_cpgHap
+ parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
+ alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM27730 CpG Hap1/2
longLabel GM27730 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
+ priority 405
- track fiberSeqMeth_PS01524_hap_h1
- parent fiberSeqMeth_PS01524_hap
+ track fiberSeqCompendium_PS01524_cpgHap_h1
+ parent fiberSeqCompendium_PS01524_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.hap1.bw
color 0,114,178
- shortLabel GM27730 CpG Hap1
+ shortLabel GM27730 Hap1
longLabel GM27730 CpG methylation, haplotype 1
- track fiberSeqMeth_PS01524_hap_h2
- parent fiberSeqMeth_PS01524_hap
+ track fiberSeqCompendium_PS01524_cpgHap_h2
+ parent fiberSeqCompendium_PS01524_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.hap2.bw
color 213,94,0
- shortLabel GM27730 CpG Hap2
+ shortLabel GM27730 Hap2
longLabel GM27730 CpG methylation, haplotype 2
- track fiberSeqMeth_PS01524_diffs
- parent fiberSeqMeth off
+ track fiberSeqCompendium_PS01524_cpgDiff
+ parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
- shortLabel GM27730 CpG diffs
+ shortLabel GM27730 CpG diff
longLabel GM27730 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
+ priority 406
- track fiberSeqMeth_PS01524_diffs_l0
- parent fiberSeqMeth_PS01524_diffs
+ track fiberSeqCompendium_PS01524_cpgDiff_l0
+ parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_all.bw
color 137,143,143
shortLabel GM27730 All
longLabel GM27730 CpG haplotype difference, All
- track fiberSeqMeth_PS01524_diffs_l1
- parent fiberSeqMeth_PS01524_diffs
+ track fiberSeqCompendium_PS01524_cpgDiff_l1
+ parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM27730 p < 0.01
longLabel GM27730 CpG haplotype difference, p < 0.01
- track fiberSeqMeth_PS01524_diffs_l2
- parent fiberSeqMeth_PS01524_diffs
+ track fiberSeqCompendium_PS01524_cpgDiff_l2
+ parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM27730 p < 0.001
longLabel GM27730 CpG haplotype difference, p < 0.001
- track fiberSeqMeth_PS01524_diffs_l3
- parent fiberSeqMeth_PS01524_diffs
+ track fiberSeqCompendium_PS01524_cpgDiff_l3
+ parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM27730 p < 0.0001
longLabel GM27730 CpG haplotype difference, p < 0.0001