--------------------------------------------------------------- hg19.trackDb.html : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 2897,2901d2896 < bayesDel | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < bayesDel | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < bayesDel |
< bayesDel | < bayesDel |2917,2919d2911 < bayesDel | Interpretation: The authors defined the thresholds <0.140 for a variant < bayesDel | to be benign, and > 0.730 for pathogenic with 95% confidence.
< bayesDel |2929,2931d2920 < bayesDel | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 33683,33687d33671 < maxAFmutA | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < maxAFmutA | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < maxAFmutA |
< maxAFmutA | < maxAFmutA |33703,33705d33686 < maxAFmutA | Interpretation: The authors defined the thresholds <0.140 for a variant < maxAFmutA | to be benign, and > 0.730 for pathogenic with 95% confidence.
< maxAFmutA |33715,33717d33695 < maxAFmutA | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 33886,33890d33863 < MaxAFmutC | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < MaxAFmutC | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < MaxAFmutC |
< MaxAFmutC | < MaxAFmutC |33906,33908d33878 < MaxAFmutC | Interpretation: The authors defined the thresholds <0.140 for a variant < MaxAFmutC | to be benign, and > 0.730 for pathogenic with 95% confidence.
< MaxAFmutC |33918,33920d33887 < MaxAFmutC | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 34089,34093d34055 < MaxAFmutG | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < MaxAFmutG | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < MaxAFmutG |
< MaxAFmutG | < MaxAFmutG |34109,34111d34070 < MaxAFmutG | Interpretation: The authors defined the thresholds <0.140 for a variant < MaxAFmutG | to be benign, and > 0.730 for pathogenic with 95% confidence.
< MaxAFmutG |34121,34123d34079 < MaxAFmutG | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 34292,34296d34247 < MaxAFmutT | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < MaxAFmutT | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < MaxAFmutT |
< MaxAFmutT | < MaxAFmutT |34312,34314d34262 < MaxAFmutT | Interpretation: The authors defined the thresholds <0.140 for a variant < MaxAFmutT | to be benign, and > 0.730 for pathogenic with 95% confidence.
< MaxAFmutT |34324,34326d34271 < MaxAFmutT | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 40348,40352d40292 < noAFmutA | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < noAFmutA | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < noAFmutA |
< noAFmutA | < noAFmutA |40368,40370d40307 < noAFmutA | Interpretation: The authors defined the thresholds <0.140 for a variant < noAFmutA | to be benign, and > 0.730 for pathogenic with 95% confidence.
< noAFmutA |40380,40382d40316 < noAFmutA | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 40551,40555d40484 < noAFmutC | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < noAFmutC | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < noAFmutC |
< noAFmutC | < noAFmutC |40571,40573d40499 < noAFmutC | Interpretation: The authors defined the thresholds <0.140 for a variant < noAFmutC | to be benign, and > 0.730 for pathogenic with 95% confidence.
< noAFmutC |40583,40585d40508 < noAFmutC | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 40754,40758d40676 < noAFmutG | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < noAFmutG | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < noAFmutG |
< noAFmutG | < noAFmutG |40774,40776d40691 < noAFmutG | Interpretation: The authors defined the thresholds <0.140 for a variant < noAFmutG | to be benign, and > 0.730 for pathogenic with 95% confidence.
< noAFmutG |40786,40788d40700 < noAFmutG | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 40957,40961d40868 < noAFmutT | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < noAFmutT | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < noAFmutT |
< noAFmutT | < noAFmutT |40977,40979d40883 < noAFmutT | Interpretation: The authors defined the thresholds <0.140 for a variant < noAFmutT | to be benign, and > 0.730 for pathogenic with 95% confidence.
< noAFmutT |40989,40991d40892 < noAFmutT | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al. 45634,45638d45534 < predictionScoresSuper | Interpretation: The authors define that at an M-CAP score > 0.025, 5% of < predictionScoresSuper | pathogenic variants are misclassified as benign. 0.025 is the recommended cutoff. < predictionScoresSuper |
< predictionScoresSuper | < predictionScoresSuper |45654,45656d45549 < predictionScoresSuper | Interpretation: The authors defined the thresholds <0.140 for a variant < predictionScoresSuper | to be benign, and > 0.730 for pathogenic with 95% confidence.
< predictionScoresSuper |45666,45668d45558 < predictionScoresSuper | MutScore was seen to outperform other scores by papers Porretta et al and Brock et al.