444b1eb7e7ec2938a4a9a6d3ed214179073ab6f7
max
Wed Sep 9 05:41:23 2026 -0700
Faceted composite: manual row reordering, group-by, saved UI state, and per-facet "only" links
The Fiber-seq compendium put 41 samples times six data types into one
faceted composite, which pushed on the parts of the page that were built
for a flat list of tracks. Changes here, all in the shared faceted
composite code rather than anything Fiber-seq specific:
Row order. Track order in the image follows the table, so the table now
lets you set that order by hand. Vendored DataTables RowReorder 1.5.1
adds a drag handle as the first column after the checkbox, enabled on
the "shown in the browser" tab where reordering means something. The
dragged order is remembered by sample name rather than by row number, so
it survives a metadata file whose contents have changed.
Group by. A container of six data types can be read two ways, so the
page offers both: group the image by sample, keeping a sample's six
tracks together, or by data type, putting all the accessibility tracks
next to each other. cartDump assigns the priorities and just swaps the
nesting of its two loops. trackDb sets the starting choice with
defaultGroupBy.
Saved state. Facets, per-column searches, sort column, page length,
which tab was open and the hand-dragged order go to localStorage keyed
by metadata id, so coming back to the page does not mean setting it all
up again.
Facet "only" links. A small "only" appears on hover behind each facet
value and narrows to just that one, instead of unticking the others by
hand.
Column descriptions. A metadata column heading can now carry a longer
explanation after a "|", shown behind an info icon on both the column
header and the facet heading.
Also: parseDataTypes() was returning its list reversed, since slPairAdd
prepends and nothing put it back, so the data type checkboxes and the
resulting subtrack order were backwards; the composite lifts itself out
of hide when the user touches anything on the page, which is what they
meant by touching it; the facet sidebar collapses when a table has no
facetable columns; and the label wording throughout says "samples" and
"in the browser" rather than "tracks" and "active".
The Methbase hg38 track gets labels for its three data types, which were
showing as the bare pipeline names hmr, levels and reads.
refs #36210
diff --git src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
index 0aa9270121e..3d475a70646 100644
--- src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
+++ src/hg/makeDb/trackDb/human/hg38/fiberSeq.ra
@@ -1,6538 +1,6539 @@
# Fiber-seq: chromatin accessibility, FIRE regulatory elements and CpG
# methylation from PacBio HiFi Fiber-seq, Stergachis and Vollger labs.
# Generated by hg/makeDb/scripts/fiberSeq/fiberSeqTrackDb.py.
# Do not edit by hand, edit the script and regenerate.
track fiberSeq
superTrack on show
shortLabel Fiber-seq
longLabel Fiber-seq chromatin accessibility, regulatory elements and CpG methylation
group regulation
priority 2.5
track fiberSeqAcc
parent fiberSeq
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:50:8
visibility full
priority 1
shortLabel Fiber-seq Acc
longLabel Fiber-seq percent-accessible chromatin in seven common cell lines
track fiberSeqAcc_PM00001
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/all.percent.accessible.bw
color 230,159,0
shortLabel GM12878
longLabel GM12878 Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00004
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/all.percent.accessible.bw
color 86,180,233
shortLabel K562
longLabel K562 Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00005
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/all.percent.accessible.bw
color 0,158,115
shortLabel HepG2
longLabel HepG2 Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00010
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/all.percent.accessible.bw
color 240,228,66
shortLabel H1
longLabel H1 Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00008
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/all.percent.accessible.bw
color 0,114,178
shortLabel Hap1
longLabel Hap1 Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00012
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/all.percent.accessible.bw
color 213,94,0
shortLabel Hek293T
longLabel Hek293T Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqAcc_PM00009
parent fiberSeqAcc
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/all.percent.accessible.bw
color 204,121,167
shortLabel Jurkat
longLabel Jurkat Fiber-seq percent-accessible chromatin, both haplotypes
track fiberSeqCompendium
parent fiberSeq
compositeTrack faceted
type bigWig
shortLabel Fiber-seq Compendium
longLabel Fiber-seq accessibility, FIRE peaks and CpG methylation in 41 samples
metaDataUrl /gbdb/hg38/fiberSeq/fiberSeqCompendium_metadata.tsv
colorSettingsUrl /gbdb/hg38/fiberSeq/fiberSeqCompendium_colors.json
primaryKey Accession
dataTypes acc|"Percent accessible" peaks|"FIRE peaks" hap|"Haplotype accessibility" cpg|"CpG methylation" cpgHap|"Haplotype CpG" cpgDiff|"CpG haplotype difference"
defaultSortField Accession
+ defaultGroupBy sample
maxCheckboxes 50
noInherit on
visibility hide
priority 2
track fiberSeqCompendium_PM00001_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/all.percent.accessible.bw
shortLabel GM12878 Acc
longLabel GM12878 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 1
track fiberSeqCompendium_PM00001_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/fire-peaks.ucsc.bb
shortLabel GM12878 Peaks
longLabel GM12878 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM12878 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 2
track fiberSeqCompendium_PM00001_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM12878 Hap1/2
longLabel GM12878 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 3
track fiberSeqCompendium_PM00001_hap_h1
parent fiberSeqCompendium_PM00001_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM12878 Hap1
longLabel GM12878 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00001_hap_h2
parent fiberSeqCompendium_PM00001_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM12878 Hap2
longLabel GM12878 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00001_cpg
parent fiberSeqCompendium on
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.combined.bw
shortLabel GM12878 CpG
longLabel GM12878 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 4
track fiberSeqCompendium_PM00001_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM12878 CpG Hap1/2
longLabel GM12878 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 5
track fiberSeqCompendium_PM00001_cpgHap_h1
parent fiberSeqCompendium_PM00001_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap1.bw
color 0,114,178
shortLabel GM12878 Hap1
longLabel GM12878 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00001_cpgHap_h2
parent fiberSeqCompendium_PM00001_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.hap2.bw
color 213,94,0
shortLabel GM12878 Hap2
longLabel GM12878 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00001_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM12878 CpG diff
longLabel GM12878 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 6
track fiberSeqCompendium_PM00001_cpgDiff_l0
parent fiberSeqCompendium_PM00001_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_all.bw
color 137,143,143
shortLabel GM12878 All
longLabel GM12878 CpG haplotype difference, All
track fiberSeqCompendium_PM00001_cpgDiff_l1
parent fiberSeqCompendium_PM00001_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM12878 p < 0.01
longLabel GM12878 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00001_cpgDiff_l2
parent fiberSeqCompendium_PM00001_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM12878 p < 0.001
longLabel GM12878 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00001_cpgDiff_l3
parent fiberSeqCompendium_PM00001_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00001/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM12878 p < 0.0001
longLabel GM12878 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00002_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/all.percent.accessible.bw
shortLabel HG002 Acc
longLabel HG002 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 11
track fiberSeqCompendium_PM00002_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/fire-peaks.ucsc.bb
shortLabel HG002 Peaks
longLabel HG002 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG002 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 12
track fiberSeqCompendium_PM00002_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG002 Hap1/2
longLabel HG002 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 13
track fiberSeqCompendium_PM00002_hap_h1
parent fiberSeqCompendium_PM00002_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG002 Hap1
longLabel HG002 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00002_hap_h2
parent fiberSeqCompendium_PM00002_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG002 Hap2
longLabel HG002 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00002_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.combined.bw
shortLabel HG002 CpG
longLabel HG002 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 14
track fiberSeqCompendium_PM00002_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG002 CpG Hap1/2
longLabel HG002 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 15
track fiberSeqCompendium_PM00002_cpgHap_h1
parent fiberSeqCompendium_PM00002_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap1.bw
color 0,114,178
shortLabel HG002 Hap1
longLabel HG002 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00002_cpgHap_h2
parent fiberSeqCompendium_PM00002_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.hap2.bw
color 213,94,0
shortLabel HG002 Hap2
longLabel HG002 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00002_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG002 CpG diff
longLabel HG002 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 16
track fiberSeqCompendium_PM00002_cpgDiff_l0
parent fiberSeqCompendium_PM00002_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_all.bw
color 137,143,143
shortLabel HG002 All
longLabel HG002 CpG haplotype difference, All
track fiberSeqCompendium_PM00002_cpgDiff_l1
parent fiberSeqCompendium_PM00002_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG002 p < 0.01
longLabel HG002 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00002_cpgDiff_l2
parent fiberSeqCompendium_PM00002_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG002 p < 0.001
longLabel HG002 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00002_cpgDiff_l3
parent fiberSeqCompendium_PM00002_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00002/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG002 p < 0.0001
longLabel HG002 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00004_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/all.percent.accessible.bw
shortLabel K562 Acc
longLabel K562 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 21
track fiberSeqCompendium_PM00004_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/fire-peaks.ucsc.bb
shortLabel K562 Peaks
longLabel K562 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver K562 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 22
track fiberSeqCompendium_PM00004_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel K562 Hap1/2
longLabel K562 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 23
track fiberSeqCompendium_PM00004_hap_h1
parent fiberSeqCompendium_PM00004_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/hap1.percent.accessible.bw
color 0,114,178
shortLabel K562 Hap1
longLabel K562 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00004_hap_h2
parent fiberSeqCompendium_PM00004_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/hap2.percent.accessible.bw
color 213,94,0
shortLabel K562 Hap2
longLabel K562 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00004_cpg
parent fiberSeqCompendium on
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.combined.bw
shortLabel K562 CpG
longLabel K562 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 24
track fiberSeqCompendium_PM00004_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel K562 CpG Hap1/2
longLabel K562 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 25
track fiberSeqCompendium_PM00004_cpgHap_h1
parent fiberSeqCompendium_PM00004_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap1.bw
color 0,114,178
shortLabel K562 Hap1
longLabel K562 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00004_cpgHap_h2
parent fiberSeqCompendium_PM00004_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.hap2.bw
color 213,94,0
shortLabel K562 Hap2
longLabel K562 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00004_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel K562 CpG diff
longLabel K562 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 26
track fiberSeqCompendium_PM00004_cpgDiff_l0
parent fiberSeqCompendium_PM00004_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_all.bw
color 137,143,143
shortLabel K562 All
longLabel K562 CpG haplotype difference, All
track fiberSeqCompendium_PM00004_cpgDiff_l1
parent fiberSeqCompendium_PM00004_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel K562 p < 0.01
longLabel K562 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00004_cpgDiff_l2
parent fiberSeqCompendium_PM00004_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel K562 p < 0.001
longLabel K562 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00004_cpgDiff_l3
parent fiberSeqCompendium_PM00004_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00004/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel K562 p < 0.0001
longLabel K562 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00005_acc
parent fiberSeqCompendium on
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/all.percent.accessible.bw
shortLabel HepG2 Acc
longLabel HepG2 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 31
track fiberSeqCompendium_PM00005_peaks
parent fiberSeqCompendium on
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/fire-peaks.ucsc.bb
shortLabel HepG2 Peaks
longLabel HepG2 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HepG2 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 32
track fiberSeqCompendium_PM00005_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HepG2 Hap1/2
longLabel HepG2 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 33
track fiberSeqCompendium_PM00005_hap_h1
parent fiberSeqCompendium_PM00005_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/hap1.percent.accessible.bw
color 0,114,178
shortLabel HepG2 Hap1
longLabel HepG2 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00005_hap_h2
parent fiberSeqCompendium_PM00005_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/hap2.percent.accessible.bw
color 213,94,0
shortLabel HepG2 Hap2
longLabel HepG2 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00005_cpg
parent fiberSeqCompendium on
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.combined.bw
shortLabel HepG2 CpG
longLabel HepG2 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 34
track fiberSeqCompendium_PM00005_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HepG2 CpG Hap1/2
longLabel HepG2 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 35
track fiberSeqCompendium_PM00005_cpgHap_h1
parent fiberSeqCompendium_PM00005_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap1.bw
color 0,114,178
shortLabel HepG2 Hap1
longLabel HepG2 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00005_cpgHap_h2
parent fiberSeqCompendium_PM00005_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.hap2.bw
color 213,94,0
shortLabel HepG2 Hap2
longLabel HepG2 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00005_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HepG2 CpG diff
longLabel HepG2 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 36
track fiberSeqCompendium_PM00005_cpgDiff_l0
parent fiberSeqCompendium_PM00005_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_all.bw
color 137,143,143
shortLabel HepG2 All
longLabel HepG2 CpG haplotype difference, All
track fiberSeqCompendium_PM00005_cpgDiff_l1
parent fiberSeqCompendium_PM00005_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HepG2 p < 0.01
longLabel HepG2 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00005_cpgDiff_l2
parent fiberSeqCompendium_PM00005_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HepG2 p < 0.001
longLabel HepG2 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00005_cpgDiff_l3
parent fiberSeqCompendium_PM00005_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00005/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HepG2 p < 0.0001
longLabel HepG2 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00006_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/all.percent.accessible.bw
shortLabel Panc1 Acc
longLabel Panc1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 41
track fiberSeqCompendium_PM00006_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/fire-peaks.ucsc.bb
shortLabel Panc1 Peaks
longLabel Panc1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Panc1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 42
track fiberSeqCompendium_PM00006_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Panc1 Hap1/2
longLabel Panc1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 43
track fiberSeqCompendium_PM00006_hap_h1
parent fiberSeqCompendium_PM00006_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/hap1.percent.accessible.bw
color 0,114,178
shortLabel Panc1 Hap1
longLabel Panc1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00006_hap_h2
parent fiberSeqCompendium_PM00006_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/hap2.percent.accessible.bw
color 213,94,0
shortLabel Panc1 Hap2
longLabel Panc1 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00006_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.combined.bw
shortLabel Panc1 CpG
longLabel Panc1 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 44
track fiberSeqCompendium_PM00006_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Panc1 CpG Hap1/2
longLabel Panc1 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 45
track fiberSeqCompendium_PM00006_cpgHap_h1
parent fiberSeqCompendium_PM00006_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.hap1.bw
color 0,114,178
shortLabel Panc1 Hap1
longLabel Panc1 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00006_cpgHap_h2
parent fiberSeqCompendium_PM00006_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.hap2.bw
color 213,94,0
shortLabel Panc1 Hap2
longLabel Panc1 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00006_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel Panc1 CpG diff
longLabel Panc1 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 46
track fiberSeqCompendium_PM00006_cpgDiff_l0
parent fiberSeqCompendium_PM00006_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_all.bw
color 137,143,143
shortLabel Panc1 All
longLabel Panc1 CpG haplotype difference, All
track fiberSeqCompendium_PM00006_cpgDiff_l1
parent fiberSeqCompendium_PM00006_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Panc1 p < 0.01
longLabel Panc1 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00006_cpgDiff_l2
parent fiberSeqCompendium_PM00006_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Panc1 p < 0.001
longLabel Panc1 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00006_cpgDiff_l3
parent fiberSeqCompendium_PM00006_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00006/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Panc1 p < 0.0001
longLabel Panc1 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00007_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/all.percent.accessible.bw
shortLabel THP-1 Acc
longLabel THP-1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 51
track fiberSeqCompendium_PM00007_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/fire-peaks.ucsc.bb
shortLabel THP-1 Peaks
longLabel THP-1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver THP-1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 52
track fiberSeqCompendium_PM00007_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel THP-1 Hap1/2
longLabel THP-1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 53
track fiberSeqCompendium_PM00007_hap_h1
parent fiberSeqCompendium_PM00007_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/hap1.percent.accessible.bw
color 0,114,178
shortLabel THP-1 Hap1
longLabel THP-1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00007_hap_h2
parent fiberSeqCompendium_PM00007_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/hap2.percent.accessible.bw
color 213,94,0
shortLabel THP-1 Hap2
longLabel THP-1 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00007_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.combined.bw
shortLabel THP-1 CpG
longLabel THP-1 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 54
track fiberSeqCompendium_PM00007_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel THP-1 CpG Hap1/2
longLabel THP-1 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 55
track fiberSeqCompendium_PM00007_cpgHap_h1
parent fiberSeqCompendium_PM00007_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.hap1.bw
color 0,114,178
shortLabel THP-1 Hap1
longLabel THP-1 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00007_cpgHap_h2
parent fiberSeqCompendium_PM00007_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.hap2.bw
color 213,94,0
shortLabel THP-1 Hap2
longLabel THP-1 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00007_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel THP-1 CpG diff
longLabel THP-1 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 56
track fiberSeqCompendium_PM00007_cpgDiff_l0
parent fiberSeqCompendium_PM00007_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_all.bw
color 137,143,143
shortLabel THP-1 All
longLabel THP-1 CpG haplotype difference, All
track fiberSeqCompendium_PM00007_cpgDiff_l1
parent fiberSeqCompendium_PM00007_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel THP-1 p < 0.01
longLabel THP-1 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00007_cpgDiff_l2
parent fiberSeqCompendium_PM00007_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel THP-1 p < 0.001
longLabel THP-1 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00007_cpgDiff_l3
parent fiberSeqCompendium_PM00007_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00007/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel THP-1 p < 0.0001
longLabel THP-1 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00008_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/all.percent.accessible.bw
shortLabel Hap1 Acc
longLabel Hap1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 61
track fiberSeqCompendium_PM00008_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/fire-peaks.ucsc.bb
shortLabel Hap1 Peaks
longLabel Hap1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Hap1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 62
track fiberSeqCompendium_PM00008_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Hap1 Hap1/2
longLabel Hap1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 63
track fiberSeqCompendium_PM00008_hap_h1
parent fiberSeqCompendium_PM00008_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/hap1.percent.accessible.bw
color 0,114,178
shortLabel Hap1 Hap1
longLabel Hap1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00008_hap_h2
parent fiberSeqCompendium_PM00008_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/hap2.percent.accessible.bw
color 213,94,0
shortLabel Hap1 Hap2
longLabel Hap1 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00008_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.combined.bw
shortLabel Hap1 CpG
longLabel Hap1 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 64
track fiberSeqCompendium_PM00008_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Hap1 CpG Hap1/2
longLabel Hap1 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 65
track fiberSeqCompendium_PM00008_cpgHap_h1
parent fiberSeqCompendium_PM00008_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.hap1.bw
color 0,114,178
shortLabel Hap1 Hap1
longLabel Hap1 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00008_cpgHap_h2
parent fiberSeqCompendium_PM00008_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.hap2.bw
color 213,94,0
shortLabel Hap1 Hap2
longLabel Hap1 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00008_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel Hap1 CpG diff
longLabel Hap1 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 66
track fiberSeqCompendium_PM00008_cpgDiff_l0
parent fiberSeqCompendium_PM00008_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_all.bw
color 137,143,143
shortLabel Hap1 All
longLabel Hap1 CpG haplotype difference, All
track fiberSeqCompendium_PM00008_cpgDiff_l1
parent fiberSeqCompendium_PM00008_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Hap1 p < 0.01
longLabel Hap1 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00008_cpgDiff_l2
parent fiberSeqCompendium_PM00008_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Hap1 p < 0.001
longLabel Hap1 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00008_cpgDiff_l3
parent fiberSeqCompendium_PM00008_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00008/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Hap1 p < 0.0001
longLabel Hap1 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00009_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/all.percent.accessible.bw
shortLabel Jurkat Acc
longLabel Jurkat Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 71
track fiberSeqCompendium_PM00009_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/fire-peaks.ucsc.bb
shortLabel Jurkat Peaks
longLabel Jurkat Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Jurkat FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 72
track fiberSeqCompendium_PM00009_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Jurkat Hap1/2
longLabel Jurkat Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 73
track fiberSeqCompendium_PM00009_hap_h1
parent fiberSeqCompendium_PM00009_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/hap1.percent.accessible.bw
color 0,114,178
shortLabel Jurkat Hap1
longLabel Jurkat Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00009_hap_h2
parent fiberSeqCompendium_PM00009_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/hap2.percent.accessible.bw
color 213,94,0
shortLabel Jurkat Hap2
longLabel Jurkat Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00009_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.combined.bw
shortLabel Jurkat CpG
longLabel Jurkat CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 74
track fiberSeqCompendium_PM00009_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Jurkat CpG Hap1/2
longLabel Jurkat CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 75
track fiberSeqCompendium_PM00009_cpgHap_h1
parent fiberSeqCompendium_PM00009_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.hap1.bw
color 0,114,178
shortLabel Jurkat Hap1
longLabel Jurkat CpG methylation, haplotype 1
track fiberSeqCompendium_PM00009_cpgHap_h2
parent fiberSeqCompendium_PM00009_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.hap2.bw
color 213,94,0
shortLabel Jurkat Hap2
longLabel Jurkat CpG methylation, haplotype 2
track fiberSeqCompendium_PM00009_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel Jurkat CpG diff
longLabel Jurkat CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 76
track fiberSeqCompendium_PM00009_cpgDiff_l0
parent fiberSeqCompendium_PM00009_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_all.bw
color 137,143,143
shortLabel Jurkat All
longLabel Jurkat CpG haplotype difference, All
track fiberSeqCompendium_PM00009_cpgDiff_l1
parent fiberSeqCompendium_PM00009_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Jurkat p < 0.01
longLabel Jurkat CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00009_cpgDiff_l2
parent fiberSeqCompendium_PM00009_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Jurkat p < 0.001
longLabel Jurkat CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00009_cpgDiff_l3
parent fiberSeqCompendium_PM00009_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00009/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Jurkat p < 0.0001
longLabel Jurkat CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00010_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/all.percent.accessible.bw
shortLabel H1 Acc
longLabel H1 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 81
track fiberSeqCompendium_PM00010_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/fire-peaks.ucsc.bb
shortLabel H1 Peaks
longLabel H1 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver H1 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 82
track fiberSeqCompendium_PM00010_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel H1 Hap1/2
longLabel H1 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 83
track fiberSeqCompendium_PM00010_hap_h1
parent fiberSeqCompendium_PM00010_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/hap1.percent.accessible.bw
color 0,114,178
shortLabel H1 Hap1
longLabel H1 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00010_hap_h2
parent fiberSeqCompendium_PM00010_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/hap2.percent.accessible.bw
color 213,94,0
shortLabel H1 Hap2
longLabel H1 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00010_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.combined.bw
shortLabel H1 CpG
longLabel H1 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 84
track fiberSeqCompendium_PM00010_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel H1 CpG Hap1/2
longLabel H1 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 85
track fiberSeqCompendium_PM00010_cpgHap_h1
parent fiberSeqCompendium_PM00010_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap1.bw
color 0,114,178
shortLabel H1 Hap1
longLabel H1 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00010_cpgHap_h2
parent fiberSeqCompendium_PM00010_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.hap2.bw
color 213,94,0
shortLabel H1 Hap2
longLabel H1 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00010_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel H1 CpG diff
longLabel H1 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 86
track fiberSeqCompendium_PM00010_cpgDiff_l0
parent fiberSeqCompendium_PM00010_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_all.bw
color 137,143,143
shortLabel H1 All
longLabel H1 CpG haplotype difference, All
track fiberSeqCompendium_PM00010_cpgDiff_l1
parent fiberSeqCompendium_PM00010_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel H1 p < 0.01
longLabel H1 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00010_cpgDiff_l2
parent fiberSeqCompendium_PM00010_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel H1 p < 0.001
longLabel H1 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00010_cpgDiff_l3
parent fiberSeqCompendium_PM00010_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00010/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel H1 p < 0.0001
longLabel H1 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00011_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/all.percent.accessible.bw
shortLabel H9 Acc
longLabel H9 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 91
track fiberSeqCompendium_PM00011_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/fire-peaks.ucsc.bb
shortLabel H9 Peaks
longLabel H9 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver H9 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 92
track fiberSeqCompendium_PM00011_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel H9 Hap1/2
longLabel H9 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 93
track fiberSeqCompendium_PM00011_hap_h1
parent fiberSeqCompendium_PM00011_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/hap1.percent.accessible.bw
color 0,114,178
shortLabel H9 Hap1
longLabel H9 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00011_hap_h2
parent fiberSeqCompendium_PM00011_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/hap2.percent.accessible.bw
color 213,94,0
shortLabel H9 Hap2
longLabel H9 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00011_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.combined.bw
shortLabel H9 CpG
longLabel H9 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 94
track fiberSeqCompendium_PM00011_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel H9 CpG Hap1/2
longLabel H9 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 95
track fiberSeqCompendium_PM00011_cpgHap_h1
parent fiberSeqCompendium_PM00011_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.hap1.bw
color 0,114,178
shortLabel H9 Hap1
longLabel H9 CpG methylation, haplotype 1
track fiberSeqCompendium_PM00011_cpgHap_h2
parent fiberSeqCompendium_PM00011_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.hap2.bw
color 213,94,0
shortLabel H9 Hap2
longLabel H9 CpG methylation, haplotype 2
track fiberSeqCompendium_PM00011_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel H9 CpG diff
longLabel H9 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 96
track fiberSeqCompendium_PM00011_cpgDiff_l0
parent fiberSeqCompendium_PM00011_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_all.bw
color 137,143,143
shortLabel H9 All
longLabel H9 CpG haplotype difference, All
track fiberSeqCompendium_PM00011_cpgDiff_l1
parent fiberSeqCompendium_PM00011_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel H9 p < 0.01
longLabel H9 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00011_cpgDiff_l2
parent fiberSeqCompendium_PM00011_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel H9 p < 0.001
longLabel H9 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00011_cpgDiff_l3
parent fiberSeqCompendium_PM00011_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00011/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel H9 p < 0.0001
longLabel H9 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PM00012_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/all.percent.accessible.bw
shortLabel Hek293T Acc
longLabel Hek293T Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 101
track fiberSeqCompendium_PM00012_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/fire-peaks.ucsc.bb
shortLabel Hek293T Peaks
longLabel Hek293T Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Hek293T FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 102
track fiberSeqCompendium_PM00012_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Hek293T Hap1/2
longLabel Hek293T Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 103
track fiberSeqCompendium_PM00012_hap_h1
parent fiberSeqCompendium_PM00012_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/hap1.percent.accessible.bw
color 0,114,178
shortLabel Hek293T Hap1
longLabel Hek293T Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PM00012_hap_h2
parent fiberSeqCompendium_PM00012_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/hap2.percent.accessible.bw
color 213,94,0
shortLabel Hek293T Hap2
longLabel Hek293T Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PM00012_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.combined.bw
shortLabel Hek293T CpG
longLabel Hek293T CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 104
track fiberSeqCompendium_PM00012_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Hek293T CpG Hap1/2
longLabel Hek293T CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 105
track fiberSeqCompendium_PM00012_cpgHap_h1
parent fiberSeqCompendium_PM00012_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap1.bw
color 0,114,178
shortLabel Hek293T Hap1
longLabel Hek293T CpG methylation, haplotype 1
track fiberSeqCompendium_PM00012_cpgHap_h2
parent fiberSeqCompendium_PM00012_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.hap2.bw
color 213,94,0
shortLabel Hek293T Hap2
longLabel Hek293T CpG methylation, haplotype 2
track fiberSeqCompendium_PM00012_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel Hek293T CpG diff
longLabel Hek293T CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 106
track fiberSeqCompendium_PM00012_cpgDiff_l0
parent fiberSeqCompendium_PM00012_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_all.bw
color 137,143,143
shortLabel Hek293T All
longLabel Hek293T CpG haplotype difference, All
track fiberSeqCompendium_PM00012_cpgDiff_l1
parent fiberSeqCompendium_PM00012_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Hek293T p < 0.01
longLabel Hek293T CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PM00012_cpgDiff_l2
parent fiberSeqCompendium_PM00012_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Hek293T p < 0.001
longLabel Hek293T CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PM00012_cpgDiff_l3
parent fiberSeqCompendium_PM00012_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PM00012/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Hek293T p < 0.0001
longLabel Hek293T CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00971_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/all.percent.accessible.bw
shortLabel HG01123 Acc
longLabel HG01123 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 111
track fiberSeqCompendium_PS00971_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/fire-peaks.ucsc.bb
shortLabel HG01123 Peaks
longLabel HG01123 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01123 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 112
track fiberSeqCompendium_PS00971_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01123 Hap1/2
longLabel HG01123 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 113
track fiberSeqCompendium_PS00971_hap_h1
parent fiberSeqCompendium_PS00971_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01123 Hap1
longLabel HG01123 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00971_hap_h2
parent fiberSeqCompendium_PS00971_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01123 Hap2
longLabel HG01123 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00971_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.combined.bw
shortLabel HG01123 CpG
longLabel HG01123 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 114
track fiberSeqCompendium_PS00971_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG01123 CpG Hap1/2
longLabel HG01123 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 115
track fiberSeqCompendium_PS00971_cpgHap_h1
parent fiberSeqCompendium_PS00971_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap1.bw
color 0,114,178
shortLabel HG01123 Hap1
longLabel HG01123 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00971_cpgHap_h2
parent fiberSeqCompendium_PS00971_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.hap2.bw
color 213,94,0
shortLabel HG01123 Hap2
longLabel HG01123 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00971_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG01123 CpG diff
longLabel HG01123 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 116
track fiberSeqCompendium_PS00971_cpgDiff_l0
parent fiberSeqCompendium_PS00971_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_all.bw
color 137,143,143
shortLabel HG01123 All
longLabel HG01123 CpG haplotype difference, All
track fiberSeqCompendium_PS00971_cpgDiff_l1
parent fiberSeqCompendium_PS00971_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG01123 p < 0.01
longLabel HG01123 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00971_cpgDiff_l2
parent fiberSeqCompendium_PS00971_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG01123 p < 0.001
longLabel HG01123 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00971_cpgDiff_l3
parent fiberSeqCompendium_PS00971_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00971/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG01123 p < 0.0001
longLabel HG01123 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00972_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/all.percent.accessible.bw
shortLabel HG01258 Acc
longLabel HG01258 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 121
track fiberSeqCompendium_PS00972_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/fire-peaks.ucsc.bb
shortLabel HG01258 Peaks
longLabel HG01258 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01258 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 122
track fiberSeqCompendium_PS00972_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01258 Hap1/2
longLabel HG01258 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 123
track fiberSeqCompendium_PS00972_hap_h1
parent fiberSeqCompendium_PS00972_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01258 Hap1
longLabel HG01258 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00972_hap_h2
parent fiberSeqCompendium_PS00972_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01258 Hap2
longLabel HG01258 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00972_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.combined.bw
shortLabel HG01258 CpG
longLabel HG01258 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 124
track fiberSeqCompendium_PS00972_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG01258 CpG Hap1/2
longLabel HG01258 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 125
track fiberSeqCompendium_PS00972_cpgHap_h1
parent fiberSeqCompendium_PS00972_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.hap1.bw
color 0,114,178
shortLabel HG01258 Hap1
longLabel HG01258 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00972_cpgHap_h2
parent fiberSeqCompendium_PS00972_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.hap2.bw
color 213,94,0
shortLabel HG01258 Hap2
longLabel HG01258 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00972_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG01258 CpG diff
longLabel HG01258 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 126
track fiberSeqCompendium_PS00972_cpgDiff_l0
parent fiberSeqCompendium_PS00972_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_all.bw
color 137,143,143
shortLabel HG01258 All
longLabel HG01258 CpG haplotype difference, All
track fiberSeqCompendium_PS00972_cpgDiff_l1
parent fiberSeqCompendium_PS00972_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG01258 p < 0.01
longLabel HG01258 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00972_cpgDiff_l2
parent fiberSeqCompendium_PS00972_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG01258 p < 0.001
longLabel HG01258 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00972_cpgDiff_l3
parent fiberSeqCompendium_PS00972_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00972/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG01258 p < 0.0001
longLabel HG01258 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00973_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/all.percent.accessible.bw
shortLabel HG01358 Acc
longLabel HG01358 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 131
track fiberSeqCompendium_PS00973_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/fire-peaks.ucsc.bb
shortLabel HG01358 Peaks
longLabel HG01358 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01358 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 132
track fiberSeqCompendium_PS00973_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01358 Hap1/2
longLabel HG01358 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 133
track fiberSeqCompendium_PS00973_hap_h1
parent fiberSeqCompendium_PS00973_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01358 Hap1
longLabel HG01358 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00973_hap_h2
parent fiberSeqCompendium_PS00973_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01358 Hap2
longLabel HG01358 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00973_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.combined.bw
shortLabel HG01358 CpG
longLabel HG01358 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 134
track fiberSeqCompendium_PS00973_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG01358 CpG Hap1/2
longLabel HG01358 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 135
track fiberSeqCompendium_PS00973_cpgHap_h1
parent fiberSeqCompendium_PS00973_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.hap1.bw
color 0,114,178
shortLabel HG01358 Hap1
longLabel HG01358 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00973_cpgHap_h2
parent fiberSeqCompendium_PS00973_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.hap2.bw
color 213,94,0
shortLabel HG01358 Hap2
longLabel HG01358 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00973_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG01358 CpG diff
longLabel HG01358 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 136
track fiberSeqCompendium_PS00973_cpgDiff_l0
parent fiberSeqCompendium_PS00973_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_all.bw
color 137,143,143
shortLabel HG01358 All
longLabel HG01358 CpG haplotype difference, All
track fiberSeqCompendium_PS00973_cpgDiff_l1
parent fiberSeqCompendium_PS00973_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG01358 p < 0.01
longLabel HG01358 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00973_cpgDiff_l2
parent fiberSeqCompendium_PS00973_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG01358 p < 0.001
longLabel HG01358 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00973_cpgDiff_l3
parent fiberSeqCompendium_PS00973_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00973/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG01358 p < 0.0001
longLabel HG01358 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00974_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/all.percent.accessible.bw
shortLabel HG01361 Acc
longLabel HG01361 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 141
track fiberSeqCompendium_PS00974_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/fire-peaks.ucsc.bb
shortLabel HG01361 Peaks
longLabel HG01361 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01361 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 142
track fiberSeqCompendium_PS00974_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01361 Hap1/2
longLabel HG01361 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 143
track fiberSeqCompendium_PS00974_hap_h1
parent fiberSeqCompendium_PS00974_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01361 Hap1
longLabel HG01361 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00974_hap_h2
parent fiberSeqCompendium_PS00974_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01361 Hap2
longLabel HG01361 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00974_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.combined.bw
shortLabel HG01361 CpG
longLabel HG01361 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 144
track fiberSeqCompendium_PS00974_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG01361 CpG Hap1/2
longLabel HG01361 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 145
track fiberSeqCompendium_PS00974_cpgHap_h1
parent fiberSeqCompendium_PS00974_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.hap1.bw
color 0,114,178
shortLabel HG01361 Hap1
longLabel HG01361 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00974_cpgHap_h2
parent fiberSeqCompendium_PS00974_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.hap2.bw
color 213,94,0
shortLabel HG01361 Hap2
longLabel HG01361 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00974_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG01361 CpG diff
longLabel HG01361 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 146
track fiberSeqCompendium_PS00974_cpgDiff_l0
parent fiberSeqCompendium_PS00974_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_all.bw
color 137,143,143
shortLabel HG01361 All
longLabel HG01361 CpG haplotype difference, All
track fiberSeqCompendium_PS00974_cpgDiff_l1
parent fiberSeqCompendium_PS00974_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG01361 p < 0.01
longLabel HG01361 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00974_cpgDiff_l2
parent fiberSeqCompendium_PS00974_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG01361 p < 0.001
longLabel HG01361 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00974_cpgDiff_l3
parent fiberSeqCompendium_PS00974_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00974/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG01361 p < 0.0001
longLabel HG01361 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00975_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/all.percent.accessible.bw
shortLabel HG01891 Acc
longLabel HG01891 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 151
track fiberSeqCompendium_PS00975_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/fire-peaks.ucsc.bb
shortLabel HG01891 Peaks
longLabel HG01891 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG01891 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 152
track fiberSeqCompendium_PS00975_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG01891 Hap1/2
longLabel HG01891 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 153
track fiberSeqCompendium_PS00975_hap_h1
parent fiberSeqCompendium_PS00975_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG01891 Hap1
longLabel HG01891 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00975_hap_h2
parent fiberSeqCompendium_PS00975_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG01891 Hap2
longLabel HG01891 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00975_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.combined.bw
shortLabel HG01891 CpG
longLabel HG01891 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 154
track fiberSeqCompendium_PS00975_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG01891 CpG Hap1/2
longLabel HG01891 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 155
track fiberSeqCompendium_PS00975_cpgHap_h1
parent fiberSeqCompendium_PS00975_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.hap1.bw
color 0,114,178
shortLabel HG01891 Hap1
longLabel HG01891 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00975_cpgHap_h2
parent fiberSeqCompendium_PS00975_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.hap2.bw
color 213,94,0
shortLabel HG01891 Hap2
longLabel HG01891 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00975_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG01891 CpG diff
longLabel HG01891 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 156
track fiberSeqCompendium_PS00975_cpgDiff_l0
parent fiberSeqCompendium_PS00975_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_all.bw
color 137,143,143
shortLabel HG01891 All
longLabel HG01891 CpG haplotype difference, All
track fiberSeqCompendium_PS00975_cpgDiff_l1
parent fiberSeqCompendium_PS00975_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG01891 p < 0.01
longLabel HG01891 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00975_cpgDiff_l2
parent fiberSeqCompendium_PS00975_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG01891 p < 0.001
longLabel HG01891 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00975_cpgDiff_l3
parent fiberSeqCompendium_PS00975_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00975/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG01891 p < 0.0001
longLabel HG01891 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00976_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/all.percent.accessible.bw
shortLabel HG02071 Acc
longLabel HG02071 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 161
track fiberSeqCompendium_PS00976_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/fire-peaks.ucsc.bb
shortLabel HG02071 Peaks
longLabel HG02071 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02071 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 162
track fiberSeqCompendium_PS00976_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02071 Hap1/2
longLabel HG02071 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 163
track fiberSeqCompendium_PS00976_hap_h1
parent fiberSeqCompendium_PS00976_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02071 Hap1
longLabel HG02071 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00976_hap_h2
parent fiberSeqCompendium_PS00976_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02071 Hap2
longLabel HG02071 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00976_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.combined.bw
shortLabel HG02071 CpG
longLabel HG02071 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 164
track fiberSeqCompendium_PS00976_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02071 CpG Hap1/2
longLabel HG02071 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 165
track fiberSeqCompendium_PS00976_cpgHap_h1
parent fiberSeqCompendium_PS00976_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.hap1.bw
color 0,114,178
shortLabel HG02071 Hap1
longLabel HG02071 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00976_cpgHap_h2
parent fiberSeqCompendium_PS00976_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.hap2.bw
color 213,94,0
shortLabel HG02071 Hap2
longLabel HG02071 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00976_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02071 CpG diff
longLabel HG02071 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 166
track fiberSeqCompendium_PS00976_cpgDiff_l0
parent fiberSeqCompendium_PS00976_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02071 All
longLabel HG02071 CpG haplotype difference, All
track fiberSeqCompendium_PS00976_cpgDiff_l1
parent fiberSeqCompendium_PS00976_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02071 p < 0.01
longLabel HG02071 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00976_cpgDiff_l2
parent fiberSeqCompendium_PS00976_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02071 p < 0.001
longLabel HG02071 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00976_cpgDiff_l3
parent fiberSeqCompendium_PS00976_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00976/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02071 p < 0.0001
longLabel HG02071 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00977_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/all.percent.accessible.bw
shortLabel HG02074 Acc
longLabel HG02074 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 171
track fiberSeqCompendium_PS00977_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/fire-peaks.ucsc.bb
shortLabel HG02074 Peaks
longLabel HG02074 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02074 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 172
track fiberSeqCompendium_PS00977_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02074 Hap1/2
longLabel HG02074 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 173
track fiberSeqCompendium_PS00977_hap_h1
parent fiberSeqCompendium_PS00977_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02074 Hap1
longLabel HG02074 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00977_hap_h2
parent fiberSeqCompendium_PS00977_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02074 Hap2
longLabel HG02074 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00977_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.combined.bw
shortLabel HG02074 CpG
longLabel HG02074 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 174
track fiberSeqCompendium_PS00977_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02074 CpG Hap1/2
longLabel HG02074 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 175
track fiberSeqCompendium_PS00977_cpgHap_h1
parent fiberSeqCompendium_PS00977_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.hap1.bw
color 0,114,178
shortLabel HG02074 Hap1
longLabel HG02074 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00977_cpgHap_h2
parent fiberSeqCompendium_PS00977_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.hap2.bw
color 213,94,0
shortLabel HG02074 Hap2
longLabel HG02074 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00977_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02074 CpG diff
longLabel HG02074 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 176
track fiberSeqCompendium_PS00977_cpgDiff_l0
parent fiberSeqCompendium_PS00977_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02074 All
longLabel HG02074 CpG haplotype difference, All
track fiberSeqCompendium_PS00977_cpgDiff_l1
parent fiberSeqCompendium_PS00977_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02074 p < 0.01
longLabel HG02074 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00977_cpgDiff_l2
parent fiberSeqCompendium_PS00977_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02074 p < 0.001
longLabel HG02074 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00977_cpgDiff_l3
parent fiberSeqCompendium_PS00977_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00977/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02074 p < 0.0001
longLabel HG02074 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00978_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/all.percent.accessible.bw
shortLabel HG02132 Acc
longLabel HG02132 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 181
track fiberSeqCompendium_PS00978_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/fire-peaks.ucsc.bb
shortLabel HG02132 Peaks
longLabel HG02132 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02132 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 182
track fiberSeqCompendium_PS00978_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02132 Hap1/2
longLabel HG02132 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 183
track fiberSeqCompendium_PS00978_hap_h1
parent fiberSeqCompendium_PS00978_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02132 Hap1
longLabel HG02132 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00978_hap_h2
parent fiberSeqCompendium_PS00978_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02132 Hap2
longLabel HG02132 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00978_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.combined.bw
shortLabel HG02132 CpG
longLabel HG02132 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 184
track fiberSeqCompendium_PS00978_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02132 CpG Hap1/2
longLabel HG02132 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 185
track fiberSeqCompendium_PS00978_cpgHap_h1
parent fiberSeqCompendium_PS00978_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.hap1.bw
color 0,114,178
shortLabel HG02132 Hap1
longLabel HG02132 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00978_cpgHap_h2
parent fiberSeqCompendium_PS00978_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.hap2.bw
color 213,94,0
shortLabel HG02132 Hap2
longLabel HG02132 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00978_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02132 CpG diff
longLabel HG02132 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 186
track fiberSeqCompendium_PS00978_cpgDiff_l0
parent fiberSeqCompendium_PS00978_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02132 All
longLabel HG02132 CpG haplotype difference, All
track fiberSeqCompendium_PS00978_cpgDiff_l1
parent fiberSeqCompendium_PS00978_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02132 p < 0.01
longLabel HG02132 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00978_cpgDiff_l2
parent fiberSeqCompendium_PS00978_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02132 p < 0.001
longLabel HG02132 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00978_cpgDiff_l3
parent fiberSeqCompendium_PS00978_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00978/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02132 p < 0.0001
longLabel HG02132 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00979_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/all.percent.accessible.bw
shortLabel HG02135 Acc
longLabel HG02135 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 191
track fiberSeqCompendium_PS00979_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/fire-peaks.ucsc.bb
shortLabel HG02135 Peaks
longLabel HG02135 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02135 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 192
track fiberSeqCompendium_PS00979_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02135 Hap1/2
longLabel HG02135 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 193
track fiberSeqCompendium_PS00979_hap_h1
parent fiberSeqCompendium_PS00979_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02135 Hap1
longLabel HG02135 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00979_hap_h2
parent fiberSeqCompendium_PS00979_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02135 Hap2
longLabel HG02135 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00979_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.combined.bw
shortLabel HG02135 CpG
longLabel HG02135 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 194
track fiberSeqCompendium_PS00979_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02135 CpG Hap1/2
longLabel HG02135 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 195
track fiberSeqCompendium_PS00979_cpgHap_h1
parent fiberSeqCompendium_PS00979_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.hap1.bw
color 0,114,178
shortLabel HG02135 Hap1
longLabel HG02135 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00979_cpgHap_h2
parent fiberSeqCompendium_PS00979_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.hap2.bw
color 213,94,0
shortLabel HG02135 Hap2
longLabel HG02135 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00979_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02135 CpG diff
longLabel HG02135 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 196
track fiberSeqCompendium_PS00979_cpgDiff_l0
parent fiberSeqCompendium_PS00979_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02135 All
longLabel HG02135 CpG haplotype difference, All
track fiberSeqCompendium_PS00979_cpgDiff_l1
parent fiberSeqCompendium_PS00979_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02135 p < 0.01
longLabel HG02135 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00979_cpgDiff_l2
parent fiberSeqCompendium_PS00979_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02135 p < 0.001
longLabel HG02135 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00979_cpgDiff_l3
parent fiberSeqCompendium_PS00979_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00979/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02135 p < 0.0001
longLabel HG02135 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00980_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/all.percent.accessible.bw
shortLabel HG02257 Acc
longLabel HG02257 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 201
track fiberSeqCompendium_PS00980_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/fire-peaks.ucsc.bb
shortLabel HG02257 Peaks
longLabel HG02257 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02257 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 202
track fiberSeqCompendium_PS00980_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02257 Hap1/2
longLabel HG02257 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 203
track fiberSeqCompendium_PS00980_hap_h1
parent fiberSeqCompendium_PS00980_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02257 Hap1
longLabel HG02257 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00980_hap_h2
parent fiberSeqCompendium_PS00980_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02257 Hap2
longLabel HG02257 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00980_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.combined.bw
shortLabel HG02257 CpG
longLabel HG02257 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 204
track fiberSeqCompendium_PS00980_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02257 CpG Hap1/2
longLabel HG02257 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 205
track fiberSeqCompendium_PS00980_cpgHap_h1
parent fiberSeqCompendium_PS00980_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.hap1.bw
color 0,114,178
shortLabel HG02257 Hap1
longLabel HG02257 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00980_cpgHap_h2
parent fiberSeqCompendium_PS00980_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.hap2.bw
color 213,94,0
shortLabel HG02257 Hap2
longLabel HG02257 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00980_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02257 CpG diff
longLabel HG02257 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 206
track fiberSeqCompendium_PS00980_cpgDiff_l0
parent fiberSeqCompendium_PS00980_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02257 All
longLabel HG02257 CpG haplotype difference, All
track fiberSeqCompendium_PS00980_cpgDiff_l1
parent fiberSeqCompendium_PS00980_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02257 p < 0.01
longLabel HG02257 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00980_cpgDiff_l2
parent fiberSeqCompendium_PS00980_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02257 p < 0.001
longLabel HG02257 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00980_cpgDiff_l3
parent fiberSeqCompendium_PS00980_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00980/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02257 p < 0.0001
longLabel HG02257 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00981_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/all.percent.accessible.bw
shortLabel HG02486 Acc
longLabel HG02486 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 211
track fiberSeqCompendium_PS00981_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/fire-peaks.ucsc.bb
shortLabel HG02486 Peaks
longLabel HG02486 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02486 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 212
track fiberSeqCompendium_PS00981_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02486 Hap1/2
longLabel HG02486 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 213
track fiberSeqCompendium_PS00981_hap_h1
parent fiberSeqCompendium_PS00981_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02486 Hap1
longLabel HG02486 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00981_hap_h2
parent fiberSeqCompendium_PS00981_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02486 Hap2
longLabel HG02486 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00981_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.combined.bw
shortLabel HG02486 CpG
longLabel HG02486 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 214
track fiberSeqCompendium_PS00981_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02486 CpG Hap1/2
longLabel HG02486 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 215
track fiberSeqCompendium_PS00981_cpgHap_h1
parent fiberSeqCompendium_PS00981_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.hap1.bw
color 0,114,178
shortLabel HG02486 Hap1
longLabel HG02486 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00981_cpgHap_h2
parent fiberSeqCompendium_PS00981_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.hap2.bw
color 213,94,0
shortLabel HG02486 Hap2
longLabel HG02486 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00981_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02486 CpG diff
longLabel HG02486 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 216
track fiberSeqCompendium_PS00981_cpgDiff_l0
parent fiberSeqCompendium_PS00981_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02486 All
longLabel HG02486 CpG haplotype difference, All
track fiberSeqCompendium_PS00981_cpgDiff_l1
parent fiberSeqCompendium_PS00981_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02486 p < 0.01
longLabel HG02486 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00981_cpgDiff_l2
parent fiberSeqCompendium_PS00981_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02486 p < 0.001
longLabel HG02486 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00981_cpgDiff_l3
parent fiberSeqCompendium_PS00981_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00981/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02486 p < 0.0001
longLabel HG02486 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00982_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/all.percent.accessible.bw
shortLabel HG02559 Acc
longLabel HG02559 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 221
track fiberSeqCompendium_PS00982_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/fire-peaks.ucsc.bb
shortLabel HG02559 Peaks
longLabel HG02559 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02559 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 222
track fiberSeqCompendium_PS00982_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02559 Hap1/2
longLabel HG02559 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 223
track fiberSeqCompendium_PS00982_hap_h1
parent fiberSeqCompendium_PS00982_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02559 Hap1
longLabel HG02559 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00982_hap_h2
parent fiberSeqCompendium_PS00982_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02559 Hap2
longLabel HG02559 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00982_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.combined.bw
shortLabel HG02559 CpG
longLabel HG02559 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 224
track fiberSeqCompendium_PS00982_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02559 CpG Hap1/2
longLabel HG02559 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 225
track fiberSeqCompendium_PS00982_cpgHap_h1
parent fiberSeqCompendium_PS00982_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.hap1.bw
color 0,114,178
shortLabel HG02559 Hap1
longLabel HG02559 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00982_cpgHap_h2
parent fiberSeqCompendium_PS00982_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.hap2.bw
color 213,94,0
shortLabel HG02559 Hap2
longLabel HG02559 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00982_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02559 CpG diff
longLabel HG02559 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 226
track fiberSeqCompendium_PS00982_cpgDiff_l0
parent fiberSeqCompendium_PS00982_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02559 All
longLabel HG02559 CpG haplotype difference, All
track fiberSeqCompendium_PS00982_cpgDiff_l1
parent fiberSeqCompendium_PS00982_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02559 p < 0.01
longLabel HG02559 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00982_cpgDiff_l2
parent fiberSeqCompendium_PS00982_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02559 p < 0.001
longLabel HG02559 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00982_cpgDiff_l3
parent fiberSeqCompendium_PS00982_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00982/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02559 p < 0.0001
longLabel HG02559 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00983_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/all.percent.accessible.bw
shortLabel HG02572 Acc
longLabel HG02572 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 231
track fiberSeqCompendium_PS00983_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/fire-peaks.ucsc.bb
shortLabel HG02572 Peaks
longLabel HG02572 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02572 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 232
track fiberSeqCompendium_PS00983_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02572 Hap1/2
longLabel HG02572 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 233
track fiberSeqCompendium_PS00983_hap_h1
parent fiberSeqCompendium_PS00983_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02572 Hap1
longLabel HG02572 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00983_hap_h2
parent fiberSeqCompendium_PS00983_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02572 Hap2
longLabel HG02572 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00983_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.combined.bw
shortLabel HG02572 CpG
longLabel HG02572 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 234
track fiberSeqCompendium_PS00983_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02572 CpG Hap1/2
longLabel HG02572 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 235
track fiberSeqCompendium_PS00983_cpgHap_h1
parent fiberSeqCompendium_PS00983_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.hap1.bw
color 0,114,178
shortLabel HG02572 Hap1
longLabel HG02572 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00983_cpgHap_h2
parent fiberSeqCompendium_PS00983_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.hap2.bw
color 213,94,0
shortLabel HG02572 Hap2
longLabel HG02572 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00983_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02572 CpG diff
longLabel HG02572 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 236
track fiberSeqCompendium_PS00983_cpgDiff_l0
parent fiberSeqCompendium_PS00983_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02572 All
longLabel HG02572 CpG haplotype difference, All
track fiberSeqCompendium_PS00983_cpgDiff_l1
parent fiberSeqCompendium_PS00983_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02572 p < 0.01
longLabel HG02572 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00983_cpgDiff_l2
parent fiberSeqCompendium_PS00983_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02572 p < 0.001
longLabel HG02572 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00983_cpgDiff_l3
parent fiberSeqCompendium_PS00983_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00983/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02572 p < 0.0001
longLabel HG02572 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00984_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/all.percent.accessible.bw
shortLabel HG02717 Acc
longLabel HG02717 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 241
track fiberSeqCompendium_PS00984_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/fire-peaks.ucsc.bb
shortLabel HG02717 Peaks
longLabel HG02717 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02717 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 242
track fiberSeqCompendium_PS00984_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02717 Hap1/2
longLabel HG02717 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 243
track fiberSeqCompendium_PS00984_hap_h1
parent fiberSeqCompendium_PS00984_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02717 Hap1
longLabel HG02717 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00984_hap_h2
parent fiberSeqCompendium_PS00984_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02717 Hap2
longLabel HG02717 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00984_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.combined.bw
shortLabel HG02717 CpG
longLabel HG02717 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 244
track fiberSeqCompendium_PS00984_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02717 CpG Hap1/2
longLabel HG02717 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 245
track fiberSeqCompendium_PS00984_cpgHap_h1
parent fiberSeqCompendium_PS00984_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.hap1.bw
color 0,114,178
shortLabel HG02717 Hap1
longLabel HG02717 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00984_cpgHap_h2
parent fiberSeqCompendium_PS00984_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.hap2.bw
color 213,94,0
shortLabel HG02717 Hap2
longLabel HG02717 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00984_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02717 CpG diff
longLabel HG02717 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 246
track fiberSeqCompendium_PS00984_cpgDiff_l0
parent fiberSeqCompendium_PS00984_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02717 All
longLabel HG02717 CpG haplotype difference, All
track fiberSeqCompendium_PS00984_cpgDiff_l1
parent fiberSeqCompendium_PS00984_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02717 p < 0.01
longLabel HG02717 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00984_cpgDiff_l2
parent fiberSeqCompendium_PS00984_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02717 p < 0.001
longLabel HG02717 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00984_cpgDiff_l3
parent fiberSeqCompendium_PS00984_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00984/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02717 p < 0.0001
longLabel HG02717 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00985_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/all.percent.accessible.bw
shortLabel HG02886 Acc
longLabel HG02886 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 251
track fiberSeqCompendium_PS00985_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/fire-peaks.ucsc.bb
shortLabel HG02886 Peaks
longLabel HG02886 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG02886 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 252
track fiberSeqCompendium_PS00985_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG02886 Hap1/2
longLabel HG02886 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 253
track fiberSeqCompendium_PS00985_hap_h1
parent fiberSeqCompendium_PS00985_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG02886 Hap1
longLabel HG02886 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00985_hap_h2
parent fiberSeqCompendium_PS00985_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG02886 Hap2
longLabel HG02886 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00985_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.combined.bw
shortLabel HG02886 CpG
longLabel HG02886 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 254
track fiberSeqCompendium_PS00985_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG02886 CpG Hap1/2
longLabel HG02886 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 255
track fiberSeqCompendium_PS00985_cpgHap_h1
parent fiberSeqCompendium_PS00985_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.hap1.bw
color 0,114,178
shortLabel HG02886 Hap1
longLabel HG02886 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00985_cpgHap_h2
parent fiberSeqCompendium_PS00985_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.hap2.bw
color 213,94,0
shortLabel HG02886 Hap2
longLabel HG02886 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00985_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG02886 CpG diff
longLabel HG02886 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 256
track fiberSeqCompendium_PS00985_cpgDiff_l0
parent fiberSeqCompendium_PS00985_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_all.bw
color 137,143,143
shortLabel HG02886 All
longLabel HG02886 CpG haplotype difference, All
track fiberSeqCompendium_PS00985_cpgDiff_l1
parent fiberSeqCompendium_PS00985_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG02886 p < 0.01
longLabel HG02886 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00985_cpgDiff_l2
parent fiberSeqCompendium_PS00985_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG02886 p < 0.001
longLabel HG02886 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00985_cpgDiff_l3
parent fiberSeqCompendium_PS00985_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00985/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG02886 p < 0.0001
longLabel HG02886 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00986_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/all.percent.accessible.bw
shortLabel HG03516 Acc
longLabel HG03516 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 261
track fiberSeqCompendium_PS00986_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/fire-peaks.ucsc.bb
shortLabel HG03516 Peaks
longLabel HG03516 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG03516 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 262
track fiberSeqCompendium_PS00986_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG03516 Hap1/2
longLabel HG03516 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 263
track fiberSeqCompendium_PS00986_hap_h1
parent fiberSeqCompendium_PS00986_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG03516 Hap1
longLabel HG03516 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00986_hap_h2
parent fiberSeqCompendium_PS00986_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG03516 Hap2
longLabel HG03516 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00986_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.combined.bw
shortLabel HG03516 CpG
longLabel HG03516 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 264
track fiberSeqCompendium_PS00986_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG03516 CpG Hap1/2
longLabel HG03516 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 265
track fiberSeqCompendium_PS00986_cpgHap_h1
parent fiberSeqCompendium_PS00986_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.hap1.bw
color 0,114,178
shortLabel HG03516 Hap1
longLabel HG03516 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00986_cpgHap_h2
parent fiberSeqCompendium_PS00986_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.hap2.bw
color 213,94,0
shortLabel HG03516 Hap2
longLabel HG03516 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00986_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG03516 CpG diff
longLabel HG03516 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 266
track fiberSeqCompendium_PS00986_cpgDiff_l0
parent fiberSeqCompendium_PS00986_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_all.bw
color 137,143,143
shortLabel HG03516 All
longLabel HG03516 CpG haplotype difference, All
track fiberSeqCompendium_PS00986_cpgDiff_l1
parent fiberSeqCompendium_PS00986_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG03516 p < 0.01
longLabel HG03516 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00986_cpgDiff_l2
parent fiberSeqCompendium_PS00986_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG03516 p < 0.001
longLabel HG03516 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00986_cpgDiff_l3
parent fiberSeqCompendium_PS00986_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00986/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG03516 p < 0.0001
longLabel HG03516 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00987_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/all.percent.accessible.bw
shortLabel HG03804 Acc
longLabel HG03804 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 271
track fiberSeqCompendium_PS00987_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/fire-peaks.ucsc.bb
shortLabel HG03804 Peaks
longLabel HG03804 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG03804 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 272
track fiberSeqCompendium_PS00987_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG03804 Hap1/2
longLabel HG03804 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 273
track fiberSeqCompendium_PS00987_hap_h1
parent fiberSeqCompendium_PS00987_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG03804 Hap1
longLabel HG03804 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00987_hap_h2
parent fiberSeqCompendium_PS00987_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG03804 Hap2
longLabel HG03804 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00987_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.combined.bw
shortLabel HG03804 CpG
longLabel HG03804 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 274
track fiberSeqCompendium_PS00987_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG03804 CpG Hap1/2
longLabel HG03804 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 275
track fiberSeqCompendium_PS00987_cpgHap_h1
parent fiberSeqCompendium_PS00987_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap1.bw
color 0,114,178
shortLabel HG03804 Hap1
longLabel HG03804 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00987_cpgHap_h2
parent fiberSeqCompendium_PS00987_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.hap2.bw
color 213,94,0
shortLabel HG03804 Hap2
longLabel HG03804 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00987_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG03804 CpG diff
longLabel HG03804 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 276
track fiberSeqCompendium_PS00987_cpgDiff_l0
parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_all.bw
color 137,143,143
shortLabel HG03804 All
longLabel HG03804 CpG haplotype difference, All
track fiberSeqCompendium_PS00987_cpgDiff_l1
parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG03804 p < 0.01
longLabel HG03804 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00987_cpgDiff_l2
parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG03804 p < 0.001
longLabel HG03804 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00987_cpgDiff_l3
parent fiberSeqCompendium_PS00987_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00987/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG03804 p < 0.0001
longLabel HG03804 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00988_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/all.percent.accessible.bw
shortLabel HG03942 Acc
longLabel HG03942 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 281
track fiberSeqCompendium_PS00988_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/fire-peaks.ucsc.bb
shortLabel HG03942 Peaks
longLabel HG03942 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG03942 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 282
track fiberSeqCompendium_PS00988_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG03942 Hap1/2
longLabel HG03942 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 283
track fiberSeqCompendium_PS00988_hap_h1
parent fiberSeqCompendium_PS00988_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG03942 Hap1
longLabel HG03942 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00988_hap_h2
parent fiberSeqCompendium_PS00988_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG03942 Hap2
longLabel HG03942 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00988_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.combined.bw
shortLabel HG03942 CpG
longLabel HG03942 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 284
track fiberSeqCompendium_PS00988_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG03942 CpG Hap1/2
longLabel HG03942 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 285
track fiberSeqCompendium_PS00988_cpgHap_h1
parent fiberSeqCompendium_PS00988_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.hap1.bw
color 0,114,178
shortLabel HG03942 Hap1
longLabel HG03942 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00988_cpgHap_h2
parent fiberSeqCompendium_PS00988_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.hap2.bw
color 213,94,0
shortLabel HG03942 Hap2
longLabel HG03942 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00988_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG03942 CpG diff
longLabel HG03942 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 286
track fiberSeqCompendium_PS00988_cpgDiff_l0
parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_all.bw
color 137,143,143
shortLabel HG03942 All
longLabel HG03942 CpG haplotype difference, All
track fiberSeqCompendium_PS00988_cpgDiff_l1
parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG03942 p < 0.01
longLabel HG03942 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00988_cpgDiff_l2
parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG03942 p < 0.001
longLabel HG03942 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00988_cpgDiff_l3
parent fiberSeqCompendium_PS00988_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00988/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG03942 p < 0.0001
longLabel HG03942 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00989_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/all.percent.accessible.bw
shortLabel HG04160 Acc
longLabel HG04160 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 291
track fiberSeqCompendium_PS00989_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/fire-peaks.ucsc.bb
shortLabel HG04160 Peaks
longLabel HG04160 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG04160 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 292
track fiberSeqCompendium_PS00989_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG04160 Hap1/2
longLabel HG04160 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 293
track fiberSeqCompendium_PS00989_hap_h1
parent fiberSeqCompendium_PS00989_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG04160 Hap1
longLabel HG04160 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00989_hap_h2
parent fiberSeqCompendium_PS00989_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG04160 Hap2
longLabel HG04160 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00989_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.combined.bw
shortLabel HG04160 CpG
longLabel HG04160 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 294
track fiberSeqCompendium_PS00989_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG04160 CpG Hap1/2
longLabel HG04160 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 295
track fiberSeqCompendium_PS00989_cpgHap_h1
parent fiberSeqCompendium_PS00989_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.hap1.bw
color 0,114,178
shortLabel HG04160 Hap1
longLabel HG04160 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00989_cpgHap_h2
parent fiberSeqCompendium_PS00989_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.hap2.bw
color 213,94,0
shortLabel HG04160 Hap2
longLabel HG04160 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00989_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG04160 CpG diff
longLabel HG04160 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 296
track fiberSeqCompendium_PS00989_cpgDiff_l0
parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_all.bw
color 137,143,143
shortLabel HG04160 All
longLabel HG04160 CpG haplotype difference, All
track fiberSeqCompendium_PS00989_cpgDiff_l1
parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG04160 p < 0.01
longLabel HG04160 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00989_cpgDiff_l2
parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG04160 p < 0.001
longLabel HG04160 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00989_cpgDiff_l3
parent fiberSeqCompendium_PS00989_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00989/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG04160 p < 0.0001
longLabel HG04160 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS00990_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/all.percent.accessible.bw
shortLabel HG04187 Acc
longLabel HG04187 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 301
track fiberSeqCompendium_PS00990_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/fire-peaks.ucsc.bb
shortLabel HG04187 Peaks
longLabel HG04187 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HG04187 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 302
track fiberSeqCompendium_PS00990_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HG04187 Hap1/2
longLabel HG04187 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 303
track fiberSeqCompendium_PS00990_hap_h1
parent fiberSeqCompendium_PS00990_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap1.percent.accessible.bw
color 0,114,178
shortLabel HG04187 Hap1
longLabel HG04187 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS00990_hap_h2
parent fiberSeqCompendium_PS00990_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/hap2.percent.accessible.bw
color 213,94,0
shortLabel HG04187 Hap2
longLabel HG04187 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS00990_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.combined.bw
shortLabel HG04187 CpG
longLabel HG04187 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 304
track fiberSeqCompendium_PS00990_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HG04187 CpG Hap1/2
longLabel HG04187 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 305
track fiberSeqCompendium_PS00990_cpgHap_h1
parent fiberSeqCompendium_PS00990_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.hap1.bw
color 0,114,178
shortLabel HG04187 Hap1
longLabel HG04187 CpG methylation, haplotype 1
track fiberSeqCompendium_PS00990_cpgHap_h2
parent fiberSeqCompendium_PS00990_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.hap2.bw
color 213,94,0
shortLabel HG04187 Hap2
longLabel HG04187 CpG methylation, haplotype 2
track fiberSeqCompendium_PS00990_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HG04187 CpG diff
longLabel HG04187 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 306
track fiberSeqCompendium_PS00990_cpgDiff_l0
parent fiberSeqCompendium_PS00990_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_all.bw
color 137,143,143
shortLabel HG04187 All
longLabel HG04187 CpG haplotype difference, All
track fiberSeqCompendium_PS00990_cpgDiff_l1
parent fiberSeqCompendium_PS00990_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HG04187 p < 0.01
longLabel HG04187 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS00990_cpgDiff_l2
parent fiberSeqCompendium_PS00990_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HG04187 p < 0.001
longLabel HG04187 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS00990_cpgDiff_l3
parent fiberSeqCompendium_PS00990_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS00990/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HG04187 p < 0.0001
longLabel HG04187 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01302_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/all.percent.accessible.bw
shortLabel A549 Acc
longLabel A549 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 311
track fiberSeqCompendium_PS01302_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/fire-peaks.ucsc.bb
shortLabel A549 Peaks
longLabel A549 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver A549 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 312
track fiberSeqCompendium_PS01302_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel A549 Hap1/2
longLabel A549 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 313
track fiberSeqCompendium_PS01302_hap_h1
parent fiberSeqCompendium_PS01302_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap1.percent.accessible.bw
color 0,114,178
shortLabel A549 Hap1
longLabel A549 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01302_hap_h2
parent fiberSeqCompendium_PS01302_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/hap2.percent.accessible.bw
color 213,94,0
shortLabel A549 Hap2
longLabel A549 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01302_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.combined.bw
shortLabel A549 CpG
longLabel A549 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 314
track fiberSeqCompendium_PS01302_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel A549 CpG Hap1/2
longLabel A549 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 315
track fiberSeqCompendium_PS01302_cpgHap_h1
parent fiberSeqCompendium_PS01302_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.hap1.bw
color 0,114,178
shortLabel A549 Hap1
longLabel A549 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01302_cpgHap_h2
parent fiberSeqCompendium_PS01302_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.hap2.bw
color 213,94,0
shortLabel A549 Hap2
longLabel A549 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01302_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel A549 CpG diff
longLabel A549 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 316
track fiberSeqCompendium_PS01302_cpgDiff_l0
parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_all.bw
color 137,143,143
shortLabel A549 All
longLabel A549 CpG haplotype difference, All
track fiberSeqCompendium_PS01302_cpgDiff_l1
parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel A549 p < 0.01
longLabel A549 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01302_cpgDiff_l2
parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel A549 p < 0.001
longLabel A549 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01302_cpgDiff_l3
parent fiberSeqCompendium_PS01302_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01302/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel A549 p < 0.0001
longLabel A549 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01305_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/all.percent.accessible.bw
shortLabel MCF-7 Acc
longLabel MCF-7 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 321
track fiberSeqCompendium_PS01305_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/fire-peaks.ucsc.bb
shortLabel MCF-7 Peaks
longLabel MCF-7 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver MCF-7 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 322
track fiberSeqCompendium_PS01305_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel MCF-7 Hap1/2
longLabel MCF-7 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 323
track fiberSeqCompendium_PS01305_hap_h1
parent fiberSeqCompendium_PS01305_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap1.percent.accessible.bw
color 0,114,178
shortLabel MCF-7 Hap1
longLabel MCF-7 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01305_hap_h2
parent fiberSeqCompendium_PS01305_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/hap2.percent.accessible.bw
color 213,94,0
shortLabel MCF-7 Hap2
longLabel MCF-7 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01305_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.combined.bw
shortLabel MCF-7 CpG
longLabel MCF-7 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 324
track fiberSeqCompendium_PS01305_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel MCF-7 CpG Hap1/2
longLabel MCF-7 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 325
track fiberSeqCompendium_PS01305_cpgHap_h1
parent fiberSeqCompendium_PS01305_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.hap1.bw
color 0,114,178
shortLabel MCF-7 Hap1
longLabel MCF-7 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01305_cpgHap_h2
parent fiberSeqCompendium_PS01305_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.hap2.bw
color 213,94,0
shortLabel MCF-7 Hap2
longLabel MCF-7 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01305_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel MCF-7 CpG diff
longLabel MCF-7 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 326
track fiberSeqCompendium_PS01305_cpgDiff_l0
parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_all.bw
color 137,143,143
shortLabel MCF-7 All
longLabel MCF-7 CpG haplotype difference, All
track fiberSeqCompendium_PS01305_cpgDiff_l1
parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel MCF-7 p < 0.01
longLabel MCF-7 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01305_cpgDiff_l2
parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel MCF-7 p < 0.001
longLabel MCF-7 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01305_cpgDiff_l3
parent fiberSeqCompendium_PS01305_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01305/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel MCF-7 p < 0.0001
longLabel MCF-7 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01314_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/all.percent.accessible.bw
shortLabel HCT116 Acc
longLabel HCT116 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 331
track fiberSeqCompendium_PS01314_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/fire-peaks.ucsc.bb
shortLabel HCT116 Peaks
longLabel HCT116 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver HCT116 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 332
track fiberSeqCompendium_PS01314_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel HCT116 Hap1/2
longLabel HCT116 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 333
track fiberSeqCompendium_PS01314_hap_h1
parent fiberSeqCompendium_PS01314_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap1.percent.accessible.bw
color 0,114,178
shortLabel HCT116 Hap1
longLabel HCT116 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01314_hap_h2
parent fiberSeqCompendium_PS01314_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/hap2.percent.accessible.bw
color 213,94,0
shortLabel HCT116 Hap2
longLabel HCT116 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01314_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.combined.bw
shortLabel HCT116 CpG
longLabel HCT116 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 334
track fiberSeqCompendium_PS01314_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel HCT116 CpG Hap1/2
longLabel HCT116 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 335
track fiberSeqCompendium_PS01314_cpgHap_h1
parent fiberSeqCompendium_PS01314_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.hap1.bw
color 0,114,178
shortLabel HCT116 Hap1
longLabel HCT116 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01314_cpgHap_h2
parent fiberSeqCompendium_PS01314_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.hap2.bw
color 213,94,0
shortLabel HCT116 Hap2
longLabel HCT116 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01314_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel HCT116 CpG diff
longLabel HCT116 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 336
track fiberSeqCompendium_PS01314_cpgDiff_l0
parent fiberSeqCompendium_PS01314_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_all.bw
color 137,143,143
shortLabel HCT116 All
longLabel HCT116 CpG haplotype difference, All
track fiberSeqCompendium_PS01314_cpgDiff_l1
parent fiberSeqCompendium_PS01314_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel HCT116 p < 0.01
longLabel HCT116 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01314_cpgDiff_l2
parent fiberSeqCompendium_PS01314_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel HCT116 p < 0.001
longLabel HCT116 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01314_cpgDiff_l3
parent fiberSeqCompendium_PS01314_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01314/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel HCT116 p < 0.0001
longLabel HCT116 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01319_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/all.percent.accessible.bw
shortLabel Caco-2 Acc
longLabel Caco-2 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 341
track fiberSeqCompendium_PS01319_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/fire-peaks.ucsc.bb
shortLabel Caco-2 Peaks
longLabel Caco-2 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver Caco-2 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 342
track fiberSeqCompendium_PS01319_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel Caco-2 Hap1/2
longLabel Caco-2 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 343
track fiberSeqCompendium_PS01319_hap_h1
parent fiberSeqCompendium_PS01319_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap1.percent.accessible.bw
color 0,114,178
shortLabel Caco-2 Hap1
longLabel Caco-2 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01319_hap_h2
parent fiberSeqCompendium_PS01319_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/hap2.percent.accessible.bw
color 213,94,0
shortLabel Caco-2 Hap2
longLabel Caco-2 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01319_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.combined.bw
shortLabel Caco-2 CpG
longLabel Caco-2 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 344
track fiberSeqCompendium_PS01319_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel Caco-2 CpG Hap1/2
longLabel Caco-2 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 345
track fiberSeqCompendium_PS01319_cpgHap_h1
parent fiberSeqCompendium_PS01319_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.hap1.bw
color 0,114,178
shortLabel Caco-2 Hap1
longLabel Caco-2 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01319_cpgHap_h2
parent fiberSeqCompendium_PS01319_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.hap2.bw
color 213,94,0
shortLabel Caco-2 Hap2
longLabel Caco-2 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01319_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel Caco-2 CpG diff
longLabel Caco-2 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 346
track fiberSeqCompendium_PS01319_cpgDiff_l0
parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_all.bw
color 137,143,143
shortLabel Caco-2 All
longLabel Caco-2 CpG haplotype difference, All
track fiberSeqCompendium_PS01319_cpgDiff_l1
parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel Caco-2 p < 0.01
longLabel Caco-2 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01319_cpgDiff_l2
parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel Caco-2 p < 0.001
longLabel Caco-2 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01319_cpgDiff_l3
parent fiberSeqCompendium_PS01319_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01319/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel Caco-2 p < 0.0001
longLabel Caco-2 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01388_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/all.percent.accessible.bw
shortLabel WTC-11 Acc
longLabel WTC-11 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 351
track fiberSeqCompendium_PS01388_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/fire-peaks.ucsc.bb
shortLabel WTC-11 Peaks
longLabel WTC-11 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver WTC-11 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 352
track fiberSeqCompendium_PS01388_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel WTC-11 Hap1/2
longLabel WTC-11 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 353
track fiberSeqCompendium_PS01388_hap_h1
parent fiberSeqCompendium_PS01388_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap1.percent.accessible.bw
color 0,114,178
shortLabel WTC-11 Hap1
longLabel WTC-11 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01388_hap_h2
parent fiberSeqCompendium_PS01388_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/hap2.percent.accessible.bw
color 213,94,0
shortLabel WTC-11 Hap2
longLabel WTC-11 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01388_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.combined.bw
shortLabel WTC-11 CpG
longLabel WTC-11 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 354
track fiberSeqCompendium_PS01388_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel WTC-11 CpG Hap1/2
longLabel WTC-11 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 355
track fiberSeqCompendium_PS01388_cpgHap_h1
parent fiberSeqCompendium_PS01388_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.hap1.bw
color 0,114,178
shortLabel WTC-11 Hap1
longLabel WTC-11 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01388_cpgHap_h2
parent fiberSeqCompendium_PS01388_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.hap2.bw
color 213,94,0
shortLabel WTC-11 Hap2
longLabel WTC-11 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01388_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel WTC-11 CpG diff
longLabel WTC-11 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 356
track fiberSeqCompendium_PS01388_cpgDiff_l0
parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_all.bw
color 137,143,143
shortLabel WTC-11 All
longLabel WTC-11 CpG haplotype difference, All
track fiberSeqCompendium_PS01388_cpgDiff_l1
parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel WTC-11 p < 0.01
longLabel WTC-11 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01388_cpgDiff_l2
parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel WTC-11 p < 0.001
longLabel WTC-11 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01388_cpgDiff_l3
parent fiberSeqCompendium_PS01388_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01388/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel WTC-11 p < 0.0001
longLabel WTC-11 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01517_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/all.percent.accessible.bw
shortLabel GM28572 Acc
longLabel GM28572 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 361
track fiberSeqCompendium_PS01517_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/fire-peaks.ucsc.bb
shortLabel GM28572 Peaks
longLabel GM28572 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM28572 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 362
track fiberSeqCompendium_PS01517_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM28572 Hap1/2
longLabel GM28572 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 363
track fiberSeqCompendium_PS01517_hap_h1
parent fiberSeqCompendium_PS01517_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM28572 Hap1
longLabel GM28572 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01517_hap_h2
parent fiberSeqCompendium_PS01517_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM28572 Hap2
longLabel GM28572 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01517_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.combined.bw
shortLabel GM28572 CpG
longLabel GM28572 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 364
track fiberSeqCompendium_PS01517_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM28572 CpG Hap1/2
longLabel GM28572 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 365
track fiberSeqCompendium_PS01517_cpgHap_h1
parent fiberSeqCompendium_PS01517_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.hap1.bw
color 0,114,178
shortLabel GM28572 Hap1
longLabel GM28572 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01517_cpgHap_h2
parent fiberSeqCompendium_PS01517_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.hap2.bw
color 213,94,0
shortLabel GM28572 Hap2
longLabel GM28572 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01517_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM28572 CpG diff
longLabel GM28572 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 366
track fiberSeqCompendium_PS01517_cpgDiff_l0
parent fiberSeqCompendium_PS01517_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_all.bw
color 137,143,143
shortLabel GM28572 All
longLabel GM28572 CpG haplotype difference, All
track fiberSeqCompendium_PS01517_cpgDiff_l1
parent fiberSeqCompendium_PS01517_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM28572 p < 0.01
longLabel GM28572 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01517_cpgDiff_l2
parent fiberSeqCompendium_PS01517_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM28572 p < 0.001
longLabel GM28572 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01517_cpgDiff_l3
parent fiberSeqCompendium_PS01517_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01517/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM28572 p < 0.0001
longLabel GM28572 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01518_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/all.percent.accessible.bw
shortLabel GM28570 Acc
longLabel GM28570 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 371
track fiberSeqCompendium_PS01518_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/fire-peaks.ucsc.bb
shortLabel GM28570 Peaks
longLabel GM28570 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM28570 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 372
track fiberSeqCompendium_PS01518_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM28570 Hap1/2
longLabel GM28570 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 373
track fiberSeqCompendium_PS01518_hap_h1
parent fiberSeqCompendium_PS01518_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM28570 Hap1
longLabel GM28570 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01518_hap_h2
parent fiberSeqCompendium_PS01518_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM28570 Hap2
longLabel GM28570 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01518_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.combined.bw
shortLabel GM28570 CpG
longLabel GM28570 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 374
track fiberSeqCompendium_PS01518_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM28570 CpG Hap1/2
longLabel GM28570 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 375
track fiberSeqCompendium_PS01518_cpgHap_h1
parent fiberSeqCompendium_PS01518_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.hap1.bw
color 0,114,178
shortLabel GM28570 Hap1
longLabel GM28570 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01518_cpgHap_h2
parent fiberSeqCompendium_PS01518_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.hap2.bw
color 213,94,0
shortLabel GM28570 Hap2
longLabel GM28570 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01518_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM28570 CpG diff
longLabel GM28570 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 376
track fiberSeqCompendium_PS01518_cpgDiff_l0
parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_all.bw
color 137,143,143
shortLabel GM28570 All
longLabel GM28570 CpG haplotype difference, All
track fiberSeqCompendium_PS01518_cpgDiff_l1
parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM28570 p < 0.01
longLabel GM28570 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01518_cpgDiff_l2
parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM28570 p < 0.001
longLabel GM28570 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01518_cpgDiff_l3
parent fiberSeqCompendium_PS01518_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01518/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM28570 p < 0.0001
longLabel GM28570 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01519_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/all.percent.accessible.bw
shortLabel GM25456 Acc
longLabel GM25456 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 381
track fiberSeqCompendium_PS01519_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/fire-peaks.ucsc.bb
shortLabel GM25456 Peaks
longLabel GM25456 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM25456 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 382
track fiberSeqCompendium_PS01519_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM25456 Hap1/2
longLabel GM25456 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 383
track fiberSeqCompendium_PS01519_hap_h1
parent fiberSeqCompendium_PS01519_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM25456 Hap1
longLabel GM25456 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01519_hap_h2
parent fiberSeqCompendium_PS01519_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM25456 Hap2
longLabel GM25456 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01519_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.combined.bw
shortLabel GM25456 CpG
longLabel GM25456 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 384
track fiberSeqCompendium_PS01519_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM25456 CpG Hap1/2
longLabel GM25456 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 385
track fiberSeqCompendium_PS01519_cpgHap_h1
parent fiberSeqCompendium_PS01519_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.hap1.bw
color 0,114,178
shortLabel GM25456 Hap1
longLabel GM25456 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01519_cpgHap_h2
parent fiberSeqCompendium_PS01519_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.hap2.bw
color 213,94,0
shortLabel GM25456 Hap2
longLabel GM25456 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01519_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM25456 CpG diff
longLabel GM25456 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 386
track fiberSeqCompendium_PS01519_cpgDiff_l0
parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_all.bw
color 137,143,143
shortLabel GM25456 All
longLabel GM25456 CpG haplotype difference, All
track fiberSeqCompendium_PS01519_cpgDiff_l1
parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM25456 p < 0.01
longLabel GM25456 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01519_cpgDiff_l2
parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM25456 p < 0.001
longLabel GM25456 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01519_cpgDiff_l3
parent fiberSeqCompendium_PS01519_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01519/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM25456 p < 0.0001
longLabel GM25456 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01520_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/all.percent.accessible.bw
shortLabel GM25455 Acc
longLabel GM25455 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 391
track fiberSeqCompendium_PS01520_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/fire-peaks.ucsc.bb
shortLabel GM25455 Peaks
longLabel GM25455 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM25455 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 392
track fiberSeqCompendium_PS01520_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM25455 Hap1/2
longLabel GM25455 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 393
track fiberSeqCompendium_PS01520_hap_h1
parent fiberSeqCompendium_PS01520_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM25455 Hap1
longLabel GM25455 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01520_hap_h2
parent fiberSeqCompendium_PS01520_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM25455 Hap2
longLabel GM25455 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01520_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.combined.bw
shortLabel GM25455 CpG
longLabel GM25455 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 394
track fiberSeqCompendium_PS01520_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM25455 CpG Hap1/2
longLabel GM25455 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 395
track fiberSeqCompendium_PS01520_cpgHap_h1
parent fiberSeqCompendium_PS01520_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.hap1.bw
color 0,114,178
shortLabel GM25455 Hap1
longLabel GM25455 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01520_cpgHap_h2
parent fiberSeqCompendium_PS01520_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.hap2.bw
color 213,94,0
shortLabel GM25455 Hap2
longLabel GM25455 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01520_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM25455 CpG diff
longLabel GM25455 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 396
track fiberSeqCompendium_PS01520_cpgDiff_l0
parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_all.bw
color 137,143,143
shortLabel GM25455 All
longLabel GM25455 CpG haplotype difference, All
track fiberSeqCompendium_PS01520_cpgDiff_l1
parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM25455 p < 0.01
longLabel GM25455 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01520_cpgDiff_l2
parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM25455 p < 0.001
longLabel GM25455 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01520_cpgDiff_l3
parent fiberSeqCompendium_PS01520_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01520/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM25455 p < 0.0001
longLabel GM25455 CpG haplotype difference, p < 0.0001
track fiberSeqCompendium_PS01524_acc
parent fiberSeqCompendium off
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/all.percent.accessible.bw
shortLabel GM27730 Acc
longLabel GM27730 Fiber-seq percent accessible, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
alwaysZero on
graphTypeDefault bar
windowingFunction maximum
maxHeightPixels 100:40:8
onlyVisibility full
priority 401
track fiberSeqCompendium_PS01524_peaks
parent fiberSeqCompendium off
type bigNarrowPeak
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/fire-peaks.ucsc.bb
shortLabel GM27730 Peaks
longLabel GM27730 Fiber-seq FIRE peaks
signalFilter 0
signalFilterLimits 0:100
qValueFilter 0
qValueFilterLimits 0:100
scoreFilter 0
scoreFilterLimits 0:1000
mouseOver GM27730 FIRE peak
FIRE score: ${signalValue}
-log10 FDR: ${qValue}
Score: ${score}
onlyVisibility dense
priority 402
track fiberSeqCompendium_PS01524_hap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction maximum
maxHeightPixels 100:40:8
shortLabel GM27730 Hap1/2
longLabel GM27730 Fiber-seq percent accessible, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 403
track fiberSeqCompendium_PS01524_hap_h1
parent fiberSeqCompendium_PS01524_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap1.percent.accessible.bw
color 0,114,178
shortLabel GM27730 Hap1
longLabel GM27730 Fiber-seq percent accessible, haplotype 1
track fiberSeqCompendium_PS01524_hap_h2
parent fiberSeqCompendium_PS01524_hap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/hap2.percent.accessible.bw
color 213,94,0
shortLabel GM27730 Hap2
longLabel GM27730 Fiber-seq percent accessible, haplotype 2
track fiberSeqCompendium_PS01524_cpg
parent fiberSeqCompendium off
type bigWig 0 100
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.combined.bw
shortLabel GM27730 CpG
longLabel GM27730 CpG methylation, both haplotypes
color 0,0,0
viewLimits 0:100
autoScale off
windowingFunction mean
maxHeightPixels 100:40:8
onlyVisibility full
priority 404
track fiberSeqCompendium_PS01524_cpgHap
parent fiberSeqCompendium off
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 100
viewLimits 0:100
autoScale off
alwaysZero on
windowingFunction mean
maxHeightPixels 100:40:8
shortLabel GM27730 CpG Hap1/2
longLabel GM27730 CpG methylation, haplotype 1 (blue) and 2 (orange)
onlyVisibility full
priority 405
track fiberSeqCompendium_PS01524_cpgHap_h1
parent fiberSeqCompendium_PS01524_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.hap1.bw
color 0,114,178
shortLabel GM27730 Hap1
longLabel GM27730 CpG methylation, haplotype 1
track fiberSeqCompendium_PS01524_cpgHap_h2
parent fiberSeqCompendium_PS01524_cpgHap
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.hap2.bw
color 213,94,0
shortLabel GM27730 Hap2
longLabel GM27730 CpG methylation, haplotype 2
track fiberSeqCompendium_PS01524_cpgDiff
parent fiberSeqCompendium off
container multiWig
aggregate solidOverlay
showSubtrackColorOnUi on
type bigWig -100 100
viewLimits -100:100
autoScale off
windowingFunction mean
maxHeightPixels 100:50:8
shortLabel GM27730 CpG diff
longLabel GM27730 CpG methylation difference between haplotypes, by significance threshold
onlyVisibility full
priority 406
track fiberSeqCompendium_PS01524_cpgDiff_l0
parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_all.bw
color 137,143,143
shortLabel GM27730 All
longLabel GM27730 CpG haplotype difference, All
track fiberSeqCompendium_PS01524_cpgDiff_l1
parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.01.bw
color 235,229,52
shortLabel GM27730 p < 0.01
longLabel GM27730 CpG haplotype difference, p < 0.01
track fiberSeqCompendium_PS01524_cpgDiff_l2
parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.001.bw
color 245,148,22
shortLabel GM27730 p < 0.001
longLabel GM27730 CpG haplotype difference, p < 0.001
track fiberSeqCompendium_PS01524_cpgDiff_l3
parent fiberSeqCompendium_PS01524_cpgDiff
type bigWig
bigDataUrl /gbdb/hg38/fiberSeq/PS01524/cpg.diffs_p0.0001.bw
color 255,0,0
shortLabel GM27730 p < 0.0001
longLabel GM27730 CpG haplotype difference, p < 0.0001