--------------------------------------------------------------- canFam4.trackDb.tableName : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > HLTOGAannotvHg38v1 > altAllele > augustusGene > cartVersion > chainCanFam3 > chainHg38 > chainMm10 > chainNeoSch1 > chainNetCanFam3 > chainNetCanFam3Viewchain > chainNetCanFam3Viewnet > chainNetHg38 > chainNetHg38Viewchain > chainNetHg38Viewnet > chainNetMm10 > chainNetMm10Viewchain > chainNetMm10Viewnet > chainNetNeoSch1 > chainNetNeoSch1Viewchain > chainNetNeoSch1Viewnet > cpgIslandExt > cpgIslandExtUnmasked > cpgIslandSuper > cytoBandIdeo > est > gap > gc5BaseBw > genscan > gold > intronEst > miRNA > microsat > mrna > ncbiRefSeq > ncbiRefSeqCurated > ncbiRefSeqGenomicDiff > ncbiRefSeqOther > ncbiRefSeqPredicted > ncbiRefSeqPsl > nestedRepeats > netCanFam3 > netHg38 > netMm10 > netNeoSch1 > refGene > refSeqComposite > rmsk > simpleRepeat > structVar > ucscToINSDC > uuGene > windowmaskerSdust > xenoMrna > xenoRefGene --------------------------------------------------------------- canFam4.trackDb.shortLabel : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AUGUSTUS > Assembly > Chain > Chain > Chain > Chain > Chromosome Band (Ideogram) > CpG Islands > CpG Islands > Dog Chain > Dog Chain/Net > Dog ESTs > Dog Net > Dog mRNAs > GC Percent > Gap > Genscan Genes > Hawaiian monk seal Chain > Hawaiian monk seal Chain/Net > Hawaiian monk seal Net > Human Chain > Human Chain/Net > Human Net > INSDC > Interrupted Rpts > Microsatellite > Mouse Chain > Mouse Chain/Net > Mouse Net > NCBI RefSeq > Net > Net > Net > Net > Other RefSeq > Other mRNAs > RefSeq Alignments > RefSeq All > RefSeq Curated > RefSeq Diffs > RefSeq Other > RefSeq Predicted > RepeatMasker > SNP and indels > Simple Repeats > Spliced ESTs > Struct Var > TOGA vs. hg38 > UCSC RefSeq > UU GSD1.0 genes > Unmasked CpG > WM + SDust > cartVersion > miRNA --------------------------------------------------------------- canFam4.trackDb.type : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > bed 12 + > bed 12 . > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 + > bed 3 + > bed 4 > bed 4 > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bed 4 . > bed 9 + > bigBed 12 > bigBed 12 + > bigBed 9 + > bigWig 0 100 > cartVersion > chain canFam3 > chain hg38 > chain mm10 > chain neoSch1 > genePred > genePred > genePred > genePred > genePred > genePred genscanPep > genePred refPep refMrna > genePred xenoRefPep xenoRefMrna > netAlign canFam3 chainCanFam3 > netAlign hg38 chainHg38 > netAlign mm10 chainMm10 > netAlign neoSch1 chainNeoSch1 > psl > psl . > psl est > psl est > psl xeno > rmsk > vcfTabix --------------------------------------------------------------- canFam4.trackDb.longLabel : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AUGUSTUS ab initio gene predictions v3.1 > Accession at INSDC - International Nucleotide Sequence Database Collaboration > Assembly from Fragments > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands on All Sequence (Islands < 300 Bases are Light Green) > Differences between NCBI RefSeq Transcripts and the Reference Genome > Dog (Sep. 2011 (Broad CanFam3.1/canFam3)) Alignment Net > Dog (Sep. 2011 (Broad CanFam3.1/canFam3)) Chained Alignments > Dog (Sep. 2011 (Broad CanFam3.1/canFam3)), Chain and Net Alignments > Dog (Sep. 2011 (Broad CanFam3.1/canFam3)), Chain and Net Alignments > Dog (Sep. 2011 (Broad CanFam3.1/canFam3)), Chain and Net Alignments > Dog ESTs Including Unspliced > Dog ESTs That Have Been Spliced > Dog mRNAs from GenBank > Fragments of Interrupted Repeats Joined by RepeatMasker ID > GC Percent in 5-Base Windows > Gap Locations > Genomic Intervals Masked by WindowMasker + SDust > Genscan Gene Predictions > Hawaiian monk seal (Jun. 2017 (ASM220157v1/neoSch1)) Alignment net > Hawaiian monk seal (Jun. 2017 (ASM220157v1/neoSch1)) Chained Alignments > Hawaiian monk seal (Jun. 2017 (ASM220157v1/neoSch1)), Chain and Net Alignments > Hawaiian monk seal (Jun. 2017 (ASM220157v1/neoSch1)), Chain and Net Alignments > Hawaiian monk seal (Jun. 2017 (ASM220157v1/neoSch1)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)) Alignment net > Human (Dec. 2013 (GRCh38/hg38)) Chained Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Ideogram for Orientation > Microsatellites - Di-nucleotide and Tri-nucleotide Repeats > Mouse (Dec. 2011 (GRCm38/mm10)) Alignment Net > Mouse (Dec. 2011 (GRCm38/mm10)) Chained Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > NCBI RefSeq Other Annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*) > NCBI RefSeq genes, curated and predicted (NM_*, XM_*, NR_*, XR_*, NP_*, YP_*) > NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*) > NCBI RefSeq genes, predicted subset (XM_* or XR_*) > Non-Dog RefSeq Genes > Non-Dog mRNAs from GenBank > RefSeq Alignments of RNAs > RefSeq genes from NCBI > Repeating Elements by RepeatMasker > SNP and indels > Simple Tandem Repeats by TRF > Structural variations > TOGA annotations using human/hg38 as reference > UCSC annotations of RefSeq RNAs (NM_* and NR_*) > Uppsala University GSD1.0 gene annotations > cartVersion > miRNA GSD1.0 miRDeep2 --------------------------------------------------------------- canFam4.trackDb.visibility : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 --------------------------------------------------------------- canFam4.trackDb.priority : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 12 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 240 > 240 > 240 > 3 > 370.3 > 370.3 > 370.3 > 4 > 402.43 > 402.43 > 402.43 > 470.3 > 470.3 > 470.3 > 5 > 6 > 7 --------------------------------------------------------------- canFam4.trackDb.colorR : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 12 > 12 > 12 > 12 > 12 > 12 > 12 > 150 > 153 > 170 > 178 > 32 --------------------------------------------------------------- canFam4.trackDb.colorG : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 100 > 100 > 100 > 100 > 100 > 105 > 12 > 12 > 12 > 12 > 12 > 12 > 32 > 34 --------------------------------------------------------------- canFam4.trackDb.colorB : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 120 > 120 > 120 > 120 > 120 > 120 > 153 > 30 > 32 > 34 --------------------------------------------------------------- canFam4.trackDb.altColorR : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 133 > 133 > 133 > 133 > 133 > 133 > 133 > 143 > 204 > 212 > 216 > 230 --------------------------------------------------------------- canFam4.trackDb.altColorG : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 133 > 133 > 133 > 133 > 133 > 133 > 143 > 144 > 170 > 177 > 180 > 228 > 228 > 228 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 --------------------------------------------------------------- canFam4.trackDb.altColorB : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 143 > 144 > 187 > 187 > 187 > 187 > 187 > 187 > 204 > 40 --------------------------------------------------------------- canFam4.trackDb.useScore : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- canFam4.trackDb.private : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- canFam4.trackDb.restrictCount : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- canFam4.trackDb.restrictList : Differences exist between hgwbeta and hgw2 2,16c2,54 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > --------------------------------------------------------------- canFam4.trackDb.url : Differences exist between hgwbeta and hgw2 2,16c2,54 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > cartVersion > https://www.ncbi.nlm.nih.gov/nuccore/$$ --------------------------------------------------------------- canFam4.trackDb.grp : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > cartVersion > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > map > map > map > map > map > regulation > regulation > regulation > rna > rna > rna > rna > rna > varRep > varRep > varRep > varRep > varRep > varRep > varRep --------------------------------------------------------------- canFam4.trackDb.canPack : Differences exist between hgwbeta and hgw2 1,16c1,54 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- canFam4.trackDb.settings : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 421c421 < ncbiRefSeqOther | urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/612091" HGNC="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="https://www.informatics.jax.org//marker/$$" --- > ncbiRefSeqOther | urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/612091" HGNC="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="http://www.informatics.jax.org/marker/$$" 504a505 > refGene | dataVersion 520c521 < refSeqComposite | dbPrefixUrls hg="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" dm="http://flybase.org/reports/$$" ce="http://www.wormbase.org/db/gene/gene?name=$$" rn="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" sacCer="https://www.yeastgenome.org/locus/$$" danRer="https://zfin.org/$$" mm="https://www.informatics.jax.org//marker/$$" xenTro="https://www.xenbase.org/gene/showgene.do?method=display&geneId=$$" --- > refSeqComposite | dbPrefixUrls hg="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" dm="http://flybase.org/reports/$$" ce="http://www.wormbase.org/db/gene/gene?name=$$" rn="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" sacCer="https://www.yeastgenome.org/locus/$$" danRer="https://zfin.org/$$" mm="http://www.informatics.jax.org/marker/$$" xenTro="https://www.xenbase.org/gene/showgene.do?method=display&geneId=$$" not real time for settings for RR results. Differences exist in html field