bbabbd5d2566d47d923d51dbe350634783455999
mspeir
  Sun Oct 26 12:14:52 2025 -0700
change soe to gi, refs #35031

diff --git src/hg/htdocs/FAQ/FAQlink.html src/hg/htdocs/FAQ/FAQlink.html
index 1ca48ee863e..b99806bebe3 100755
--- src/hg/htdocs/FAQ/FAQlink.html
+++ src/hg/htdocs/FAQ/FAQlink.html
@@ -326,31 +326,31 @@
 
 <a name="hubUrl"></a>
 <h3>Loading Track Hubs and Assembly Hubs with the URL</h3>
 <h6>How do I create a link to my track hub or assembly hub?</h6>
 <p>Similar to custom tracks, track hubs can be loaded into the URL using the 
 <code>hubUrl=</code> parameter. This parameter takes input similar to the
 <a href="../cgi-bin/hgHubConnect#unlistedHubs">track hub input box</a>. The following example
 links to the hg19 genome database and an example track Hub:</p>  
 <pre><a href=../cgi-bin/hgTracks?db=hg19&hubUrl=https://genome.ucsc.edu/goldenPath/help/examples/hubDirectory/hub.txt>http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=https://genome.ucsc.edu/goldenPath/help/examples/hubDirectory/hub.txt</a></pre>
 
 <p>Track hubs' track visibility can also be changed from the URL parameters. The following link 
 specifies the genome database (db=hg19), loads a track hub (hubUrl=http.../hub.txt), hides all tracks
 (hideTracks=1), hides the subtrack kids of a particular track (gtexRnaSignalMaleYoung_hideKids=1),
 sets a specific subtrack to be displayed (gtexRnaSignalSRR1311243=full), and ignores user settings
 (ignoreCookie=1).</p>
-<pre><a href="../cgi-bin/hgTracks?db=hg19&hubUrl=http://hgdownload.soe.ucsc.edu/hubs/gtex/hub.txt&hideTracks=1&gtexRnaSignalMaleYoung_hideKids=1&gtexRnaSignalMaleYoung=full&gtexRnaSignalSRR1311243=full&ignoreCookie=1">https://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://hgdownload.soe.ucsc.edu/hubs/gtex/hub.txt&hideTracks=1&amp;gtexRnaSignalMaleYoung_hideKids=1&amp;gtexRnaSignalMaleYoung=full&amp;gtexRnaSignalSRR1311243=full&ignoreCookie=1</a></pre>
+<pre><a href="../cgi-bin/hgTracks?db=hg19&hubUrl=http://hgdownload.gi.ucsc.edu/hubs/gtex/hub.txt&hideTracks=1&gtexRnaSignalMaleYoung_hideKids=1&gtexRnaSignalMaleYoung=full&gtexRnaSignalSRR1311243=full&ignoreCookie=1">https://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://hgdownload.gi.ucsc.edu/hubs/gtex/hub.txt&hideTracks=1&amp;gtexRnaSignalMaleYoung_hideKids=1&amp;gtexRnaSignalMaleYoung=full&amp;gtexRnaSignalSRR1311243=full&ignoreCookie=1</a></pre>
 
 <p>
 To link to an assembly hub and display data on a non-natively supported genome, the same 
 parameters apply. To specify the intended genome assembly, instead of using <code>db=</code>,
 you must use <code>genome=araTha1</code>, where araTha1 is the assembly name set by
 your genomes.txt file in the line <code>genome araTha1</code>.</p>
 <pre><a href=../cgi-bin/hgTracks?genome=araTha1&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubAssembly/plantAraTha1/hub.txt>https://genome.ucsc.edu/cgi-bin/hgTracks?genome=araTha1&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubAssembly/plantAraTha1/hub.txt</a></pre>
 <p>
 To see the files behind that assembly hub, please visit the
 <a href="../goldenPath/help/examples/hubExamples/hubAssembly/plantAraTha1/">
 hub's directory</a>. For more information on assembly hubs in general, please see the
 <a href="../goldenPath/help/assemblyHubHelp.html" target ="_blank">assembly hub user guide</a>, the <a
 href="../goldenPath/help/hgTrackHubHelp.html">track hub user guide</a>,
 or the <a href=../goldenPath/help/hubQuickStartAssembly.html>quick start guide
 to assembly hubs</a>.
@@ -430,35 +430,35 @@
 Simply load the track hub on the Genome Browser, and the assembly hub will automatically appear. For
 example, the following <a href="https://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGenArkExample/genArkTrackHub/hub.txt"
 target="_blank">example track hub</a> will load an additional track for the pig (GCA_002844635.1)
 GenArk assembly.
 </p>
 <p>
 To create a link to the track hub that references a GenArk assembly, the
 <code>genome=GCA_002844635.1</code> and <code>hubUrl=</code> URL parameters can be used like in the
 following example:
 </p>
 <pre>
 <a href="/cgi-bin/hgTracks?genome=GCA_002844635.1&hubUrl=https://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGenArkExample/genArkTrackHub/hub.txt" target="_blank">https://genome.ucsc.edu/cgi-bin/hgTracks?genome=GCA_002844635.1&hubUrl=https://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGenArkExample/genArkTrackHub/hub.txt</a>
 </pre>
 <p>
 You can also read a blog post,
-<a href="https://genome-blog.soe.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls"
+<a href="https://genome-blog.gi.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls"
 target="_blank">Sharing Data with Sessions and URLs</a>, about how to
-<a href="https://genome-blog.soe.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls/#assemblyHubs"
+<a href="https://genome-blog.gi.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls/#assemblyHubs"
 target="_blank">build URLs to track hubs on assembly hubs</a> or see further examples of
-<a href="https://genome-blog.soe.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls/#GenArk"
+<a href="https://genome-blog.gi.ucsc.edu/blog/2021/08/13/sharing-data-with-sessions-and-urls/#GenArk"
 target="_blank">GenArk hubs</a> loaded with custom data.</p>
 
 <a name="genes"></a>
 <a name="link3"></a>
 <h2>Linking to gene-specific information</h2>
 <h6>How do I link to a specific gene or specific gene description page?</h6>
 <p>
 To jump directly to a gene's position on the Genome Browser, set the position parameter in the
 URL to a gene symbol (e.g., TP53, MTOR, KRAS) and add the parameter
 <code>singleSearch=knownCanonical</code>. For example, the following link will open the
 Genome Browser for the hg19 human assembly at the position of TP53 on the knownCanonical dataset
 </p>
 <p><code><a href="../cgi-bin/hgTracks?db=hg19&singleSearch=knownCanonical&position=TP53" target="_blank">http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&singleSearch=knownCanonical&position=TP53</a></code></p>
 <p>
 <a name="gene"></a>