--------------------------------------------------------------- canFam5.trackDb.tableName : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > HLTOGAannotvHg38v1 > augustusGene > cartVersion > chainHg38 > chainMm10 > chainMm39 > chainNetHg38 > chainNetHg38Viewchain > chainNetHg38Viewnet > chainNetMm10 > chainNetMm10Viewchain > chainNetMm10Viewnet > chainNetMm39 > chainNetMm39Viewchain > chainNetMm39Viewnet > cpgIslandExt > cpgIslandExtUnmasked > cpgIslandSuper > cytoBandIdeo > ensGene > est > gap > gc5BaseBw > genscan > gold > intronEst > microsat > mrna > nestedRepeats > netHg38 > netMm10 > netMm39 > refGene > rmsk > simpleRepeat > ucscToINSDC > unipAliSwissprot > unipAliTrembl > unipChain > unipConflict > unipDisulfBond > unipDomain > unipInterest > unipLocCytopl > unipLocExtra > unipLocSignal > unipLocTransMemb > unipModif > unipMut > unipOther > unipRepeat > unipStruct > uniprot > windowmaskerSdust > xenoMrna > xenoRefGene --------------------------------------------------------------- canFam5.trackDb.shortLabel : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AA Modifications > AUGUSTUS > Assembly > Chain > Chain > Chain > Chains > Chromosome Band (Ideogram) > CpG Islands > CpG Islands > Cytoplasmic > Disulf. Bonds > Dog ESTs > Dog mRNAs > Domains > Ensembl Genes > Extracellular > GC Percent > Gap > Genscan Genes > Human Chain > Human Chain/Net > Human Net > INSDC > Interest > Interrupted Rpts > Microsatellite > Mouse Chain > Mouse Chain > Mouse Chain/Net > Mouse Net > Mouse Net > Mutations > Net > Net > Net > Other Annot. > Other RefSeq > Other mRNAs > RefSeq Genes > RepeatMasker > Repeats > Seq. Conflicts > Signal Peptide > Simple Repeats > Spliced ESTs > Structure > SwissProt Aln. > TOGA vs. hg38 > TrEMBL Aln. > Transmembrane > UniProt > Unmasked CpG > WM + SDust > cartVersion > mm10 ChainNet --------------------------------------------------------------- canFam5.trackDb.type : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > bed 12 + > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 + > bed 3 + > bed 4 > bed 4 > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bigBed 12 > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigBed 12 + > bigPsl > bigPsl > bigWig 0 100 > cartVersion > chain hg38 > chain mm10 > chain mm39 > genePred > genePred ensPep > genePred genscanPep > genePred refPep refMrna > genePred xenoRefPep xenoRefMrna > netAlign hg38 chainHg38 > netAlign mm10 chainMm10 > netAlign mm39 chainMm39 > psl . > psl est > psl est > psl xeno > rmsk --------------------------------------------------------------- canFam5.trackDb.longLabel : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AUGUSTUS ab initio gene predictions v3.1 > Accession at INSDC - International Nucleotide Sequence Database Collaboration > Assembly from Fragments > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands on All Sequence (Islands < 300 Bases are Light Green) > Dog ESTs Including Unspliced > Dog ESTs That Have Been Spliced > Dog mRNAs from GenBank > Ensembl Genes > Fragments of Interrupted Repeats Joined by RepeatMasker ID > GC Percent in 5-Base Windows > Gap Locations > Genomic Intervals Masked by WindowMasker + SDust > Genscan Gene Predictions > Human (Dec. 2013 (GRCh38/hg38)) Alignment net > Human (Dec. 2013 (GRCh38/hg38)) Chained Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Ideogram for Orientation > Microsatellites - Di-nucleotide and Tri-nucleotide Repeats > Mouse (Dec. 2011 (GRCm38/mm10)) Alignment Net > Mouse (Dec. 2011 (GRCm38/mm10)) Chained Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Jun. 2020 (GRCm39/mm39)) Alignment Net > Mouse (Jun. 2020 (GRCm39/mm39)) Chained Alignments > Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments > Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments > Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments > Non-Dog RefSeq Genes > Non-Dog mRNAs from GenBank > RefSeq Genes > Repeating Elements by RepeatMasker > Simple Tandem Repeats by TRF > TOGA annotations using human/hg38 as reference > UCSC alignment of SwissProt proteins to genome (dark blue: main isoform, light blue: alternative isoforms) > UCSC alignment of TrEMBL proteins to genome > UniProt Amino Acid Modifications > UniProt Amino Acid Mutations > UniProt Cytoplasmic Domains > UniProt Disulfide Bonds > UniProt Domains > UniProt Extracellular Domain > UniProt Mature Protein Products (Polypeptide Chains) > UniProt Other Annotations > UniProt Protein Primary/Secondary Structure Annotations > UniProt Regions of Interest > UniProt Repeats > UniProt Sequence Conflicts > UniProt Signal Peptides > UniProt SwissProt/TrEMBL Protein Annotations > UniProt Transmembrane Domains > cartVersion --------------------------------------------------------------- canFam5.trackDb.visibility : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 2 > 2 > 2 > 2 > 2 > 2 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 --------------------------------------------------------------- canFam5.trackDb.priority : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 10 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 11 > 11 > 12 > 13 > 2 > 2 > 2 > 2 > 2 > 2 > 3 > 370.3 > 370.3 > 370.3 > 370.3 > 370.3 > 370.3 > 4 > 4 > 470.3 > 470.3 > 470.3 > 5 > 6 > 7 > 8 > 8 > 9 --------------------------------------------------------------- canFam5.trackDb.colorR : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 12 > 12 > 12 > 150 > 150 > 170 > 255 > 255 --------------------------------------------------------------- canFam5.trackDb.colorG : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 100 > 100 > 100 > 100 > 100 > 105 > 12 > 12 > 150 > 150 > 150 --------------------------------------------------------------- canFam5.trackDb.colorB : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 120 > 120 > 150 > 255 > 30 --------------------------------------------------------------- canFam5.trackDb.altColorR : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 133 > 133 > 133 > 202 > 212 > 230 > 255 > 255 --------------------------------------------------------------- canFam5.trackDb.altColorG : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 133 > 133 > 170 > 177 > 180 > 202 > 202 > 202 > 228 > 228 > 228 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 --------------------------------------------------------------- canFam5.trackDb.altColorB : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 187 > 187 > 202 > 255 > 40 --------------------------------------------------------------- canFam5.trackDb.useScore : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- canFam5.trackDb.private : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- canFam5.trackDb.restrictCount : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- canFam5.trackDb.restrictList : Differences exist between hgwbeta and hgw2 2,16c2,56 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > --------------------------------------------------------------- canFam5.trackDb.url : Differences exist between hgwbeta and hgw2 2,16c2,56 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > cartVersion > https://www.ncbi.nlm.nih.gov/nuccore/$$ --------------------------------------------------------------- canFam5.trackDb.grp : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > cartVersion > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > map > map > map > map > map > regulation > regulation > regulation > rna > rna > rna > rna > varRep > varRep > varRep > varRep > varRep --------------------------------------------------------------- canFam5.trackDb.canPack : Differences exist between hgwbeta and hgw2 1,16c1,56 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- canFam5.trackDb.settings : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 187,206d186 < crisprAllTargets | settings < crisprAllTargets | bigDataUrl /gbdb/canFam5/crisprAll/crispr.bb < crisprAllTargets | denseCoverage 0 < crisprAllTargets | detailsTabUrls _offset=/gbdb/$db/crisprAll/crisprDetails.tab < crisprAllTargets | group genes < crisprAllTargets | html crisprAll < crisprAllTargets | itemRgb on < crisprAllTargets | longLabel CRISPR/Cas9 -NGG Targets, whole genome < crisprAllTargets | mouseOverField _mouseOver < crisprAllTargets | noGenomeReason This track is too big for whole-genome Table Browser access, it would lead to a timeout in your internet browser. Small regional queries can work, but large regions, such as entire chromosomes, will fail. Please see the CRISPR Track documentation, the section "Data Access", for bulk-download options and remote access via the bedToBigBed tool. API access should always work. Contact us if you encounter difficulties with accessing the data. < crisprAllTargets | scoreFilterMax 100 < crisprAllTargets | scoreLabel MIT Guide Specificity Score < crisprAllTargets | shortLabel CRISPR Targets < crisprAllTargets | tableBrowser tbNoGenome < crisprAllTargets | track crisprAllTargets < crisprAllTargets | type bigBed 9 + < crisprAllTargets | url http://crispor.gi.ucsc.edu/crispor.py?org=$D&pos=$S:${&pam=NGG < crisprAllTargets | urlLabel Click here to show this guide on Crispor.org, with expression oligos, validation primers and more < crisprAllTargets | visibility hide < crisprAllTargets | 427c407 < unipAliSwissprot | mouseOver UniProt record accession: $acc
Protein Name: $protFullNames
UniProt status: $status
--- > unipAliSwissprot | mouseOverField protFullNames 449c429 < unipAliTrembl | mouseOver UniProt record accession: $acc
Protein Name: $protFullNames
UniProt status: $status
--- > unipAliTrembl | mouseOverField protFullNames 465d444 < unipChain | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 478d456 < unipConflict | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 491d468 < unipDisulfBond | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 503d479 < unipDomain | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 517d492 < unipInterest | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status
531d505 < unipLocCytopl | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 545d518 < unipLocExtra | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status
559d531 < unipLocSignal | mouseOver UniProt record: $uniProtId
Position: $position
UniProt record name: $status
573d544 < unipLocTransMemb | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 585d555 < unipModif | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 597d566 < unipMut | mouseOver UniProt record: $uniProtId
UniProt variant: $variationId
UniProt status: $status 610d578 < unipOther | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 623d590 < unipRepeat | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status 640a608 > uniprot | mouseOverField comments 652d619 < unipStruct | mouseOver UniProt record: $uniProtId
Position: $position
UniProt status: $status not real time for settings for RR results. Differences exist in html field