---------------------------------------------------------------


rn4.trackDb.html : Differences exist between hgwbeta and hgw2 

(RR fields taken from public MySql server, not individual machine)

4c4
< affyAllExonProbes | The <A HREF="https://www.affymetrix.com:443/estore/products_services/arrays/index.affx"
---
> affyAllExonProbes | The <A HREF="http://www.affymetrix.com/estore/products_services/arrays/index.affx"

117c117
< affyAllExonProbes | <B><A HREF="https://grib.upf.edu/" TARGET=_blank>SGP Genes</A>: </B> 
---
> affyAllExonProbes | <B><A HREF="http://grib.imim.es" TARGET=_blank>SGP Genes</A>: </B> 

196c196
< affyExonTissues | <LI><A HREF="https://assets.thermofisher.com/TFS-Assets/LSG/brochures/plier_technote.pdf" target="_blank"
---
> affyExonTissues | <LI><A HREF="http://tools.thermofisher.com/content/sfs/brochures/plier_technote.pdf" target="_blank"

208c208
< affyRAE230 | <A HREF="https://www.affymetrix.com:443/support/technical/byproduct.affx?product=rae230" TARGET=_blank>Affymetrix Product Support</A>
---
> affyRAE230 | <A HREF="http://www.affymetrix.com/support/technical/byproduct.affx?product=rae230" TARGET=_blank>Affymetrix Product Support</A>

226c226
< affyU34A | <A HREF="https://www.affymetrix.com:443/support/technical/byproduct.affx?product=rgu34" TARGET=_blank>Affymetrix Product Support</A>
---
> affyU34A | <A HREF="http://www.affymetrix.com/support/technical/byproduct.affx?product=rgu34" TARGET=_blank>Affymetrix Product Support</A>

535,538c535,539
< chainAilMel1 | LASTZ was developed at
< chainAilMel1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainAilMel1 | Bob Harris.
< chainAilMel1 | </P>
---
> chainAilMel1 | Lastz (previously known as blastz) was developed at
> chainAilMel1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainAilMel1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainAilMel1 | Ross Hardison.</P>

541c542
< chainAilMel1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainAilMel1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

732,735c733,737
< chainBosTau7 | LASTZ was developed at
< chainBosTau7 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainBosTau7 | Bob Harris.
< chainBosTau7 | </P>
---
> chainBosTau7 | Lastz (previously known as blastz) was developed at
> chainBosTau7 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainBosTau7 | TARGET=_blank>Pennsylvania State University</A> by 
> chainBosTau7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainBosTau7 | Ross Hardison.</P>

738c740
< chainBosTau7 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainBosTau7 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

929,932c931,935
< chainCanFam2 | LASTZ was developed at
< chainCanFam2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainCanFam2 | Bob Harris.
< chainCanFam2 | </P>
---
> chainCanFam2 | Lastz (previously known as blastz) was developed at
> chainCanFam2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainCanFam2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainCanFam2 | Ross Hardison.</P>

935c938
< chainCanFam2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainCanFam2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

1126,1129c1129,1133
< chainCavPor3 | LASTZ was developed at
< chainCavPor3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainCavPor3 | Bob Harris.
< chainCavPor3 | </P>
---
> chainCavPor3 | Lastz (previously known as blastz) was developed at
> chainCavPor3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainCavPor3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainCavPor3 | Ross Hardison.</P>

1132c1136
< chainCavPor3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainCavPor3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

1323,1326c1327,1331
< chainDanRer4 | LASTZ was developed at
< chainDanRer4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainDanRer4 | Bob Harris.
< chainDanRer4 | </P>
---
> chainDanRer4 | Lastz (previously known as blastz) was developed at
> chainDanRer4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainDanRer4 | TARGET=_blank>Pennsylvania State University</A> by 
> chainDanRer4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainDanRer4 | Ross Hardison.</P>

1329c1334
< chainDanRer4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainDanRer4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

1520,1523c1525,1529
< chainEquCab1 | LASTZ was developed at
< chainEquCab1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainEquCab1 | Bob Harris.
< chainEquCab1 | </P>
---
> chainEquCab1 | Lastz (previously known as blastz) was developed at
> chainEquCab1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainEquCab1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainEquCab1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainEquCab1 | Ross Hardison.</P>

1526c1532
< chainEquCab1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainEquCab1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

1717,1720c1723,1727
< chainGalGal3 | LASTZ was developed at
< chainGalGal3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainGalGal3 | Bob Harris.
< chainGalGal3 | </P>
---
> chainGalGal3 | Lastz (previously known as blastz) was developed at
> chainGalGal3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainGalGal3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainGalGal3 | Ross Hardison.</P>

1723c1730
< chainGalGal3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainGalGal3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

1914,1917c1921,1925
< chainHg19 | LASTZ was developed at
< chainHg19 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainHg19 | Bob Harris.
< chainHg19 | </P>
---
> chainHg19 | Lastz (previously known as blastz) was developed at
> chainHg19 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainHg19 | TARGET=_blank>Pennsylvania State University</A> by 
> chainHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainHg19 | Ross Hardison.</P>

1920c1928
< chainHg19 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainHg19 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

2111,2114c2119,2123
< chainMelGal1 | LASTZ was developed at
< chainMelGal1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainMelGal1 | Bob Harris.
< chainMelGal1 | </P>
---
> chainMelGal1 | Lastz (previously known as blastz) was developed at
> chainMelGal1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainMelGal1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainMelGal1 | Ross Hardison.</P>

2117c2126
< chainMelGal1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainMelGal1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

2308,2311c2317,2321
< chainMm9 | LASTZ was developed at
< chainMm9 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainMm9 | Bob Harris.
< chainMm9 | </P>
---
> chainMm9 | Lastz (previously known as blastz) was developed at
> chainMm9 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainMm9 | TARGET=_blank>Pennsylvania State University</A> by 
> chainMm9 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainMm9 | Ross Hardison.</P>

2314c2324
< chainMm9 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainMm9 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

2505,2508c2515,2519
< chainMonDom4 | LASTZ was developed at
< chainMonDom4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainMonDom4 | Bob Harris.
< chainMonDom4 | </P>
---
> chainMonDom4 | Lastz (previously known as blastz) was developed at
> chainMonDom4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainMonDom4 | TARGET=_blank>Pennsylvania State University</A> by 
> chainMonDom4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainMonDom4 | Ross Hardison.</P>

2511c2522
< chainMonDom4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainMonDom4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

2702,2705c2713,2717
< chainNetAilMel1 | LASTZ was developed at
< chainNetAilMel1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetAilMel1 | Bob Harris.
< chainNetAilMel1 | </P>
---
> chainNetAilMel1 | Lastz (previously known as blastz) was developed at
> chainNetAilMel1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetAilMel1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetAilMel1 | Ross Hardison.</P>

2708c2720
< chainNetAilMel1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetAilMel1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

2903,2906c2915,2919
< chainNetBosTau7 | LASTZ was developed at
< chainNetBosTau7 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetBosTau7 | Bob Harris.
< chainNetBosTau7 | </P>
---
> chainNetBosTau7 | Lastz (previously known as blastz) was developed at
> chainNetBosTau7 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetBosTau7 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetBosTau7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetBosTau7 | Ross Hardison.</P>

2909c2922
< chainNetBosTau7 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetBosTau7 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

3104,3107c3117,3121
< chainNetCanFam2 | LASTZ was developed at
< chainNetCanFam2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetCanFam2 | Bob Harris.
< chainNetCanFam2 | </P>
---
> chainNetCanFam2 | Lastz (previously known as blastz) was developed at
> chainNetCanFam2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetCanFam2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetCanFam2 | Ross Hardison.</P>

3110c3124
< chainNetCanFam2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetCanFam2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

3305,3308c3319,3323
< chainNetCavPor3 | LASTZ was developed at
< chainNetCavPor3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetCavPor3 | Bob Harris.
< chainNetCavPor3 | </P>
---
> chainNetCavPor3 | Lastz (previously known as blastz) was developed at
> chainNetCavPor3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetCavPor3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetCavPor3 | Ross Hardison.</P>

3311c3326
< chainNetCavPor3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetCavPor3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

3506,3509c3521,3525
< chainNetDanRer4 | LASTZ was developed at
< chainNetDanRer4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetDanRer4 | Bob Harris.
< chainNetDanRer4 | </P>
---
> chainNetDanRer4 | Lastz (previously known as blastz) was developed at
> chainNetDanRer4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetDanRer4 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetDanRer4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetDanRer4 | Ross Hardison.</P>

3512c3528
< chainNetDanRer4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetDanRer4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

3707,3710c3723,3727
< chainNetEquCab1 | LASTZ was developed at
< chainNetEquCab1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetEquCab1 | Bob Harris.
< chainNetEquCab1 | </P>
---
> chainNetEquCab1 | Lastz (previously known as blastz) was developed at
> chainNetEquCab1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetEquCab1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetEquCab1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetEquCab1 | Ross Hardison.</P>

3713c3730
< chainNetEquCab1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetEquCab1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

3908,3911c3925,3929
< chainNetGalGal3 | LASTZ was developed at
< chainNetGalGal3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetGalGal3 | Bob Harris.
< chainNetGalGal3 | </P>
---
> chainNetGalGal3 | Lastz (previously known as blastz) was developed at
> chainNetGalGal3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetGalGal3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetGalGal3 | Ross Hardison.</P>

3914c3932
< chainNetGalGal3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetGalGal3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

4109,4112c4127,4131
< chainNetHg19 | LASTZ was developed at
< chainNetHg19 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetHg19 | Bob Harris.
< chainNetHg19 | </P>
---
> chainNetHg19 | Lastz (previously known as blastz) was developed at
> chainNetHg19 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetHg19 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetHg19 | Ross Hardison.</P>

4115c4134
< chainNetHg19 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetHg19 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

4310,4313c4329,4333
< chainNetMelGal1 | LASTZ was developed at
< chainNetMelGal1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetMelGal1 | Bob Harris.
< chainNetMelGal1 | </P>
---
> chainNetMelGal1 | Lastz (previously known as blastz) was developed at
> chainNetMelGal1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetMelGal1 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetMelGal1 | Ross Hardison.</P>

4316c4336
< chainNetMelGal1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetMelGal1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

4511,4514c4531,4535
< chainNetMm9 | LASTZ was developed at
< chainNetMm9 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetMm9 | Bob Harris.
< chainNetMm9 | </P>
---
> chainNetMm9 | Lastz (previously known as blastz) was developed at
> chainNetMm9 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetMm9 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetMm9 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetMm9 | Ross Hardison.</P>

4517c4538
< chainNetMm9 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetMm9 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

4712,4715c4733,4737
< chainNetMonDom4 | LASTZ was developed at
< chainNetMonDom4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetMonDom4 | Bob Harris.
< chainNetMonDom4 | </P>
---
> chainNetMonDom4 | Lastz (previously known as blastz) was developed at
> chainNetMonDom4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetMonDom4 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetMonDom4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetMonDom4 | Ross Hardison.</P>

4718c4740
< chainNetMonDom4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetMonDom4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

4913,4916c4935,4939
< chainNetPanTro2 | LASTZ was developed at
< chainNetPanTro2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetPanTro2 | Bob Harris.
< chainNetPanTro2 | </P>
---
> chainNetPanTro2 | Lastz (previously known as blastz) was developed at
> chainNetPanTro2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetPanTro2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetPanTro2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetPanTro2 | Ross Hardison.</P>

4919c4942
< chainNetPanTro2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetPanTro2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

5114,5117c5137,5141
< chainNetRheMac2 | LASTZ was developed at
< chainNetRheMac2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetRheMac2 | Bob Harris.
< chainNetRheMac2 | </P>
---
> chainNetRheMac2 | Lastz (previously known as blastz) was developed at
> chainNetRheMac2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetRheMac2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetRheMac2 | Ross Hardison.</P>

5120c5144
< chainNetRheMac2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetRheMac2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

5315,5318c5339,5343
< chainNetXenTro3 | LASTZ was developed at
< chainNetXenTro3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainNetXenTro3 | Bob Harris.
< chainNetXenTro3 | </P>
---
> chainNetXenTro3 | Lastz (previously known as blastz) was developed at
> chainNetXenTro3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainNetXenTro3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainNetXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainNetXenTro3 | Ross Hardison.</P>

5321c5346
< chainNetXenTro3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainNetXenTro3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

5516,5519c5541,5545
< chainPanTro2 | LASTZ was developed at
< chainPanTro2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainPanTro2 | Bob Harris.
< chainPanTro2 | </P>
---
> chainPanTro2 | Lastz (previously known as blastz) was developed at
> chainPanTro2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainPanTro2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainPanTro2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainPanTro2 | Ross Hardison.</P>

5522c5548
< chainPanTro2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainPanTro2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

5713,5716c5739,5743
< chainRheMac2 | LASTZ was developed at
< chainRheMac2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainRheMac2 | Bob Harris.
< chainRheMac2 | </P>
---
> chainRheMac2 | Lastz (previously known as blastz) was developed at
> chainRheMac2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainRheMac2 | TARGET=_blank>Pennsylvania State University</A> by 
> chainRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainRheMac2 | Ross Hardison.</P>

5719c5746
< chainRheMac2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainRheMac2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

5910,5913c5937,5941
< chainXenTro3 | LASTZ was developed at
< chainXenTro3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< chainXenTro3 | Bob Harris.
< chainXenTro3 | </P>
---
> chainXenTro3 | Lastz (previously known as blastz) was developed at
> chainXenTro3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> chainXenTro3 | TARGET=_blank>Pennsylvania State University</A> by 
> chainXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> chainXenTro3 | Ross Hardison.</P>

5916c5944
< chainXenTro3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> chainXenTro3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

6145c6173
< cons9way | <A HREF="https://siepellab.labsites.cshl.edu/"
---
> cons9way | <A HREF="http://siepellab.labsites.cshl.edu/"

7481c7509
< mgcFullMrna | This track show alignments of rat mRNAs from the
---
> mgcFullMrna | This track shows alignments of rat mRNAs from the

7486c7514
< mgcFullMrna | clones for human, mouse, rat, xenopus, and zerbrafish genes.
---
> mgcFullMrna | clones for human, mouse, and rat genes.

7961c7989
< multiz9way | <A HREF="https://siepellab.labsites.cshl.edu/"
---
> multiz9way | <A HREF="http://siepellab.labsites.cshl.edu/"

8206,8209c8234,8238
< netAilMel1 | LASTZ was developed at
< netAilMel1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netAilMel1 | Bob Harris.
< netAilMel1 | </P>
---
> netAilMel1 | Lastz (previously known as blastz) was developed at
> netAilMel1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netAilMel1 | TARGET=_blank>Pennsylvania State University</A> by 
> netAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netAilMel1 | Ross Hardison.</P>

8212c8241
< netAilMel1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netAilMel1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

8403,8406c8432,8436
< netBosTau7 | LASTZ was developed at
< netBosTau7 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netBosTau7 | Bob Harris.
< netBosTau7 | </P>
---
> netBosTau7 | Lastz (previously known as blastz) was developed at
> netBosTau7 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netBosTau7 | TARGET=_blank>Pennsylvania State University</A> by 
> netBosTau7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netBosTau7 | Ross Hardison.</P>

8409c8439
< netBosTau7 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netBosTau7 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

8600,8603c8630,8634
< netCanFam2 | LASTZ was developed at
< netCanFam2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netCanFam2 | Bob Harris.
< netCanFam2 | </P>
---
> netCanFam2 | Lastz (previously known as blastz) was developed at
> netCanFam2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netCanFam2 | TARGET=_blank>Pennsylvania State University</A> by 
> netCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netCanFam2 | Ross Hardison.</P>

8606c8637
< netCanFam2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netCanFam2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

8797,8800c8828,8832
< netCavPor3 | LASTZ was developed at
< netCavPor3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netCavPor3 | Bob Harris.
< netCavPor3 | </P>
---
> netCavPor3 | Lastz (previously known as blastz) was developed at
> netCavPor3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netCavPor3 | TARGET=_blank>Pennsylvania State University</A> by 
> netCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netCavPor3 | Ross Hardison.</P>

8803c8835
< netCavPor3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netCavPor3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

8994,8997c9026,9030
< netDanRer4 | LASTZ was developed at
< netDanRer4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netDanRer4 | Bob Harris.
< netDanRer4 | </P>
---
> netDanRer4 | Lastz (previously known as blastz) was developed at
> netDanRer4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netDanRer4 | TARGET=_blank>Pennsylvania State University</A> by 
> netDanRer4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netDanRer4 | Ross Hardison.</P>

9000c9033
< netDanRer4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netDanRer4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

9191,9194c9224,9228
< netEquCab1 | LASTZ was developed at
< netEquCab1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netEquCab1 | Bob Harris.
< netEquCab1 | </P>
---
> netEquCab1 | Lastz (previously known as blastz) was developed at
> netEquCab1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netEquCab1 | TARGET=_blank>Pennsylvania State University</A> by 
> netEquCab1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netEquCab1 | Ross Hardison.</P>

9197c9231
< netEquCab1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netEquCab1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

9388,9391c9422,9426
< netGalGal3 | LASTZ was developed at
< netGalGal3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netGalGal3 | Bob Harris.
< netGalGal3 | </P>
---
> netGalGal3 | Lastz (previously known as blastz) was developed at
> netGalGal3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netGalGal3 | TARGET=_blank>Pennsylvania State University</A> by 
> netGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netGalGal3 | Ross Hardison.</P>

9394c9429
< netGalGal3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netGalGal3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

9585,9588c9620,9624
< netHg19 | LASTZ was developed at
< netHg19 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netHg19 | Bob Harris.
< netHg19 | </P>
---
> netHg19 | Lastz (previously known as blastz) was developed at
> netHg19 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netHg19 | TARGET=_blank>Pennsylvania State University</A> by 
> netHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netHg19 | Ross Hardison.</P>

9591c9627
< netHg19 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netHg19 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

9782,9785c9818,9822
< netMelGal1 | LASTZ was developed at
< netMelGal1 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netMelGal1 | Bob Harris.
< netMelGal1 | </P>
---
> netMelGal1 | Lastz (previously known as blastz) was developed at
> netMelGal1 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netMelGal1 | TARGET=_blank>Pennsylvania State University</A> by 
> netMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netMelGal1 | Ross Hardison.</P>

9788c9825
< netMelGal1 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netMelGal1 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

9979,9982c10016,10020
< netMm9 | LASTZ was developed at
< netMm9 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netMm9 | Bob Harris.
< netMm9 | </P>
---
> netMm9 | Lastz (previously known as blastz) was developed at
> netMm9 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netMm9 | TARGET=_blank>Pennsylvania State University</A> by 
> netMm9 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netMm9 | Ross Hardison.</P>

9985c10023
< netMm9 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netMm9 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

10176,10179c10214,10218
< netMonDom4 | LASTZ was developed at
< netMonDom4 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netMonDom4 | Bob Harris.
< netMonDom4 | </P>
---
> netMonDom4 | Lastz (previously known as blastz) was developed at
> netMonDom4 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netMonDom4 | TARGET=_blank>Pennsylvania State University</A> by 
> netMonDom4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netMonDom4 | Ross Hardison.</P>

10182c10221
< netMonDom4 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netMonDom4 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

10373,10376c10412,10416
< netPanTro2 | LASTZ was developed at
< netPanTro2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netPanTro2 | Bob Harris.
< netPanTro2 | </P>
---
> netPanTro2 | Lastz (previously known as blastz) was developed at
> netPanTro2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netPanTro2 | TARGET=_blank>Pennsylvania State University</A> by 
> netPanTro2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netPanTro2 | Ross Hardison.</P>

10379c10419
< netPanTro2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netPanTro2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

10570,10573c10610,10614
< netRheMac2 | LASTZ was developed at
< netRheMac2 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netRheMac2 | Bob Harris.
< netRheMac2 | </P>
---
> netRheMac2 | Lastz (previously known as blastz) was developed at
> netRheMac2 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netRheMac2 | TARGET=_blank>Pennsylvania State University</A> by 
> netRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netRheMac2 | Ross Hardison.</P>

10576c10617
< netRheMac2 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netRheMac2 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

10767,10770c10808,10812
< netXenTro3 | LASTZ was developed at
< netXenTro3 | <A HREF="http://www.bx.psu.edu/~rsharris/lastz/" TARGET=_blank>Miller Lab at Pennsylvania State University</A> by 
< netXenTro3 | Bob Harris.
< netXenTro3 | </P>
---
> netXenTro3 | Lastz (previously known as blastz) was developed at
> netXenTro3 | <A HREF="http://www.bx.psu.edu/miller_lab/" 
> netXenTro3 | TARGET=_blank>Pennsylvania State University</A> by 
> netXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from
> netXenTro3 | Ross Hardison.</P>

10773c10815
< netXenTro3 | <A HREF="https://www.repeatmasker.org/" TARGET=_blank>RepeatMasker</A>
---
> netXenTro3 | <A HREF="http://www.repeatmasker.org" TARGET=_blank>RepeatMasker</A>

11486c11528
< rmsk | <a href="https://www.repeatmasker.org/" target="_blank">RepeatMasker</a>
---
> rmsk | <a href="http://www.repeatmasker.org/" target="_blank">RepeatMasker</a>

11505,11517d11546
< rmsk | <p>
< rmsk | When analyzing the data tables of this track, keep in mind that Repbase is not the same 
< rmsk | as the Repeatmasker sequence database and that the repeat names in the
< rmsk | Repeatmasker output are not the same as the sequence names in the Repeatmasker
< rmsk | database.  Concretely, you can find a name such as "L1PA4" in the Repeatmasker
< rmsk | output and this track, but there is not necessarily a single sequence "L1PA4"
< rmsk | in the Repeatmasker database. This is because Repeatmasker creates annotations
< rmsk | by joining matches to partial pieces of the database together so there is no
< rmsk | 1:1 relationship between its sequence database and the annotations. To learn
< rmsk | more, you can read the Repeatmasker paper, its source code or reach out to the
< rmsk | Repeatmasker authors, your local expert on transposable elements or us.
< rmsk | </p>
< rmsk | 

11567,11568c11596,11597
< rmsk | <a href="https://www.repeatmasker.org/" target="_blank">
< rmsk | https://www.repeatmasker.org/</a>. 1996-2010.
---
> rmsk | <a href="http://www.repeatmasker.org" target="_blank">
> rmsk | http://www.repeatmasker.org</a>. 1996-2010.

11610c11639
< sgpGene | <a href="https://grib.upf.edu/" target="_blank">Grup de Recerca
---
> sgpGene | <a href="http://grib.imim.es" target="_blank">Grup de Recerca