--------------------------------------------------------------- mm9.trackDb.html : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 210c210 < affyAllExonProbes | The affyAllExonProbes | The SGP Genes: --- > affyAllExonProbes | SGP Genes: 402c402 < affyExonTissues |
  • affyExonTissues |
  • affyGnfU74A | Affymetrix's affyGnfU74B | Affymetrix's affyGnfU74C | Affymetrix's affyMOE430 | affyU74 | allenBrainAli | within the Miller Lab at Pennsylvania State University by < chainAilMel1 | Bob Harris. < chainAilMel1 |

    --- > chainAilMel1 | Lastz (previously known as blastz) was developed at > chainAilMel1 | chainAilMel1 | TARGET=_blank>Pennsylvania State University by > chainAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainAilMel1 | Ross Hardison.

    1167c1168 < chainAilMel1 | RepeatMasker --- > chainAilMel1 | RepeatMasker 1358,1361c1359,1363 < chainAnoCar2 | LASTZ was developed at < chainAnoCar2 | Miller Lab at Pennsylvania State University by < chainAnoCar2 | Bob Harris. < chainAnoCar2 |

    --- > chainAnoCar2 | Lastz (previously known as blastz) was developed at > chainAnoCar2 | chainAnoCar2 | TARGET=_blank>Pennsylvania State University by > chainAnoCar2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainAnoCar2 | Ross Hardison.

    1364c1366 < chainAnoCar2 | RepeatMasker --- > chainAnoCar2 | RepeatMasker 1555,1558c1557,1561 < chainBosTau6 | LASTZ was developed at < chainBosTau6 | Miller Lab at Pennsylvania State University by < chainBosTau6 | Bob Harris. < chainBosTau6 |

    --- > chainBosTau6 | Lastz (previously known as blastz) was developed at > chainBosTau6 | chainBosTau6 | TARGET=_blank>Pennsylvania State University by > chainBosTau6 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainBosTau6 | Ross Hardison.

    1561c1564 < chainBosTau6 | RepeatMasker --- > chainBosTau6 | RepeatMasker 1752,1755c1755,1759 < chainBraFlo1 | LASTZ was developed at < chainBraFlo1 | Miller Lab at Pennsylvania State University by < chainBraFlo1 | Bob Harris. < chainBraFlo1 |

    --- > chainBraFlo1 | Lastz (previously known as blastz) was developed at > chainBraFlo1 | chainBraFlo1 | TARGET=_blank>Pennsylvania State University by > chainBraFlo1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainBraFlo1 | Ross Hardison.

    1758c1762 < chainBraFlo1 | RepeatMasker --- > chainBraFlo1 | RepeatMasker 1949,1952c1953,1957 < chainCalJac3 | LASTZ was developed at < chainCalJac3 | Miller Lab at Pennsylvania State University by < chainCalJac3 | Bob Harris. < chainCalJac3 |

    --- > chainCalJac3 | Lastz (previously known as blastz) was developed at > chainCalJac3 | chainCalJac3 | TARGET=_blank>Pennsylvania State University by > chainCalJac3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainCalJac3 | Ross Hardison.

    1955c1960 < chainCalJac3 | RepeatMasker --- > chainCalJac3 | RepeatMasker 2146,2149c2151,2155 < chainCanFam2 | LASTZ was developed at < chainCanFam2 | Miller Lab at Pennsylvania State University by < chainCanFam2 | Bob Harris. < chainCanFam2 |

    --- > chainCanFam2 | Lastz (previously known as blastz) was developed at > chainCanFam2 | chainCanFam2 | TARGET=_blank>Pennsylvania State University by > chainCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainCanFam2 | Ross Hardison.

    2152c2158 < chainCanFam2 | RepeatMasker --- > chainCanFam2 | RepeatMasker 2343,2346c2349,2353 < chainCavPor3 | LASTZ was developed at < chainCavPor3 | Miller Lab at Pennsylvania State University by < chainCavPor3 | Bob Harris. < chainCavPor3 |

    --- > chainCavPor3 | Lastz (previously known as blastz) was developed at > chainCavPor3 | chainCavPor3 | TARGET=_blank>Pennsylvania State University by > chainCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainCavPor3 | Ross Hardison.

    2349c2356 < chainCavPor3 | RepeatMasker --- > chainCavPor3 | RepeatMasker 2540,2543c2547,2551 < chainDanRer7 | LASTZ was developed at < chainDanRer7 | Miller Lab at Pennsylvania State University by < chainDanRer7 | Bob Harris. < chainDanRer7 |

    --- > chainDanRer7 | Lastz (previously known as blastz) was developed at > chainDanRer7 | chainDanRer7 | TARGET=_blank>Pennsylvania State University by > chainDanRer7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainDanRer7 | Ross Hardison.

    2546c2554 < chainDanRer7 | RepeatMasker --- > chainDanRer7 | RepeatMasker 2737,2740c2745,2749 < chainEquCab2 | LASTZ was developed at < chainEquCab2 | Miller Lab at Pennsylvania State University by < chainEquCab2 | Bob Harris. < chainEquCab2 |

    --- > chainEquCab2 | Lastz (previously known as blastz) was developed at > chainEquCab2 | chainEquCab2 | TARGET=_blank>Pennsylvania State University by > chainEquCab2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainEquCab2 | Ross Hardison.

    2743c2752 < chainEquCab2 | RepeatMasker --- > chainEquCab2 | RepeatMasker 2934,2937c2943,2947 < chainFelCat4 | LASTZ was developed at < chainFelCat4 | Miller Lab at Pennsylvania State University by < chainFelCat4 | Bob Harris. < chainFelCat4 |

    --- > chainFelCat4 | Lastz (previously known as blastz) was developed at > chainFelCat4 | chainFelCat4 | TARGET=_blank>Pennsylvania State University by > chainFelCat4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainFelCat4 | Ross Hardison.

    2940c2950 < chainFelCat4 | RepeatMasker --- > chainFelCat4 | RepeatMasker 3131,3134c3141,3145 < chainFr2 | LASTZ was developed at < chainFr2 | Miller Lab at Pennsylvania State University by < chainFr2 | Bob Harris. < chainFr2 |

    --- > chainFr2 | Lastz (previously known as blastz) was developed at > chainFr2 | chainFr2 | TARGET=_blank>Pennsylvania State University by > chainFr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainFr2 | Ross Hardison.

    3137c3148 < chainFr2 | RepeatMasker --- > chainFr2 | RepeatMasker 3328,3331c3339,3343 < chainGalGal3 | LASTZ was developed at < chainGalGal3 | Miller Lab at Pennsylvania State University by < chainGalGal3 | Bob Harris. < chainGalGal3 |

    --- > chainGalGal3 | Lastz (previously known as blastz) was developed at > chainGalGal3 | chainGalGal3 | TARGET=_blank>Pennsylvania State University by > chainGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainGalGal3 | Ross Hardison.

    3334c3346 < chainGalGal3 | RepeatMasker --- > chainGalGal3 | RepeatMasker 3525,3528c3537,3541 < chainGasAcu1 | LASTZ was developed at < chainGasAcu1 | Miller Lab at Pennsylvania State University by < chainGasAcu1 | Bob Harris. < chainGasAcu1 |

    --- > chainGasAcu1 | Lastz (previously known as blastz) was developed at > chainGasAcu1 | chainGasAcu1 | TARGET=_blank>Pennsylvania State University by > chainGasAcu1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainGasAcu1 | Ross Hardison.

    3531c3544 < chainGasAcu1 | RepeatMasker --- > chainGasAcu1 | RepeatMasker 3722,3725c3735,3739 < chainHg19 | LASTZ was developed at < chainHg19 | Miller Lab at Pennsylvania State University by < chainHg19 | Bob Harris. < chainHg19 |

    --- > chainHg19 | Lastz (previously known as blastz) was developed at > chainHg19 | chainHg19 | TARGET=_blank>Pennsylvania State University by > chainHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainHg19 | Ross Hardison.

    3728c3742 < chainHg19 | RepeatMasker --- > chainHg19 | RepeatMasker 3919,3922c3933,3937 < chainLoxAfr3 | LASTZ was developed at < chainLoxAfr3 | Miller Lab at Pennsylvania State University by < chainLoxAfr3 | Bob Harris. < chainLoxAfr3 |

    --- > chainLoxAfr3 | Lastz (previously known as blastz) was developed at > chainLoxAfr3 | chainLoxAfr3 | TARGET=_blank>Pennsylvania State University by > chainLoxAfr3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainLoxAfr3 | Ross Hardison.

    3925c3940 < chainLoxAfr3 | RepeatMasker --- > chainLoxAfr3 | RepeatMasker 4116,4119c4131,4135 < chainMelGal1 | LASTZ was developed at < chainMelGal1 | Miller Lab at Pennsylvania State University by < chainMelGal1 | Bob Harris. < chainMelGal1 |

    --- > chainMelGal1 | Lastz (previously known as blastz) was developed at > chainMelGal1 | chainMelGal1 | TARGET=_blank>Pennsylvania State University by > chainMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainMelGal1 | Ross Hardison.

    4122c4138 < chainMelGal1 | RepeatMasker --- > chainMelGal1 | RepeatMasker 4313,4316c4329,4333 < chainMonDom5 | LASTZ was developed at < chainMonDom5 | Miller Lab at Pennsylvania State University by < chainMonDom5 | Bob Harris. < chainMonDom5 |

    --- > chainMonDom5 | Lastz (previously known as blastz) was developed at > chainMonDom5 | chainMonDom5 | TARGET=_blank>Pennsylvania State University by > chainMonDom5 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainMonDom5 | Ross Hardison.

    4319c4336 < chainMonDom5 | RepeatMasker --- > chainMonDom5 | RepeatMasker 4510,4513c4527,4531 < chainNetAilMel1 | LASTZ was developed at < chainNetAilMel1 | Miller Lab at Pennsylvania State University by < chainNetAilMel1 | Bob Harris. < chainNetAilMel1 |

    --- > chainNetAilMel1 | Lastz (previously known as blastz) was developed at > chainNetAilMel1 | chainNetAilMel1 | TARGET=_blank>Pennsylvania State University by > chainNetAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetAilMel1 | Ross Hardison.

    4516c4534 < chainNetAilMel1 | RepeatMasker --- > chainNetAilMel1 | RepeatMasker 4711,4714c4729,4733 < chainNetAnoCar2 | LASTZ was developed at < chainNetAnoCar2 | Miller Lab at Pennsylvania State University by < chainNetAnoCar2 | Bob Harris. < chainNetAnoCar2 |

    --- > chainNetAnoCar2 | Lastz (previously known as blastz) was developed at > chainNetAnoCar2 | chainNetAnoCar2 | TARGET=_blank>Pennsylvania State University by > chainNetAnoCar2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetAnoCar2 | Ross Hardison.

    4717c4736 < chainNetAnoCar2 | RepeatMasker --- > chainNetAnoCar2 | RepeatMasker 4912,4915c4931,4935 < chainNetBosTau6 | LASTZ was developed at < chainNetBosTau6 | Miller Lab at Pennsylvania State University by < chainNetBosTau6 | Bob Harris. < chainNetBosTau6 |

    --- > chainNetBosTau6 | Lastz (previously known as blastz) was developed at > chainNetBosTau6 | chainNetBosTau6 | TARGET=_blank>Pennsylvania State University by > chainNetBosTau6 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetBosTau6 | Ross Hardison.

    4918c4938 < chainNetBosTau6 | RepeatMasker --- > chainNetBosTau6 | RepeatMasker 5113,5116c5133,5137 < chainNetBraFlo1 | LASTZ was developed at < chainNetBraFlo1 | Miller Lab at Pennsylvania State University by < chainNetBraFlo1 | Bob Harris. < chainNetBraFlo1 |

    --- > chainNetBraFlo1 | Lastz (previously known as blastz) was developed at > chainNetBraFlo1 | chainNetBraFlo1 | TARGET=_blank>Pennsylvania State University by > chainNetBraFlo1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetBraFlo1 | Ross Hardison.

    5119c5140 < chainNetBraFlo1 | RepeatMasker --- > chainNetBraFlo1 | RepeatMasker 5314,5317c5335,5339 < chainNetCalJac3 | LASTZ was developed at < chainNetCalJac3 | Miller Lab at Pennsylvania State University by < chainNetCalJac3 | Bob Harris. < chainNetCalJac3 |

    --- > chainNetCalJac3 | Lastz (previously known as blastz) was developed at > chainNetCalJac3 | chainNetCalJac3 | TARGET=_blank>Pennsylvania State University by > chainNetCalJac3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetCalJac3 | Ross Hardison.

    5320c5342 < chainNetCalJac3 | RepeatMasker --- > chainNetCalJac3 | RepeatMasker 5515,5518c5537,5541 < chainNetCanFam2 | LASTZ was developed at < chainNetCanFam2 | Miller Lab at Pennsylvania State University by < chainNetCanFam2 | Bob Harris. < chainNetCanFam2 |

    --- > chainNetCanFam2 | Lastz (previously known as blastz) was developed at > chainNetCanFam2 | chainNetCanFam2 | TARGET=_blank>Pennsylvania State University by > chainNetCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetCanFam2 | Ross Hardison.

    5521c5544 < chainNetCanFam2 | RepeatMasker --- > chainNetCanFam2 | RepeatMasker 5716,5719c5739,5743 < chainNetCavPor3 | LASTZ was developed at < chainNetCavPor3 | Miller Lab at Pennsylvania State University by < chainNetCavPor3 | Bob Harris. < chainNetCavPor3 |

    --- > chainNetCavPor3 | Lastz (previously known as blastz) was developed at > chainNetCavPor3 | chainNetCavPor3 | TARGET=_blank>Pennsylvania State University by > chainNetCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetCavPor3 | Ross Hardison.

    5722c5746 < chainNetCavPor3 | RepeatMasker --- > chainNetCavPor3 | RepeatMasker 5917,5920c5941,5945 < chainNetDanRer7 | LASTZ was developed at < chainNetDanRer7 | Miller Lab at Pennsylvania State University by < chainNetDanRer7 | Bob Harris. < chainNetDanRer7 |

    --- > chainNetDanRer7 | Lastz (previously known as blastz) was developed at > chainNetDanRer7 | chainNetDanRer7 | TARGET=_blank>Pennsylvania State University by > chainNetDanRer7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetDanRer7 | Ross Hardison.

    5923c5948 < chainNetDanRer7 | RepeatMasker --- > chainNetDanRer7 | RepeatMasker 6118,6121c6143,6147 < chainNetEquCab2 | LASTZ was developed at < chainNetEquCab2 | Miller Lab at Pennsylvania State University by < chainNetEquCab2 | Bob Harris. < chainNetEquCab2 |

    --- > chainNetEquCab2 | Lastz (previously known as blastz) was developed at > chainNetEquCab2 | chainNetEquCab2 | TARGET=_blank>Pennsylvania State University by > chainNetEquCab2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetEquCab2 | Ross Hardison.

    6124c6150 < chainNetEquCab2 | RepeatMasker --- > chainNetEquCab2 | RepeatMasker 6319,6322c6345,6349 < chainNetFelCat4 | LASTZ was developed at < chainNetFelCat4 | Miller Lab at Pennsylvania State University by < chainNetFelCat4 | Bob Harris. < chainNetFelCat4 |

    --- > chainNetFelCat4 | Lastz (previously known as blastz) was developed at > chainNetFelCat4 | chainNetFelCat4 | TARGET=_blank>Pennsylvania State University by > chainNetFelCat4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetFelCat4 | Ross Hardison.

    6325c6352 < chainNetFelCat4 | RepeatMasker --- > chainNetFelCat4 | RepeatMasker 6520,6523c6547,6551 < chainNetFr2 | LASTZ was developed at < chainNetFr2 | Miller Lab at Pennsylvania State University by < chainNetFr2 | Bob Harris. < chainNetFr2 |

    --- > chainNetFr2 | Lastz (previously known as blastz) was developed at > chainNetFr2 | chainNetFr2 | TARGET=_blank>Pennsylvania State University by > chainNetFr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetFr2 | Ross Hardison.

    6526c6554 < chainNetFr2 | RepeatMasker --- > chainNetFr2 | RepeatMasker 6721,6724c6749,6753 < chainNetGalGal3 | LASTZ was developed at < chainNetGalGal3 | Miller Lab at Pennsylvania State University by < chainNetGalGal3 | Bob Harris. < chainNetGalGal3 |

    --- > chainNetGalGal3 | Lastz (previously known as blastz) was developed at > chainNetGalGal3 | chainNetGalGal3 | TARGET=_blank>Pennsylvania State University by > chainNetGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetGalGal3 | Ross Hardison.

    6727c6756 < chainNetGalGal3 | RepeatMasker --- > chainNetGalGal3 | RepeatMasker 6922,6925c6951,6955 < chainNetGasAcu1 | LASTZ was developed at < chainNetGasAcu1 | Miller Lab at Pennsylvania State University by < chainNetGasAcu1 | Bob Harris. < chainNetGasAcu1 |

    --- > chainNetGasAcu1 | Lastz (previously known as blastz) was developed at > chainNetGasAcu1 | chainNetGasAcu1 | TARGET=_blank>Pennsylvania State University by > chainNetGasAcu1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetGasAcu1 | Ross Hardison.

    6928c6958 < chainNetGasAcu1 | RepeatMasker --- > chainNetGasAcu1 | RepeatMasker 7123,7126c7153,7157 < chainNetHg19 | LASTZ was developed at < chainNetHg19 | Miller Lab at Pennsylvania State University by < chainNetHg19 | Bob Harris. < chainNetHg19 |

    --- > chainNetHg19 | Lastz (previously known as blastz) was developed at > chainNetHg19 | chainNetHg19 | TARGET=_blank>Pennsylvania State University by > chainNetHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetHg19 | Ross Hardison.

    7129c7160 < chainNetHg19 | RepeatMasker --- > chainNetHg19 | RepeatMasker 7324,7327c7355,7359 < chainNetLoxAfr3 | LASTZ was developed at < chainNetLoxAfr3 | Miller Lab at Pennsylvania State University by < chainNetLoxAfr3 | Bob Harris. < chainNetLoxAfr3 |

    --- > chainNetLoxAfr3 | Lastz (previously known as blastz) was developed at > chainNetLoxAfr3 | chainNetLoxAfr3 | TARGET=_blank>Pennsylvania State University by > chainNetLoxAfr3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetLoxAfr3 | Ross Hardison.

    7330c7362 < chainNetLoxAfr3 | RepeatMasker --- > chainNetLoxAfr3 | RepeatMasker 7525,7528c7557,7561 < chainNetMelGal1 | LASTZ was developed at < chainNetMelGal1 | Miller Lab at Pennsylvania State University by < chainNetMelGal1 | Bob Harris. < chainNetMelGal1 |

    --- > chainNetMelGal1 | Lastz (previously known as blastz) was developed at > chainNetMelGal1 | chainNetMelGal1 | TARGET=_blank>Pennsylvania State University by > chainNetMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetMelGal1 | Ross Hardison.

    7531c7564 < chainNetMelGal1 | RepeatMasker --- > chainNetMelGal1 | RepeatMasker 7726,7729c7759,7763 < chainNetMonDom5 | LASTZ was developed at < chainNetMonDom5 | Miller Lab at Pennsylvania State University by < chainNetMonDom5 | Bob Harris. < chainNetMonDom5 |

    --- > chainNetMonDom5 | Lastz (previously known as blastz) was developed at > chainNetMonDom5 | chainNetMonDom5 | TARGET=_blank>Pennsylvania State University by > chainNetMonDom5 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetMonDom5 | Ross Hardison.

    7732c7766 < chainNetMonDom5 | RepeatMasker --- > chainNetMonDom5 | RepeatMasker 7927,7930c7961,7965 < chainNetOrnAna1 | LASTZ was developed at < chainNetOrnAna1 | Miller Lab at Pennsylvania State University by < chainNetOrnAna1 | Bob Harris. < chainNetOrnAna1 |

    --- > chainNetOrnAna1 | Lastz (previously known as blastz) was developed at > chainNetOrnAna1 | chainNetOrnAna1 | TARGET=_blank>Pennsylvania State University by > chainNetOrnAna1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetOrnAna1 | Ross Hardison.

    7933c7968 < chainNetOrnAna1 | RepeatMasker --- > chainNetOrnAna1 | RepeatMasker 8128,8131c8163,8167 < chainNetOryCun2 | LASTZ was developed at < chainNetOryCun2 | Miller Lab at Pennsylvania State University by < chainNetOryCun2 | Bob Harris. < chainNetOryCun2 |

    --- > chainNetOryCun2 | Lastz (previously known as blastz) was developed at > chainNetOryCun2 | chainNetOryCun2 | TARGET=_blank>Pennsylvania State University by > chainNetOryCun2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetOryCun2 | Ross Hardison.

    8134c8170 < chainNetOryCun2 | RepeatMasker --- > chainNetOryCun2 | RepeatMasker 8329,8332c8365,8369 < chainNetOryLat2 | LASTZ was developed at < chainNetOryLat2 | Miller Lab at Pennsylvania State University by < chainNetOryLat2 | Bob Harris. < chainNetOryLat2 |

    --- > chainNetOryLat2 | Lastz (previously known as blastz) was developed at > chainNetOryLat2 | chainNetOryLat2 | TARGET=_blank>Pennsylvania State University by > chainNetOryLat2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetOryLat2 | Ross Hardison.

    8335c8372 < chainNetOryLat2 | RepeatMasker --- > chainNetOryLat2 | RepeatMasker 8530,8533c8567,8571 < chainNetOviAri1 | LASTZ was developed at < chainNetOviAri1 | Miller Lab at Pennsylvania State University by < chainNetOviAri1 | Bob Harris. < chainNetOviAri1 |

    --- > chainNetOviAri1 | Lastz (previously known as blastz) was developed at > chainNetOviAri1 | chainNetOviAri1 | TARGET=_blank>Pennsylvania State University by > chainNetOviAri1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetOviAri1 | Ross Hardison.

    8536c8574 < chainNetOviAri1 | RepeatMasker --- > chainNetOviAri1 | RepeatMasker 8731,8734c8769,8773 < chainNetPanTro3 | LASTZ was developed at < chainNetPanTro3 | Miller Lab at Pennsylvania State University by < chainNetPanTro3 | Bob Harris. < chainNetPanTro3 |

    --- > chainNetPanTro3 | Lastz (previously known as blastz) was developed at > chainNetPanTro3 | chainNetPanTro3 | TARGET=_blank>Pennsylvania State University by > chainNetPanTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetPanTro3 | Ross Hardison.

    8737c8776 < chainNetPanTro3 | RepeatMasker --- > chainNetPanTro3 | RepeatMasker 8932,8935c8971,8975 < chainNetPetMar1 | LASTZ was developed at < chainNetPetMar1 | Miller Lab at Pennsylvania State University by < chainNetPetMar1 | Bob Harris. < chainNetPetMar1 |

    --- > chainNetPetMar1 | Lastz (previously known as blastz) was developed at > chainNetPetMar1 | chainNetPetMar1 | TARGET=_blank>Pennsylvania State University by > chainNetPetMar1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetPetMar1 | Ross Hardison.

    8938c8978 < chainNetPetMar1 | RepeatMasker --- > chainNetPetMar1 | RepeatMasker 9133,9136c9173,9177 < chainNetPonAbe2 | LASTZ was developed at < chainNetPonAbe2 | Miller Lab at Pennsylvania State University by < chainNetPonAbe2 | Bob Harris. < chainNetPonAbe2 |

    --- > chainNetPonAbe2 | Lastz (previously known as blastz) was developed at > chainNetPonAbe2 | chainNetPonAbe2 | TARGET=_blank>Pennsylvania State University by > chainNetPonAbe2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetPonAbe2 | Ross Hardison.

    9139c9180 < chainNetPonAbe2 | RepeatMasker --- > chainNetPonAbe2 | RepeatMasker 9334,9337c9375,9379 < chainNetRheMac2 | LASTZ was developed at < chainNetRheMac2 | Miller Lab at Pennsylvania State University by < chainNetRheMac2 | Bob Harris. < chainNetRheMac2 |

    --- > chainNetRheMac2 | Lastz (previously known as blastz) was developed at > chainNetRheMac2 | chainNetRheMac2 | TARGET=_blank>Pennsylvania State University by > chainNetRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetRheMac2 | Ross Hardison.

    9340c9382 < chainNetRheMac2 | RepeatMasker --- > chainNetRheMac2 | RepeatMasker 9535,9538c9577,9581 < chainNetRn4 | LASTZ was developed at < chainNetRn4 | Miller Lab at Pennsylvania State University by < chainNetRn4 | Bob Harris. < chainNetRn4 |

    --- > chainNetRn4 | Lastz (previously known as blastz) was developed at > chainNetRn4 | chainNetRn4 | TARGET=_blank>Pennsylvania State University by > chainNetRn4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetRn4 | Ross Hardison.

    9541c9584 < chainNetRn4 | RepeatMasker --- > chainNetRn4 | RepeatMasker 9736,9739c9779,9783 < chainNetSusScr2 | LASTZ was developed at < chainNetSusScr2 | Miller Lab at Pennsylvania State University by < chainNetSusScr2 | Bob Harris. < chainNetSusScr2 |

    --- > chainNetSusScr2 | Lastz (previously known as blastz) was developed at > chainNetSusScr2 | chainNetSusScr2 | TARGET=_blank>Pennsylvania State University by > chainNetSusScr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetSusScr2 | Ross Hardison.

    9742c9786 < chainNetSusScr2 | RepeatMasker --- > chainNetSusScr2 | RepeatMasker 9937,9940c9981,9985 < chainNetTetNig2 | LASTZ was developed at < chainNetTetNig2 | Miller Lab at Pennsylvania State University by < chainNetTetNig2 | Bob Harris. < chainNetTetNig2 |

    --- > chainNetTetNig2 | Lastz (previously known as blastz) was developed at > chainNetTetNig2 | chainNetTetNig2 | TARGET=_blank>Pennsylvania State University by > chainNetTetNig2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetTetNig2 | Ross Hardison.

    9943c9988 < chainNetTetNig2 | RepeatMasker --- > chainNetTetNig2 | RepeatMasker 10138,10141c10183,10187 < chainNetXenTro3 | LASTZ was developed at < chainNetXenTro3 | Miller Lab at Pennsylvania State University by < chainNetXenTro3 | Bob Harris. < chainNetXenTro3 |

    --- > chainNetXenTro3 | Lastz (previously known as blastz) was developed at > chainNetXenTro3 | chainNetXenTro3 | TARGET=_blank>Pennsylvania State University by > chainNetXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainNetXenTro3 | Ross Hardison.

    10144c10190 < chainNetXenTro3 | RepeatMasker --- > chainNetXenTro3 | RepeatMasker 10339,10342c10385,10389 < chainOrnAna1 | LASTZ was developed at < chainOrnAna1 | Miller Lab at Pennsylvania State University by < chainOrnAna1 | Bob Harris. < chainOrnAna1 |

    --- > chainOrnAna1 | Lastz (previously known as blastz) was developed at > chainOrnAna1 | chainOrnAna1 | TARGET=_blank>Pennsylvania State University by > chainOrnAna1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainOrnAna1 | Ross Hardison.

    10345c10392 < chainOrnAna1 | RepeatMasker --- > chainOrnAna1 | RepeatMasker 10536,10539c10583,10587 < chainOryCun2 | LASTZ was developed at < chainOryCun2 | Miller Lab at Pennsylvania State University by < chainOryCun2 | Bob Harris. < chainOryCun2 |

    --- > chainOryCun2 | Lastz (previously known as blastz) was developed at > chainOryCun2 | chainOryCun2 | TARGET=_blank>Pennsylvania State University by > chainOryCun2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainOryCun2 | Ross Hardison.

    10542c10590 < chainOryCun2 | RepeatMasker --- > chainOryCun2 | RepeatMasker 10733,10736c10781,10785 < chainOryLat2 | LASTZ was developed at < chainOryLat2 | Miller Lab at Pennsylvania State University by < chainOryLat2 | Bob Harris. < chainOryLat2 |

    --- > chainOryLat2 | Lastz (previously known as blastz) was developed at > chainOryLat2 | chainOryLat2 | TARGET=_blank>Pennsylvania State University by > chainOryLat2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainOryLat2 | Ross Hardison.

    10739c10788 < chainOryLat2 | RepeatMasker --- > chainOryLat2 | RepeatMasker 10930,10933c10979,10983 < chainOviAri1 | LASTZ was developed at < chainOviAri1 | Miller Lab at Pennsylvania State University by < chainOviAri1 | Bob Harris. < chainOviAri1 |

    --- > chainOviAri1 | Lastz (previously known as blastz) was developed at > chainOviAri1 | chainOviAri1 | TARGET=_blank>Pennsylvania State University by > chainOviAri1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainOviAri1 | Ross Hardison.

    10936c10986 < chainOviAri1 | RepeatMasker --- > chainOviAri1 | RepeatMasker 11127,11130c11177,11181 < chainPanTro3 | LASTZ was developed at < chainPanTro3 | Miller Lab at Pennsylvania State University by < chainPanTro3 | Bob Harris. < chainPanTro3 |

    --- > chainPanTro3 | Lastz (previously known as blastz) was developed at > chainPanTro3 | chainPanTro3 | TARGET=_blank>Pennsylvania State University by > chainPanTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainPanTro3 | Ross Hardison.

    11133c11184 < chainPanTro3 | RepeatMasker --- > chainPanTro3 | RepeatMasker 11324,11327c11375,11379 < chainPetMar1 | LASTZ was developed at < chainPetMar1 | Miller Lab at Pennsylvania State University by < chainPetMar1 | Bob Harris. < chainPetMar1 |

    --- > chainPetMar1 | Lastz (previously known as blastz) was developed at > chainPetMar1 | chainPetMar1 | TARGET=_blank>Pennsylvania State University by > chainPetMar1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainPetMar1 | Ross Hardison.

    11330c11382 < chainPetMar1 | RepeatMasker --- > chainPetMar1 | RepeatMasker 11521,11524c11573,11577 < chainPonAbe2 | LASTZ was developed at < chainPonAbe2 | Miller Lab at Pennsylvania State University by < chainPonAbe2 | Bob Harris. < chainPonAbe2 |

    --- > chainPonAbe2 | Lastz (previously known as blastz) was developed at > chainPonAbe2 | chainPonAbe2 | TARGET=_blank>Pennsylvania State University by > chainPonAbe2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainPonAbe2 | Ross Hardison.

    11527c11580 < chainPonAbe2 | RepeatMasker --- > chainPonAbe2 | RepeatMasker 11718,11721c11771,11775 < chainRheMac2 | LASTZ was developed at < chainRheMac2 | Miller Lab at Pennsylvania State University by < chainRheMac2 | Bob Harris. < chainRheMac2 |

    --- > chainRheMac2 | Lastz (previously known as blastz) was developed at > chainRheMac2 | chainRheMac2 | TARGET=_blank>Pennsylvania State University by > chainRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainRheMac2 | Ross Hardison.

    11724c11778 < chainRheMac2 | RepeatMasker --- > chainRheMac2 | RepeatMasker 11915,11918c11969,11973 < chainRn4 | LASTZ was developed at < chainRn4 | Miller Lab at Pennsylvania State University by < chainRn4 | Bob Harris. < chainRn4 |

    --- > chainRn4 | Lastz (previously known as blastz) was developed at > chainRn4 | chainRn4 | TARGET=_blank>Pennsylvania State University by > chainRn4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainRn4 | Ross Hardison.

    11921c11976 < chainRn4 | RepeatMasker --- > chainRn4 | RepeatMasker 12112,12115c12167,12171 < chainSusScr2 | LASTZ was developed at < chainSusScr2 | Miller Lab at Pennsylvania State University by < chainSusScr2 | Bob Harris. < chainSusScr2 |

    --- > chainSusScr2 | Lastz (previously known as blastz) was developed at > chainSusScr2 | chainSusScr2 | TARGET=_blank>Pennsylvania State University by > chainSusScr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainSusScr2 | Ross Hardison.

    12118c12174 < chainSusScr2 | RepeatMasker --- > chainSusScr2 | RepeatMasker 12309,12312c12365,12369 < chainTetNig2 | LASTZ was developed at < chainTetNig2 | Miller Lab at Pennsylvania State University by < chainTetNig2 | Bob Harris. < chainTetNig2 |

    --- > chainTetNig2 | Lastz (previously known as blastz) was developed at > chainTetNig2 | chainTetNig2 | TARGET=_blank>Pennsylvania State University by > chainTetNig2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainTetNig2 | Ross Hardison.

    12315c12372 < chainTetNig2 | RepeatMasker --- > chainTetNig2 | RepeatMasker 12506,12509c12563,12567 < chainXenTro3 | LASTZ was developed at < chainXenTro3 | Miller Lab at Pennsylvania State University by < chainXenTro3 | Bob Harris. < chainXenTro3 |

    --- > chainXenTro3 | Lastz (previously known as blastz) was developed at > chainXenTro3 | chainXenTro3 | TARGET=_blank>Pennsylvania State University by > chainXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > chainXenTro3 | Ross Hardison.

    12512c12570 < chainXenTro3 | RepeatMasker --- > chainXenTro3 | RepeatMasker 12650c12708 < cons30way | --- > cons30way | 13037c13095 < cons30way | cons30way | crispr | algorithms through the tool Crispor downloads page, which --- > crispr | href="http://crispor.tefor.net/downloads/">Crispor downloads page, which 13699c13757 < crisprRanges | algorithms through the tool crisprRanges | algorithms through the tool Crispor downloads page, which --- > crisprRanges | href="http://crispor.tefor.net/downloads/">Crispor downloads page, which 13916c13974 < crisprTargets | algorithms through the tool crisprTargets | algorithms through the tool Crispor downloads page, which --- > crisprTargets | href="http://crispor.tefor.net/downloads/">Crispor downloads page, which 14648c14706 < genomicSuperDups | at the genomicSuperDups | at the Exchangeable Gene --- > igtc | Exchangeable Gene 15263c15321 < jaxAllele | Mouse Genome --- > jaxAllele | Mouse Genome 15290c15348 < jaxAllele | MGI --- > jaxAllele | MGI 15321c15379 < jaxGeneTrap | Mouse Genome --- > jaxGeneTrap | Mouse Genome 15327c15385 < jaxGeneTrap | MGI --- > jaxGeneTrap | MGI 15335c15393 < jaxPhenotype | Mouse Genome --- > jaxPhenotype | Mouse Genome 15338c15396 < jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | jaxPhenotype | MGI --- > jaxPhenotype | MGI 15465c15523 < jaxQtl | --- > jaxQtl | 15472c15530 < jaxQtl | MGI --- > jaxQtl | MGI 15482c15540 < jaxRepTranscript | Mouse Genome --- > jaxRepTranscript | Mouse Genome 15490c15548 < jaxRepTranscript | MGI. --- > jaxRepTranscript | MGI. 15498c15556 < jaxRepTranscript | MGI --- > jaxRepTranscript | MGI 16571c16629 < multiz30way | --- > multiz30way | 16908c16966 < multiz30way | multiz30way | Miller Lab at Pennsylvania State University by < netAilMel1 | Bob Harris. < netAilMel1 |

    --- > netAilMel1 | Lastz (previously known as blastz) was developed at > netAilMel1 | netAilMel1 | TARGET=_blank>Pennsylvania State University by > netAilMel1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netAilMel1 | Ross Hardison.

    17159c17218 < netAilMel1 | RepeatMasker --- > netAilMel1 | RepeatMasker 17350,17353c17409,17413 < netAnoCar2 | LASTZ was developed at < netAnoCar2 | Miller Lab at Pennsylvania State University by < netAnoCar2 | Bob Harris. < netAnoCar2 |

    --- > netAnoCar2 | Lastz (previously known as blastz) was developed at > netAnoCar2 | netAnoCar2 | TARGET=_blank>Pennsylvania State University by > netAnoCar2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netAnoCar2 | Ross Hardison.

    17356c17416 < netAnoCar2 | RepeatMasker --- > netAnoCar2 | RepeatMasker 17547,17550c17607,17611 < netBosTau6 | LASTZ was developed at < netBosTau6 | Miller Lab at Pennsylvania State University by < netBosTau6 | Bob Harris. < netBosTau6 |

    --- > netBosTau6 | Lastz (previously known as blastz) was developed at > netBosTau6 | netBosTau6 | TARGET=_blank>Pennsylvania State University by > netBosTau6 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netBosTau6 | Ross Hardison.

    17553c17614 < netBosTau6 | RepeatMasker --- > netBosTau6 | RepeatMasker 17744,17747c17805,17809 < netBraFlo1 | LASTZ was developed at < netBraFlo1 | Miller Lab at Pennsylvania State University by < netBraFlo1 | Bob Harris. < netBraFlo1 |

    --- > netBraFlo1 | Lastz (previously known as blastz) was developed at > netBraFlo1 | netBraFlo1 | TARGET=_blank>Pennsylvania State University by > netBraFlo1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netBraFlo1 | Ross Hardison.

    17750c17812 < netBraFlo1 | RepeatMasker --- > netBraFlo1 | RepeatMasker 17941,17944c18003,18007 < netCalJac3 | LASTZ was developed at < netCalJac3 | Miller Lab at Pennsylvania State University by < netCalJac3 | Bob Harris. < netCalJac3 |

    --- > netCalJac3 | Lastz (previously known as blastz) was developed at > netCalJac3 | netCalJac3 | TARGET=_blank>Pennsylvania State University by > netCalJac3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netCalJac3 | Ross Hardison.

    17947c18010 < netCalJac3 | RepeatMasker --- > netCalJac3 | RepeatMasker 18138,18141c18201,18205 < netCanFam2 | LASTZ was developed at < netCanFam2 | Miller Lab at Pennsylvania State University by < netCanFam2 | Bob Harris. < netCanFam2 |

    --- > netCanFam2 | Lastz (previously known as blastz) was developed at > netCanFam2 | netCanFam2 | TARGET=_blank>Pennsylvania State University by > netCanFam2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netCanFam2 | Ross Hardison.

    18144c18208 < netCanFam2 | RepeatMasker --- > netCanFam2 | RepeatMasker 18335,18338c18399,18403 < netCavPor3 | LASTZ was developed at < netCavPor3 | Miller Lab at Pennsylvania State University by < netCavPor3 | Bob Harris. < netCavPor3 |

    --- > netCavPor3 | Lastz (previously known as blastz) was developed at > netCavPor3 | netCavPor3 | TARGET=_blank>Pennsylvania State University by > netCavPor3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netCavPor3 | Ross Hardison.

    18341c18406 < netCavPor3 | RepeatMasker --- > netCavPor3 | RepeatMasker 18532,18535c18597,18601 < netDanRer7 | LASTZ was developed at < netDanRer7 | Miller Lab at Pennsylvania State University by < netDanRer7 | Bob Harris. < netDanRer7 |

    --- > netDanRer7 | Lastz (previously known as blastz) was developed at > netDanRer7 | netDanRer7 | TARGET=_blank>Pennsylvania State University by > netDanRer7 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netDanRer7 | Ross Hardison.

    18538c18604 < netDanRer7 | RepeatMasker --- > netDanRer7 | RepeatMasker 18729,18732c18795,18799 < netEquCab2 | LASTZ was developed at < netEquCab2 | Miller Lab at Pennsylvania State University by < netEquCab2 | Bob Harris. < netEquCab2 |

    --- > netEquCab2 | Lastz (previously known as blastz) was developed at > netEquCab2 | netEquCab2 | TARGET=_blank>Pennsylvania State University by > netEquCab2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netEquCab2 | Ross Hardison.

    18735c18802 < netEquCab2 | RepeatMasker --- > netEquCab2 | RepeatMasker 18926,18929c18993,18997 < netFelCat4 | LASTZ was developed at < netFelCat4 | Miller Lab at Pennsylvania State University by < netFelCat4 | Bob Harris. < netFelCat4 |

    --- > netFelCat4 | Lastz (previously known as blastz) was developed at > netFelCat4 | netFelCat4 | TARGET=_blank>Pennsylvania State University by > netFelCat4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netFelCat4 | Ross Hardison.

    18932c19000 < netFelCat4 | RepeatMasker --- > netFelCat4 | RepeatMasker 19123,19126c19191,19195 < netFr2 | LASTZ was developed at < netFr2 | Miller Lab at Pennsylvania State University by < netFr2 | Bob Harris. < netFr2 |

    --- > netFr2 | Lastz (previously known as blastz) was developed at > netFr2 | netFr2 | TARGET=_blank>Pennsylvania State University by > netFr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netFr2 | Ross Hardison.

    19129c19198 < netFr2 | RepeatMasker --- > netFr2 | RepeatMasker 19320,19323c19389,19393 < netGalGal3 | LASTZ was developed at < netGalGal3 | Miller Lab at Pennsylvania State University by < netGalGal3 | Bob Harris. < netGalGal3 |

    --- > netGalGal3 | Lastz (previously known as blastz) was developed at > netGalGal3 | netGalGal3 | TARGET=_blank>Pennsylvania State University by > netGalGal3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netGalGal3 | Ross Hardison.

    19326c19396 < netGalGal3 | RepeatMasker --- > netGalGal3 | RepeatMasker 19517,19520c19587,19591 < netGasAcu1 | LASTZ was developed at < netGasAcu1 | Miller Lab at Pennsylvania State University by < netGasAcu1 | Bob Harris. < netGasAcu1 |

    --- > netGasAcu1 | Lastz (previously known as blastz) was developed at > netGasAcu1 | netGasAcu1 | TARGET=_blank>Pennsylvania State University by > netGasAcu1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netGasAcu1 | Ross Hardison.

    19523c19594 < netGasAcu1 | RepeatMasker --- > netGasAcu1 | RepeatMasker 19714,19717c19785,19789 < netHg19 | LASTZ was developed at < netHg19 | Miller Lab at Pennsylvania State University by < netHg19 | Bob Harris. < netHg19 |

    --- > netHg19 | Lastz (previously known as blastz) was developed at > netHg19 | netHg19 | TARGET=_blank>Pennsylvania State University by > netHg19 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netHg19 | Ross Hardison.

    19720c19792 < netHg19 | RepeatMasker --- > netHg19 | RepeatMasker 19911,19914c19983,19987 < netLoxAfr3 | LASTZ was developed at < netLoxAfr3 | Miller Lab at Pennsylvania State University by < netLoxAfr3 | Bob Harris. < netLoxAfr3 |

    --- > netLoxAfr3 | Lastz (previously known as blastz) was developed at > netLoxAfr3 | netLoxAfr3 | TARGET=_blank>Pennsylvania State University by > netLoxAfr3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netLoxAfr3 | Ross Hardison.

    19917c19990 < netLoxAfr3 | RepeatMasker --- > netLoxAfr3 | RepeatMasker 20108,20111c20181,20185 < netMelGal1 | LASTZ was developed at < netMelGal1 | Miller Lab at Pennsylvania State University by < netMelGal1 | Bob Harris. < netMelGal1 |

    --- > netMelGal1 | Lastz (previously known as blastz) was developed at > netMelGal1 | netMelGal1 | TARGET=_blank>Pennsylvania State University by > netMelGal1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netMelGal1 | Ross Hardison.

    20114c20188 < netMelGal1 | RepeatMasker --- > netMelGal1 | RepeatMasker 20305,20308c20379,20383 < netMonDom5 | LASTZ was developed at < netMonDom5 | Miller Lab at Pennsylvania State University by < netMonDom5 | Bob Harris. < netMonDom5 |

    --- > netMonDom5 | Lastz (previously known as blastz) was developed at > netMonDom5 | netMonDom5 | TARGET=_blank>Pennsylvania State University by > netMonDom5 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netMonDom5 | Ross Hardison.

    20311c20386 < netMonDom5 | RepeatMasker --- > netMonDom5 | RepeatMasker 20502,20505c20577,20581 < netOrnAna1 | LASTZ was developed at < netOrnAna1 | Miller Lab at Pennsylvania State University by < netOrnAna1 | Bob Harris. < netOrnAna1 |

    --- > netOrnAna1 | Lastz (previously known as blastz) was developed at > netOrnAna1 | netOrnAna1 | TARGET=_blank>Pennsylvania State University by > netOrnAna1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netOrnAna1 | Ross Hardison.

    20508c20584 < netOrnAna1 | RepeatMasker --- > netOrnAna1 | RepeatMasker 20699,20702c20775,20779 < netOryCun2 | LASTZ was developed at < netOryCun2 | Miller Lab at Pennsylvania State University by < netOryCun2 | Bob Harris. < netOryCun2 |

    --- > netOryCun2 | Lastz (previously known as blastz) was developed at > netOryCun2 | netOryCun2 | TARGET=_blank>Pennsylvania State University by > netOryCun2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netOryCun2 | Ross Hardison.

    20705c20782 < netOryCun2 | RepeatMasker --- > netOryCun2 | RepeatMasker 20896,20899c20973,20977 < netOryLat2 | LASTZ was developed at < netOryLat2 | Miller Lab at Pennsylvania State University by < netOryLat2 | Bob Harris. < netOryLat2 |

    --- > netOryLat2 | Lastz (previously known as blastz) was developed at > netOryLat2 | netOryLat2 | TARGET=_blank>Pennsylvania State University by > netOryLat2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netOryLat2 | Ross Hardison.

    20902c20980 < netOryLat2 | RepeatMasker --- > netOryLat2 | RepeatMasker 21093,21096c21171,21175 < netOviAri1 | LASTZ was developed at < netOviAri1 | Miller Lab at Pennsylvania State University by < netOviAri1 | Bob Harris. < netOviAri1 |

    --- > netOviAri1 | Lastz (previously known as blastz) was developed at > netOviAri1 | netOviAri1 | TARGET=_blank>Pennsylvania State University by > netOviAri1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netOviAri1 | Ross Hardison.

    21099c21178 < netOviAri1 | RepeatMasker --- > netOviAri1 | RepeatMasker 21290,21293c21369,21373 < netPanTro3 | LASTZ was developed at < netPanTro3 | Miller Lab at Pennsylvania State University by < netPanTro3 | Bob Harris. < netPanTro3 |

    --- > netPanTro3 | Lastz (previously known as blastz) was developed at > netPanTro3 | netPanTro3 | TARGET=_blank>Pennsylvania State University by > netPanTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netPanTro3 | Ross Hardison.

    21296c21376 < netPanTro3 | RepeatMasker --- > netPanTro3 | RepeatMasker 21487,21490c21567,21571 < netPetMar1 | LASTZ was developed at < netPetMar1 | Miller Lab at Pennsylvania State University by < netPetMar1 | Bob Harris. < netPetMar1 |

    --- > netPetMar1 | Lastz (previously known as blastz) was developed at > netPetMar1 | netPetMar1 | TARGET=_blank>Pennsylvania State University by > netPetMar1 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netPetMar1 | Ross Hardison.

    21493c21574 < netPetMar1 | RepeatMasker --- > netPetMar1 | RepeatMasker 21684,21687c21765,21769 < netPonAbe2 | LASTZ was developed at < netPonAbe2 | Miller Lab at Pennsylvania State University by < netPonAbe2 | Bob Harris. < netPonAbe2 |

    --- > netPonAbe2 | Lastz (previously known as blastz) was developed at > netPonAbe2 | netPonAbe2 | TARGET=_blank>Pennsylvania State University by > netPonAbe2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netPonAbe2 | Ross Hardison.

    21690c21772 < netPonAbe2 | RepeatMasker --- > netPonAbe2 | RepeatMasker 21881,21884c21963,21967 < netRheMac2 | LASTZ was developed at < netRheMac2 | Miller Lab at Pennsylvania State University by < netRheMac2 | Bob Harris. < netRheMac2 |

    --- > netRheMac2 | Lastz (previously known as blastz) was developed at > netRheMac2 | netRheMac2 | TARGET=_blank>Pennsylvania State University by > netRheMac2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netRheMac2 | Ross Hardison.

    21887c21970 < netRheMac2 | RepeatMasker --- > netRheMac2 | RepeatMasker 22078,22081c22161,22165 < netRn4 | LASTZ was developed at < netRn4 | Miller Lab at Pennsylvania State University by < netRn4 | Bob Harris. < netRn4 |

    --- > netRn4 | Lastz (previously known as blastz) was developed at > netRn4 | netRn4 | TARGET=_blank>Pennsylvania State University by > netRn4 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netRn4 | Ross Hardison.

    22084c22168 < netRn4 | RepeatMasker --- > netRn4 | RepeatMasker 22275,22278c22359,22363 < netSusScr2 | LASTZ was developed at < netSusScr2 | Miller Lab at Pennsylvania State University by < netSusScr2 | Bob Harris. < netSusScr2 |

    --- > netSusScr2 | Lastz (previously known as blastz) was developed at > netSusScr2 | netSusScr2 | TARGET=_blank>Pennsylvania State University by > netSusScr2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netSusScr2 | Ross Hardison.

    22281c22366 < netSusScr2 | RepeatMasker --- > netSusScr2 | RepeatMasker 22472,22475c22557,22561 < netTetNig2 | LASTZ was developed at < netTetNig2 | Miller Lab at Pennsylvania State University by < netTetNig2 | Bob Harris. < netTetNig2 |

    --- > netTetNig2 | Lastz (previously known as blastz) was developed at > netTetNig2 | netTetNig2 | TARGET=_blank>Pennsylvania State University by > netTetNig2 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netTetNig2 | Ross Hardison.

    22478c22564 < netTetNig2 | RepeatMasker --- > netTetNig2 | RepeatMasker 22669,22672c22755,22759 < netXenTro3 | LASTZ was developed at < netXenTro3 | Miller Lab at Pennsylvania State University by < netXenTro3 | Bob Harris. < netXenTro3 |

    --- > netXenTro3 | Lastz (previously known as blastz) was developed at > netXenTro3 | netXenTro3 | TARGET=_blank>Pennsylvania State University by > netXenTro3 | Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from > netXenTro3 | Ross Hardison.

    22675c22762 < netXenTro3 | RepeatMasker --- > netXenTro3 | RepeatMasker 23912c23999 < rmsk | RepeatMasker --- > rmsk | RepeatMasker 23993,23994c24080,24081 < rmsk | < rmsk | https://www.repeatmasker.org/. 1996-2010. --- > rmsk | > rmsk | http://www.repeatmasker.org. 1996-2010. 24070c24157 < sibTxGraph | SIBsim4, keeping --- > sibTxGraph | SIBsim4, keeping 24439c24526 < stsMapMouseNew | TARGET=_blank>WICGR Mouse Genetic Map, stsMapMouseNew | TARGET=_blank>WICGR Mouse Genetic Map, Mouse Genome Informatics (MGI) --- > stsMapMouseNew |
  • Mouse Genome Informatics (MGI) 24509c24596 < targetScanS | and the TargetScan --- > targetScanS | and the TargetScan 24520c24607 < targetScanS | TargetScan website. --- > targetScanS | TargetScan website. 24568c24655 < transcriptome | using ESTScan.

    --- > transcriptome | using ESTScan.

    24590c24677 < transcriptome | \tare aligned to the genome with transcriptome | \tare aligned to the genome with VISTA Enhancer Browser --- > vistaEnhancersBb | can be found on the VISTA Enhancer Browser 24886c24973 < vistaEnhancersBb |
  • Pennacchio et al., vistaEnhancersBb |
  • Pennacchio et al., Nobrega et al., vistaEnhancersBb |
  • Nobrega et al., Pennacchio et al., vistaEnhancersBb |
  • Pennacchio et al., Visel et al., vistaEnhancersBb |
  • Visel et al., Visel et al., vistaEnhancersBb |
  • Visel et al., Visel et al., vistaEnhancersBb |
  • Visel et al., Visel et al., vistaEnhancersBb |
  • Visel et al., The Alignments (BAM file) view shows reads aligned to the genome. Alignments are colored by cell type. See the Bowtie Manual (Langmead et al., 2009) --- > wgEncodeCaltechRnaSeq |
    The Alignments (BAM file) view shows reads aligned to the genome. Alignments are colored by cell type. See the Bowtie Manual (Langmead et al., 2009) 25242c25329 < wgEncodeCaltechRnaSeq | and without the random chromosomes in all cases) using TopHat (version 1.3.1). TopHat was used with default settings with the exception of specifying an empirically determined mean inner-mate distance and supplying known ENSEMBL version 63 splice junctions.

    --- > wgEncodeCaltechRnaSeq | and without the random chromosomes in all cases) using TopHat (version 1.3.1). TopHat was used with default settings with the exception of specifying an empirically determined mean inner-mate distance and supplying known ENSEMBL version 63 splice junctions.

    25639c25726 < wgEncodeCshlLongRnaSeq | bases may mismatch. Every mapped read is displayed, i.e. uncollapsed. The alignment file follows the standard SAM format of Bowtie output. See the Bowtie Manual for more information about the SAM Bowtie output (including other tags) and the SAM Format Specification for more information on the SAM/BAM file format. --- > wgEncodeCshlLongRnaSeq | bases may mismatch. Every mapped read is displayed, i.e. uncollapsed. The alignment file follows the standard SAM format of Bowtie output. See the Bowtie Manual for more information about the SAM Bowtie output (including other tags) and the SAM Format Specification for more information on the SAM/BAM file format. 26554c26641 < wgEncodeLicrHistone | or --- > wgEncodeLicrHistone | or 27586c27673 < wgEncodeLicrTfbs | Bowtie --- > wgEncodeLicrTfbs | Bowtie 27976c28063 < wgEncodeMapability | By using the GEM mapper aligner, --- > wgEncodeMapability | By using the GEM mapper aligner, 28226c28313 < wgEncodePsuDnase | Bowtie (Langmead et al., 2009). --- > wgEncodePsuDnase | Bowtie (Langmead et al., 2009). 28229c28316 < wgEncodePsuDnase | SAMtools. --- > wgEncodePsuDnase | SAMtools. 29676c29763 < wgEncodeSydhRnaSeq | bases may mismatch. The alignment file follows the standard SAM format of Bowtie output. See the Bowtie Manual for more information about the SAM Bowtie output and the SAM Format Specification for more information on the SAM/BAM file format. --- > wgEncodeSydhRnaSeq | bases may mismatch. The alignment file follows the standard SAM format of Bowtie output. See the Bowtie Manual for more information about the SAM Bowtie output and the SAM Format Specification for more information on the SAM/BAM file format. 30606c30693 < wgEncodeUwDnase | Bowtie. --- > wgEncodeUwDnase | Bowtie.