--------------------------------------------------------------- panTro5.trackDb.tableName : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > augustusGene > cartVersion > chainGorGor5 > chainHg38 > chainMm10 > chainNetGorGor5 > chainNetGorGor5Viewchain > chainNetGorGor5Viewnet > chainNetHg38 > chainNetHg38Viewchain > chainNetHg38Viewnet > chainNetMm10 > chainNetMm10Viewchain > chainNetMm10Viewnet > chainNetRn6 > chainNetRn6Viewchain > chainNetRn6Viewnet > chainRn6 > cpgIslandExt > cpgIslandExtUnmasked > cpgIslandSuper > cytoBandIdeo > ensGene > est > evaSnp4 > evaSnp5 > evaSnp6 > evaSnp7 > evaSnpContainer > gap > gc5BaseBw > genscan > gold > intronEst > microsat > mrna > ncbiRefSeq > ncbiRefSeqCurated > ncbiRefSeqGenomicDiff > ncbiRefSeqOther > ncbiRefSeqPredicted > ncbiRefSeqPsl > nestedRepeats > netGorGor5 > netHg38 > netMm10 > netRn6 > refGene > refSeqComposite > rmsk > simpleRepeat > transMapEnsemblV5 > transMapEstV5 > transMapRefSeqV5 > transMapRnaV5 > transMapV5 > ucscToINSDC > ucscToRefSeq > windowmaskerSdust > xenoMrna > xenoRefGene --------------------------------------------------------------- panTro5.trackDb.shortLabel : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AUGUSTUS > Assembly > Chain > Chain > Chain > Chain > Chimp ESTs > Chimp mRNAs > Chromosome Band (Ideogram) > CpG Islands > CpG Islands > EVA SNP > EVA SNP Release 4 > EVA SNP Release 5 > EVA SNP Release 6 > EVA SNP Release 7 > Ensembl Genes > GC Percent > Gap > Genscan Genes > Gorilla Chain > Gorilla Chain/Net > Gorilla Net > Human Chain > Human Chain/Net > Human Net > INSDC > Interrupted Rpts > Microsatellite > Mouse Chain > Mouse Chain/Net > Mouse Net > NCBI RefSeq > Net > Net > Net > Net > Other RefSeq > Other mRNAs > Rat Chain > Rat Chain/Net > Rat Net > RefSeq Acc > RefSeq Alignments > RefSeq All > RefSeq Curated > RefSeq Diffs > RefSeq Other > RefSeq Predicted > RepeatMasker > Simple Repeats > Spliced ESTs > TransMap ESTs > TransMap Ensembl > TransMap RNA > TransMap RefGene > TransMap V5 > UCSC RefSeq > Unmasked CpG > WM + SDust > cartVersion --------------------------------------------------------------- panTro5.trackDb.type : Differences exist between hgwbeta and hgw2 2,16c2,61 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > bed 12 + > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 > bed 3 + > bed 3 + > bed 4 > bed 4 > bed 4 > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bed 4 + > bigBed 12 + > bigBed 9 + > bigBed 9 + > bigBed 9 + > bigBed 9 + > bigBed 9 + > bigBed 9 + > bigPsl > bigPsl > bigPsl > bigPsl > bigWig 0 100 > cartVersion > chain gorGor5 > chain hg38 > chain mm10 > chain rn6 > genePred > genePred > genePred > genePred > genePred > genePred ensPep > genePred genscanPep > genePred refPep refMrna > genePred xenoRefPep xenoRefMrna > netAlign gorGor5 chainGorGor5 > netAlign hg38 chainHg38 > netAlign mm10 chainMm10 > netAlign rn6 chainRn6 > psl > psl . > psl est > psl est > psl xeno > rmsk --------------------------------------------------------------- panTro5.trackDb.longLabel : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > AUGUSTUS ab initio gene predictions v3.1 > Accession at INSDC - International Nucleotide Sequence Database Collaboration > Assembly from Fragments > Chimp ESTs Including Unspliced > Chimp ESTs That Have Been Spliced > Chimp mRNAs from GenBank > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands (Islands < 300 Bases are Light Green) > CpG Islands on All Sequence (Islands < 300 Bases are Light Green) > Differences between NCBI RefSeq Transcripts and the Reference Genome > Ensembl Genes > Fragments of Interrupted Repeats Joined by RepeatMasker ID > GC Percent in 5-Base Windows > Gap Locations > Genomic Intervals Masked by WindowMasker + SDust > Genscan Gene Predictions > Gorilla (Mar. 2016 (GSMRT3/gorGor5)) Alignment net > Gorilla (Mar. 2016 (GSMRT3/gorGor5)) Chained Alignments > Gorilla (Mar. 2016 (GSMRT3/gorGor5)), Chain and Net Alignments > Gorilla (Mar. 2016 (GSMRT3/gorGor5)), Chain and Net Alignments > Gorilla (Mar. 2016 (GSMRT3/gorGor5)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)) Alignment net > Human (Dec. 2013 (GRCh38/hg38)) Chained Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments > Ideogram for Orientation > Microsatellites - Di-nucleotide and Tri-nucleotide Repeats > Mouse (Dec. 2011 (GRCm38/mm10)) Alignment Net > Mouse (Dec. 2011 (GRCm38/mm10)) Chained Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments > NCBI RefSeq Other Annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*) > NCBI RefSeq genes, curated and predicted (NM_*, XM_*, NR_*, XR_*, NP_*, YP_*) > NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*) > NCBI RefSeq genes, predicted subset (XM_* or XR_*) > Non-Chimp RefSeq Genes > Non-Chimp mRNAs from GenBank > Rat (Jul. 2014 (RGSC 6.0/rn6)) Alignment Net > Rat (Jul. 2014 (RGSC 6.0/rn6)) Chained Alignments > Rat (Jul. 2014 (RGSC 6.0/rn6)), Chain and Net Alignments > Rat (Jul. 2014 (RGSC 6.0/rn6)), Chain and Net Alignments > Rat (Jul. 2014 (RGSC 6.0/rn6)), Chain and Net Alignments > RefSeq Accession > RefSeq Alignments of RNAs > RefSeq genes from NCBI > Repeating Elements by RepeatMasker > Short Genetic Variants from European Variant Archive > Short Genetic Variants from European Variant Archive Release 4 > Short Genetic Variants from European Variant Archive Release 5 > Short Genetic Variants from European Variant Archive Release 6 > Short Genetic Variants from European Variant Archive Release 7 > Simple Tandem Repeats by TRF > TransMap Alignments Version 5 > TransMap EST Mappings Version 5 > TransMap Ensembl and GENCODE Mappings Version 5 > TransMap GenBank RNA Mappings Version 5 > TransMap RefSeq Gene Mappings Version 5 > UCSC annotations of RefSeq RNAs (NM_* and NR_*) > cartVersion --------------------------------------------------------------- panTro5.trackDb.visibility : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 > 3 --------------------------------------------------------------- panTro5.trackDb.priority : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 10.001 > 10.003 > 10.004 > 10.005 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 2 > 209 > 209 > 209 > 220.3 > 220.3 > 220.3 > 3 > 3 > 370.3 > 370.3 > 370.3 > 4 > 4 > 498 > 498 > 498 > 5 > 6 > 7 --------------------------------------------------------------- panTro5.trackDb.colorR : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 12 > 12 > 12 > 12 > 12 > 12 > 150 > 150 > 170 > 32 --------------------------------------------------------------- panTro5.trackDb.colorG : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 105 > 12 > 12 > 12 > 12 > 12 > 32 --------------------------------------------------------------- panTro5.trackDb.colorB : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 120 > 120 > 120 > 120 > 120 > 30 > 32 --------------------------------------------------------------- panTro5.trackDb.altColorR : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 100 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 133 > 133 > 133 > 133 > 133 > 133 > 143 > 202 > 212 > 230 --------------------------------------------------------------- panTro5.trackDb.altColorG : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 133 > 133 > 133 > 133 > 133 > 143 > 170 > 177 > 177 > 177 > 177 > 177 > 180 > 228 > 228 > 228 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 > 50 --------------------------------------------------------------- panTro5.trackDb.altColorB : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 127 > 128 > 128 > 128 > 128 > 143 > 187 > 187 > 187 > 187 > 187 > 40 --------------------------------------------------------------- panTro5.trackDb.useScore : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- panTro5.trackDb.private : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- panTro5.trackDb.restrictCount : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 --------------------------------------------------------------- panTro5.trackDb.restrictList : Differences exist between hgwbeta and hgw2 2,16c2,61 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > --------------------------------------------------------------- panTro5.trackDb.url : Differences exist between hgwbeta and hgw2 2,16c2,61 < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > cartVersion > https://www.ebi.ac.uk/eva/?variant&accessionID=$$ > https://www.ebi.ac.uk/eva/?variant&accessionID=$$ > https://www.ebi.ac.uk/eva/?variant&accessionID=$$ > https://www.ebi.ac.uk/eva/?variant&accessionID=$$ > https://www.ncbi.nlm.nih.gov/nuccore/$$ > https://www.ncbi.nlm.nih.gov/nuccore/$$ --------------------------------------------------------------- panTro5.trackDb.grp : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > cartVersion > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > compGeno > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > genes > map > map > map > map > map > map > regulation > regulation > regulation > rna > rna > rna > rna > varRep > varRep > varRep > varRep > varRep > varRep > varRep > varRep > varRep > varRep --------------------------------------------------------------- panTro5.trackDb.canPack : Differences exist between hgwbeta and hgw2 1,16c1,61 < < < < < < < <

< < < <

Mysql error during sqlTableExists(userDb) 1286: Unknown storage engine 'InnoDB' < < Very Early Error <

< --- > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 0 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 > 1 --------------------------------------------------------------- panTro5.trackDb.settings : Differences exist between hgwbeta and hgw2 (RR fields taken from public MySql server, not individual machine) 281c281 < evaSnp4 | mouseOver Ref/Alt allele(s): $ref>$alt
Var type: $ucscClass
AA change: $aaChange --- > evaSnp4 | mouseOver $ref>$alt $ucscClass $aaChange 302c302 < evaSnp5 | mouseOver Ref/Alt allele(s): $ref>$alt
Var type: $ucscClass
AA change: $aaChange --- > evaSnp5 | mouseOver $ref>$alt $ucscClass $aaChange 323c323 < evaSnp6 | mouseOver Ref/Alt allele(s): $ref>$alt
Var type: $ucscClass
AA change: $aaChange --- > evaSnp6 | mouseOver $ref>$alt $ucscClass $aaChange 344c344 < evaSnp7 | mouseOver Ref/Alt allele(s): $ref>$alt
Var type: $ucscClass
AA change: $aaChange --- > evaSnp7 | mouseOver $ref>$alt $ucscClass $aaChange 355a356 > evaSnpContainer | pennantIcon Updated red ../goldenPath/newsarch.html#061125 "Updated June 11, 2025" not real time for settings for RR results. No differences in html field