bbabbd5d2566d47d923d51dbe350634783455999
mspeir
  Sun Oct 26 12:14:52 2025 -0700
change soe to gi, refs #35031

diff --git src/hg/htdocs/util.html src/hg/htdocs/util.html
index c9bdc7b76f6..d9760bd19ef 100755
--- src/hg/htdocs/util.html
+++ src/hg/htdocs/util.html
@@ -7,31 +7,31 @@
 
 <h1>Other Tools from the UCSC Genome Browser</h1>
 <p>
 The UCSC Genome Browser team develops and updates the following main tools:
 the <a href="../cgi-bin/hgTracks">Genome Browser</a>,
 <a href="../cgi-bin/hgBlat">BLAT</a>, <a href="../cgi-bin/hgPcr">In-Silico PCR</a>, 
 <a href="../cgi-bin/hgTables">Table Browser</a>, and <a href="../cgi-bin/hgLiftOver">LiftOver</a>.
 We maintain the following less-used tools: <a href="../cgi-bin/hgNear">Gene Sorter</a>,
 <a href="../cgi-bin/hgGenome">Genome Graphs</a>, and
 <a href="../cgi-bin/hgIntegrator">Data Integrator</a>.
 These are available from the &quot;Tools&quot; dropdown menu at the top of the site.</p>
 
 <p>
 We also offer command-line utilities for many file conversions and basic bioinformatics functions.
 You can learn more and download these utilities through the 
-<a href="https://hgdownload.soe.ucsc.edu/downloads.html#utilities_downloads">utilities section</a>
+<a href="https://hgdownload.gi.ucsc.edu/downloads.html#utilities_downloads">utilities section</a>
 of our downloads page.</p>
 
 <p>
 The following tools and utilities created by the UCSC Genome Browser Group are also available 
 for public use:</p>
 <ul>
    <li>
    <strong><a href="../cgi-bin/hgGenome">Genome Graphs</a></strong> -
    Allows for the display of any number of annotations as genome-wide density graphs. Useful
    for exploratory data analysis, publication images, and specific data such as linkage studies.</li>
    <li>
    <strong><a href="../cgi-bin/hgNear">Gene Sorter</a></strong> -
    Displays a sorted table of genes that are related to one another. The relationship can be one 
    of several types, including protein-level homology, similarity of gene expression profiles, 
    or genomic proximity.</li>
@@ -49,31 +49,31 @@
    displays high-quality images of in-situ mouse and frogs with gene mRNA hybridization 
    probes and transcription factors.</li>
    <li>
   <strong><a href="http://users.soe.ucsc.edu/~kent/dnaDust/dnadust.html">DNA Duster</a></strong> - 
   removes formatting characters and other non-sequence-related characters from an input sequence. 
   Offers several configuration options for the output format, including translated protein.</li>
   <li>
   <strong><a href="http://users.soe.ucsc.edu/~kent/protDust/protDust.html">Protein 
   Duster</a></strong> -  removes formatting characters and other non-sequence-related characters 
   from an input sequence. Offers several configuration options for the output format.</li>
   <li>
   <strong><a href="cgi-bin/phyloPng">Phylogenetic Tree PNG Maker</a></strong> - creates a PNG image 
   from phylogenetic tree specification given; several configuration options for branch 
   lengths, normalized lengths, branch labels, legend, etc.</li>
   <li>
-  <strong><a href="http://hgdownload.soe.ucsc.edu/downloads.html#source_downloads">Executable and 
+  <strong><a href="http://hgdownload.gi.ucsc.edu/downloads.html#source_downloads">Executable and 
   Source Code Downloads</a></strong> - executable and source code downloads of the Genome Browser, 
   Blat and liftOver.</li>
 </ul>
 </p>
 <p>
 The following tools and utilities created by outside groups may be helpful when working with our
 file formats and the genome annotation databases that we provide. References to these tools are
 provided for the benefit of our users. We are unable to support the use of externally developed
 tools; if you have questions or problems, please contact the developers of the tool directly.
 <ul>
   <li><strong><a href="https://bedops.readthedocs.io/en/latest/">BEDOPS</a></strong> -
       A highly scalable and easily-parallelizable genome analysis toolkit
   </li>
   <li><strong><a href="https://bedtools.readthedocs.io/en/latest/">bedtools</a></strong> -
       A swiss-army knife of tools for a wide-range of genomics analysis tasks