b8c48272f7658078ce2e082c53ccd85cf6bade50 mspeir Mon Jan 19 09:17:04 2026 -0800 swapping human genark genome out for a random virus diff --git src/hg/hubApi/tests/makefile src/hg/hubApi/tests/makefile index dd60ac2ddc7..4c79d9b8b98 100644 --- src/hg/hubApi/tests/makefile +++ src/hg/hubApi/tests/makefile @@ -224,34 +224,34 @@ @./jsonConsumer.pl -serverName="${SERVERNAME}" -endpoint="/list/tracks" -genome="mpxvRivers" -trackLeavesOnly 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing /list/chromosomes?genome=hs1 - a 'curated' assembly list21: setOutput @printf "### $@ '${SERVERNAME}/list/chromosomes?genome=hs1'\n" @./jsonConsumer.pl -serverName="${SERVERNAME}" -endpoint="/list/chromosomes" -genome="hs1" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing /list/files?genome=ce2 #list22: setOutput # @printf "### $@ '${SERVERNAME}/list/files?genome=ce2'\n" # @./jsonConsumer.pl -serverName="${SERVERNAME}" -endpoint="/list/files" -genome="ce2" 2>&1 | egrep -v "${excludeLines}" | egrep -v "dateTime" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz # @zdiff expected/$@.gz testOutput/$@.gz -# testing /list/files?genome=GCA_021951015.1 +# testing /list/files?genome=GCF_018594675.1 list23: setOutput - @printf "### $@ '${SERVERNAME}/list/files?genome=GCA_021951015.1'\n" - @./jsonConsumer.pl -serverName="${SERVERNAME}" -endpoint="/list/files" -genome="GCA_021951015.1" 2>&1 | egrep -v "${excludeLines}" | egrep -v "dateTime" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz + @printf "### $@ '${SERVERNAME}/list/files?genome=GCF_018594675.1'\n" + @./jsonConsumer.pl -serverName="${SERVERNAME}" -endpoint="/list/files" -genome="GCF_018594675.1" 2>&1 | egrep -v "${excludeLines}" | egrep -v "dateTime" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing /list/files?genome=ce2;maxItemsOutput=5 list24: setOutput @printf "### $@ '${SERVERNAME}/list/files?genome=ce2;maxItemsOutput=5'\n" @./jsonConsumer.pl -maxItemsOutput=5 -serverName="${SERVERNAME}" -endpoint="/list/files" -genome="ce2" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing /list/files?genome=ce2;maxItemsOutput=5;format=text list25: setOutput @printf "### $@ '${SERVERNAME}/list/files?genome=ce2;maxItemsOutput=5;format=text'\n" @ curl -L "${SERVERNAME}/list/files?genome=ce2;maxItemsOutput=5;format=text" 2> /dev/null | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#; s#/hubs/.*/hub#/hubs/hub#;' | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing /list/genarkGenomes