bbabbd5d2566d47d923d51dbe350634783455999 mspeir Sun Oct 26 12:14:52 2025 -0700 change soe to gi, refs #35031 diff --git src/hg/htdocs/goldenPath/mapPlots/RHguide.html src/hg/htdocs/goldenPath/mapPlots/RHguide.html index 3c359d7a732..d25f2a00b37 100644 --- src/hg/htdocs/goldenPath/mapPlots/RHguide.html +++ src/hg/htdocs/goldenPath/mapPlots/RHguide.html @@ -24,31 +24,31 @@ <div class="blockbg"> <div class="blockcontent"> <div class="content"> <ul class="nice-menu nice-menu-down sf-js-enabled" id="nice-menu-1"> <li class="first even" id="home"><a href="../../index.html" ><span id="home-link">Home</span></a></li> <li class="menuparent" id="tools1"><a href="../../cgi-bin/hgGateway">Genomes</a> <ul style="display: none; visibility: hidden;"> <li class="first"><a href="../../cgi-bin/hgTracks?db=hg38&position=lastDbPos">Human GRCh38/hg38</a></li> <li><a href="../../cgi-bin/hgTracks?db=hg19&position=lastDbPos">Human GRCh37/hg19</a></li> <li><a href="../../cgi-bin/hgTracks?db=hub_3671779_hs1&position=lastDbPos">Human T2T-CHM13/hs1</a></li> <li><a href="../../cgi-bin/hgTracks?db=mm39&position=lastDbPos">Mouse GRCm39/mm39</a></li> <li><a href="../../cgi-bin/hgTracks?db=mm10&position=lastDbPos">Mouse GRCm38/mm10</a></li> - <li><a title="Browse thousands of additional assemblies in our Genome Archive" href="https://hgdownload.soe.ucsc.edu/hubs/">Genome Archive GenArk</a></li> + <li><a title="Browse thousands of additional assemblies in our Genome Archive" href="https://hgdownload.gi.ucsc.edu/hubs/">Genome Archive GenArk</a></li> <li class="last"><a href="../../cgi-bin/hgGateway">Other</a></li> </ul> </li> <li class="menuparent" id="tools2"><a href="../../cgi-bin/hgTracks">Genome Browser</a> <ul style="display: none; visibility: hidden;"> <li id="backToBrowserLi" class="first"><a id="backToGenomeBrowser" href="../../cgi-bin/hgTracks">Back to Genome Browser</a></li> <li><a id="configureMenuLink" title="Configure track display or change the Genome Browser font and other display settings" href="../../cgi-bin/hgTracks?hgTracksConfigPage=configure">Configure</a></li> <li><a id="trackSearchMenuLink" title="Search from all available tracks in the current genome" href="../../cgi-bin/hgTracks?hgt_tSearch=track+search">Track Search</a></li> <li><a id="shortMatchLink" title="Find short DNA sequences" href="../../cgi-bin/hgTrackUi?g=oligoMatch&oligoMatch=pack">Short Exact DNA Match</a></li> <!-- OPTIONAL_RECOMMENDED_TRACK_SETS_MENU --> <!-- OPTIONAL_EXPORTED_TRACK_DATA_HUBS_MENU --> <li><a id="cartResetMenuLink" title="Reset user settings; Note: this removes customs tracks and track hubs" href="../../cgi-bin/cartReset?skipLs=1">Reset All User Settings</a></li> </ul> </li> @@ -64,34 +64,34 @@ <li><a id="diMenuLink" title="Intersect the data from several tracks" href="../../cgi-bin/hgIntegrator">Data Integrator</a></li> <li><a title="Explore gene/protein interactions and pathways" id="interactionMenuLink" href="../../cgi-bin/hgGeneGraph">Gene Interactions</a></li> <li class="last"><a title="See our other tools and external tools for working with Genome Browser data" href="../../util.html">Other Tools</a></li> </ul> </li> <li class="menuparent" id="mirrors"><span>Mirrors</span> <ul style="display: none; visibility: hidden;"> <li class="first"><a title="A Genome Browser mirror hosted closer to your location may improve speed" href="../../mirror.html">Euro/Asia Mirrors</a></li> <li><a href="../../goldenPath/help/mirror.html">Mirroring Instructions</a></li> <!-- OPTIONAL_MIRROR_MENU --> </ul> </li> <li class="menuparent" id="downloads"><span>Downloads</span> <ul style="display: none; visibility: hidden;"> - <li class="first"><a title="Download underlying Genome Browser data files" href="https://hgdownload.soe.ucsc.edu/downloads.html">Genome Data</a></li> - <li><a href="https://hgdownload.soe.ucsc.edu/downloads.html#source_downloads">Source Code</a></li> + <li class="first"><a title="Download underlying Genome Browser data files" href="https://hgdownload.gi.ucsc.edu/downloads.html">Genome Data</a></li> + <li><a href="https://hgdownload.gi.ucsc.edu/downloads.html#source_downloads">Source Code</a></li> <li><a title="Purchase a commercial license for certain Genome Browser software" href="https://genome-store.ucsc.edu">Genome Browser Store</a></li> - <li><a title="Download utilities for working with Genome Browser data" href="https://hgdownload.soe.ucsc.edu/downloads.html#utilities_downloads">Utilities</a></li> + <li><a title="Download utilities for working with Genome Browser data" href="https://hgdownload.gi.ucsc.edu/downloads.html#utilities_downloads">Utilities</a></li> <li class="last"><a href="../../goldenPath/help/ftp.html">FTP</a></li> <li class="last"><a href="../../goldenPath/help/mysql.html">MySQL Access</a></li> <li class="last"><a href="../../goldenPath/help/cloud.html">Cloud Access</a></li> <li class="last"><a href="../../goldenPath/help/api.html">REST API</a></li> </ul> </li> <li class="menuparent" id="myData"><span>My Data</span> <ul style="display: none; visibility: hidden;"> <li><a id="customTracksMenuLink" title="Manage your custom tracks" href="../../cgi-bin/hgCustom">Custom Tracks</a></li> <li><a id="sessionsMenuLink" title="Create, manage, and share snapshots of Genome Browser configurations" href="../../cgi-bin/hgSession?hgS_doMainPage=1">My Sessions</a></li> <li><a id="trackHubsMenuLink" title="Connect and manage your own track hubs or browse public hubs" href="../../cgi-bin/hgHubConnect">Track Hubs</a></li> <li><a id="customCompositeMenuLink" title="Build your own collection of tracks on the fly" href="../../cgi-bin/hgCollection">Track Collection Builder</a></li> <li class="last"><a id="publicSessionsMenuLink" title="See how others are using the Genome Browser" href="../../cgi-bin/hgPublicSessions">Public Sessions</a></li> </ul> </li>