--------------------------------------------------------------- mm8.trackDb.html : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 9565c9565 < mgcFullMrna | This track show alignments of mouse mRNAs from the --- > mgcFullMrna | This track shows alignments of mouse mRNAs from the 9570c9570 < mgcFullMrna | clones for human, mouse, rat, xenopus, and zerbrafish genes. --- > mgcFullMrna | clones for human, mouse, and rat genes. 13980,13992d13979 < rmsk | < rmsk |
< rmsk | When analyzing the data tables of this track, keep in mind that Repbase is not the same < rmsk | as the Repeatmasker sequence database and that the repeat names in the < rmsk | Repeatmasker output are not the same as the sequence names in the Repeatmasker < rmsk | database. Concretely, you can find a name such as "L1PA4" in the Repeatmasker < rmsk | output and this track, but there is not necessarily a single sequence "L1PA4" < rmsk | in the Repeatmasker database. This is because Repeatmasker creates annotations < rmsk | by joining matches to partial pieces of the database together so there is no < rmsk | 1:1 relationship between its sequence database and the annotations. To learn < rmsk | more, you can read the Repeatmasker paper, its source code or reach out to the < rmsk | Repeatmasker authors, your local expert on transposable elements or us. < rmsk |