c6235f265d85c7ab55dd84b2e2d773604e3ac2ec max Tue Jun 17 02:21:00 2025 -0700 fixing incorrect bigbed sizes, refs #35703 diff --git src/hg/makeDb/trackDb/human/hg38/unusualcons.ra src/hg/makeDb/trackDb/human/hg38/unusualcons.ra index 857ad497436..2e237e29f5c 100644 --- src/hg/makeDb/trackDb/human/hg38/unusualcons.ra +++ src/hg/makeDb/trackDb/human/hg38/unusualcons.ra @@ -1,93 +1,93 @@ track unusualcons compositeTrack on shortLabel Unusually Conserved longLabel Unusually Conserved Regions - Ultracons, HARs, etc. type bed group compGeno track ultras shortLabel Ultracons longLabel Ultracons: 481 Ultraconserved regions - 100% identical in human, mouse and rat, > 200bp parent unusualcons on type bigBed 4 bigDataUrl /gbdb/hg38/unusualcons/hg38.ultraConserved.bb track ucneClusters shortLabel UCNE Clusters longLabel UCNEBase: 239 Cluster of UCNE elements parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/clusters.bb url https://epd.expasy.org/ucnebase/view.php?data=cluster&entry=$$ track ucneChicken shortLabel UCNE Chicken longLabel UCNEBase: 4351 Chicken-conserved elements parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/chicken.bb url https://epd.expasy.org/ucnebase/view.php?data=ucne&entry=$$ track ucneParalogs shortLabel UCNE Paralogs longLabel UCNEBase: 987 Paralogous elements parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/paralogs.bb url url="https://epd.expasy.org/ucnebase/view.php?data=ucne&entry=$$" track ultraZoo shortLabel UltraZoos longLabel UltraZoos: 4552 Ultraconserved regions in Zoonomia alignment - 100% identical in 235 species, >20bp parent unusualcons on - type bigBed 4 + + type bigBed 3 bigDataUrl /gbdb/hg38/unusualcons/zooUCEs.bigBed track har2649 shortLabel HARs longLabel HARs: 2649 Human Accelerated Regions (HARs) merged from various publications by the Pollard Lab parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/nchaes_merged_hg38.bb track hars312 shortLabel ZooHARs longLabel ZooHARs: 312 Human Accelerated Regions (HARs) from Zoonomia alignments parent unusualcons on type bigBed 4 bigDataUrl /gbdb/hg38/unusualcons/KeoughTableS1.bb track haqers shortLabel HAQERS longLabel HAQERS: 1580 Human Ancestor Quickly Evolved Regions parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/haqers.bb track hcondels shortLabel Long hConDels longLabel long hConDels: 583 Long Human Conserved Deletions - present in chimp and macaque but deleted in humans parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/hcondels583.bb track shorthcondels shortLabel Short hConDels longLabel short hConDels: 10032 Short Human hCondels - Human Conserved Deletions < 40bp parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/hcondels.bb track zooRoccs shortLabel ZooRoCCs longLabel Zoonomia RoCCs: Runs of contiguous phyloP constraint parent unusualcons on type bigBed 4 + bigDataUrl /gbdb/hg38/unusualcons/RoCCs.bigBed track zooUnicorns shortLabel ZooUNICORNs longLabel Zoonomia UNICORNs: Unannotated Intergenic Constrained Regions parent unusualcons on - type bigBed 4 + + type bigBed 3 + bigDataUrl /gbdb/hg38/unusualcons/UNICORNs.bigBed