bbabbd5d2566d47d923d51dbe350634783455999 mspeir Sun Oct 26 12:14:52 2025 -0700 change soe to gi, refs #35031 diff --git src/hg/htdocs/goldenPath/help/trix.html src/hg/htdocs/goldenPath/help/trix.html index 4c91a42ac6e..94a1ef59142 100755 --- src/hg/htdocs/goldenPath/help/trix.html +++ src/hg/htdocs/goldenPath/help/trix.html @@ -5,31 +5,31 @@ <!-- Relative paths to support mirror sites with non-standard GB docs install --> <!--#include virtual="$ROOT/inc/gbPageStart.html" --> <h1>Trix Indices</h1> <p> A Trix index consists of a pair of files that allow for fast look-up of free text associated with a list of identifiers. The index is created from a single line-oriented text file using the program <code>ixIxx</code>. Each line in the text file starts with an identifier, followed by free text associated with the ID. The search is not case sensitive, so any case-combination of the free text entered will be matched. For a more complete description of how to make a searchable track hub (or custom track), please visit the <a href="hubQuickStartSearch.html" target="_blank">Quick Start Guide to Searchable track hubs</a>.</p> <p> To complete the steps below you must first download the <code>ixIxx</code> utility. For more information on downloading our command line utilities, see these -<a href="http://hgdownload.soe.ucsc.edu/downloads.html#source_downloads">instructions</a>.</p> +<a href="http://hgdownload.gi.ucsc.edu/downloads.html#source_downloads">instructions</a>.</p> <h3 id="ex1">Example 1</h3> <p> To create a Trix index, follow these steps: <ol> <li> Prepare a text file that associates your IDs with free text:<br> <pre><code> id1 this is text for id1 id2 this is text for id2 id3 this is text for id3</code></pre></li> <li> Run the <code>ixIxx</code> program on your text file.<br> <pre><code> ixIxx input.txt myTrix.ix myTrix.ixx</code></pre></li> </ol> <h3 id="ex2">Example 2</h3> <ol>