pchan: changes by commit

review to branch (2009-03-17 to 2009-03-31) v203

• comment out --wikibme; change --wiki for loading genome browser wiki track
  • src/hg/archaeStuff/scripts/archaeBrowser/Annotation.pm 1.3 - lines changed: 15, context: html, text, full: html, text
  • src/hg/archaeStuff/scripts/make-browser-2.0 1.36 - lines changed: 6, context: html, text, full: html, text
• add geobLovl0 - retrievve from Todd's Genome-info-mods (32-bit src tree)
  • src/hg/archaeStuff/data/Genome-info-mods 1.62 - lines changed: 9, context: html, text, full: html, text
• add options to retrieve data from centraldb
  • src/hg/archaeStuff/scripts/extract-genome-info 1.3 - lines changed: 179, context: html, text, full: html, text
• add altdb option for alternate centraldb
  • src/hg/archaeStuff/scripts/extract-genome-info 1.4 - lines changed: 14, context: html, text, full: html, text
• add AlignFeatures
  • src/hg/makeDb/trackDb/lowelab/trackDb.ra 1.71 - lines changed: 12, context: html, text, full: html, text
• add scaffolds track
  • src/hg/makeDb/trackDb/lowelab/trackDb.ra 1.72 - lines changed: 9, context: html, text, full: html, text
• add support for metagenomes
  • src/hg/archaeStuff/scripts/archaeBrowser/Constant.pm 1.29 - lines changed: 13, context: html, text, full: html, text
  • src/hg/archaeStuff/scripts/archaeBrowser/GenomeInfo.pm 1.14 - lines changed: 1, context: html, text, full: html, text
  • src/hg/archaeStuff/scripts/archaeBrowser/OrganismDb.pm 1.29 - lines changed: 166, context: html, text, full: html, text
  • src/hg/archaeStuff/scripts/make-browser-2.0 1.37 - lines changed: 5, context: html, text, full: html, text
• create genome info file for metagenomes
  • src/hg/archaeStuff/data/Genome-info-meta 1.1 - lines changed: 75, context: html, text, full: html, text
• add LLT and scaffold lists
  • src/hg/makeDb/trackDb/lowelab/description-template.html 1.9 - lines changed: 3, context: html, text, full: html, text
• change joseph's coat org name and multiz config
  • src/hg/archaeStuff/data/Genome-info-meta 1.2 - lines changed: 6, context: html, text, full: html, text