---------------------------------------------------------------
hg38.trackDb.tableName : Differences exist between hgwbeta and hgw2
7698,7699d7697
< decipherContainer
< decipherDDG2P
---------------------------------------------------------------
hg38.trackDb.shortLabel : Differences exist between hgwbeta and hgw2
2554d2553
< DECIPHER
2556d2554
< DECIPHER DDG2P
---------------------------------------------------------------
hg38.trackDb.type : Differences exist between hgwbeta and hgw2
32d31
<
525d523
< bigBed 9 +
---------------------------------------------------------------
hg38.trackDb.longLabel : Differences exist between hgwbeta and hgw2
1761d1760
< DECIPHER
1764d1762
< DECIPHER: Developmental Disorders panel in the Gene2Phenotype database (DDG2P)
---------------------------------------------------------------
hg38.trackDb.visibility : Differences exist between hgwbeta and hgw2
5824a5825
> 0
9883,9885d9883
< 3
< 3
< 3
---------------------------------------------------------------
hg38.trackDb.priority : Differences exist between hgwbeta and hgw2
1c1
< -7
---
> -6
189,190d188
< 100
< 100
---------------------------------------------------------------
hg38.trackDb.colorR : Differences exist between hgwbeta and hgw2
5139,5140d5138
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.colorG : Differences exist between hgwbeta and hgw2
8752,8753d8751
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.colorB : Differences exist between hgwbeta and hgw2
5136,5137d5135
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.altColorR : Differences exist between hgwbeta and hgw2
4864,4865d4863
< 127
< 127
---------------------------------------------------------------
hg38.trackDb.altColorG : Differences exist between hgwbeta and hgw2
8472,8473d8471
< 127
< 127
---------------------------------------------------------------
hg38.trackDb.altColorB : Differences exist between hgwbeta and hgw2
5136,5137d5135
< 127
< 127
---------------------------------------------------------------
hg38.trackDb.useScore : Differences exist between hgwbeta and hgw2
9884,9885d9883
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.private : Differences exist between hgwbeta and hgw2
10254,10255d10253
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.restrictCount : Differences exist between hgwbeta and hgw2
10232,10233d10231
< 0
< 0
---------------------------------------------------------------
hg38.trackDb.restrictList : Differences exist between hgwbeta and hgw2
10232,10233d10231
<
<
---------------------------------------------------------------
hg38.trackDb.url : Differences exist between hgwbeta and hgw2
2728,2729d2727
<
<
2736c2734
< http://crispor.gi.ucsc.edu/crispor.py?org=$D&pos=$S:${&pam=NGG
---
> http://crispor.tefor.net/crispor.py?org=$D&pos=$S:${&pam=NGG
---------------------------------------------------------------
hg38.trackDb.grp : Differences exist between hgwbeta and hgw2
994,995d993
< phenDis
< phenDis
---------------------------------------------------------------
hg38.trackDb.canPack : Differences exist between hgwbeta and hgw2
7599,7600d7598
< 0
< 1
---------------------------------------------------------------
hg38.trackDb.settings : Differences exist between hgwbeta and hgw2
(RR fields taken from public MySql server, not individual machine)
15668c15668
< cartVersion | cartVersion 7
---
> cartVersion | cartVersion 6
28496c28496
< crisprAllTargets | url http://crispor.gi.ucsc.edu/crispor.py?org=$D&pos=$S:${&pam=NGG
---
> crisprAllTargets | url http://crispor.tefor.net/crispor.py?org=$D&pos=$S:${&pam=NGG
28959c28959
< decipher | html decipherContainer.html
---
> decipher | html decipher
28964d28963
< decipher | parent decipherContainer
28972c28971
< decipher | visibility pack
---
> decipher | visibility hide
28974,28997d28972
< decipherContainer | settings
< decipherContainer | cartVersion 7
< decipherContainer | group phenDis
< decipherContainer | longLabel DECIPHER
< decipherContainer | shortLabel DECIPHER
< decipherContainer | superTrack on
< decipherContainer | track decipherContainer
< decipherContainer |
< decipherDDG2P | settings
< decipherDDG2P | bigDataUrl /gbdb/hg38/decipher/ddg2pSyndromes.bb
< decipherDDG2P | filter.sample_size 0
< decipherDDG2P | filterValues.type loss,gain,del/dup
< decipherDDG2P | group phenDis
< decipherDDG2P | html decipherContainer.html
< decipherDDG2P | longLabel DECIPHER: Developmental Disorders panel in the Gene2Phenotype database (DDG2P)
< decipherDDG2P | mouseOver Position: $chrom:${chromStart}-${chromEnd}
Type of CNV: $type
Frequency of CNV: $frequency
Number of Observations: $observations
Sample Size of Study: $sample_size
< decipherDDG2P | noScoreFilter on
< decipherDDG2P | parent decipherContainer
< decipherDDG2P | searchIndex name
< decipherDDG2P | shortLabel DECIPHER DDG2P
< decipherDDG2P | track decipherDDG2P
< decipherDDG2P | type bigBed 9 +
< decipherDDG2P | visibility pack
< decipherDDG2P |
29001c28976
< decipherSnvs | html decipherContainer.html
---
> decipherSnvs | html decipher
29004d28978
< decipherSnvs | parent decipherContainer
29010c28984
< decipherSnvs | visibility pack
---
> decipherSnvs | visibility hide
57645c57619
< hgIkmc | mgiUrl https://www.informatics.jax.org//marker/$$
---
> hgIkmc | mgiUrl http://www.informatics.jax.org/marker/$$
96691c96665
< ncbiRefSeqOther | urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/612091" HGNC="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="https://www.informatics.jax.org//marker/$$"
---
> ncbiRefSeqOther | urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/612091" HGNC="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="http://www.informatics.jax.org/marker/$$"
106368c106342
< refSeqComposite | dbPrefixUrls hg="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" dm="http://flybase.org/reports/$$" ce="http://www.wormbase.org/db/gene/gene?name=$$" rn="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" sacCer="https://www.yeastgenome.org/locus/$$" danRer="https://zfin.org/$$" mm="https://www.informatics.jax.org//marker/$$" xenTro="https://www.xenbase.org/gene/showgene.do?method=display&geneId=$$"
---
> refSeqComposite | dbPrefixUrls hg="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" dm="http://flybase.org/reports/$$" ce="http://www.wormbase.org/db/gene/gene?name=$$" rn="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" sacCer="https://www.yeastgenome.org/locus/$$" danRer="https://zfin.org/$$" mm="http://www.informatics.jax.org/marker/$$" xenTro="https://www.xenbase.org/gene/showgene.do?method=display&geneId=$$"
not real time for settings for RR results.
Differences exist in html field