mikep: changes by commit

branch to review (2009-04-14 to 2009-04-21) v204

• updated message about technologies
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRikenCage.html 1.4 - lines changed: 4, context: html, text, full: html, text
• fix up contact
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRikenCage.html 1.5 - lines changed: 3, context: html, text, full: html, text
• updated from Piero
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRikenCage.html 1.6 - lines changed: 8, context: html, text, full: html, text
• tagAlign tables have 'sequence' column instead of 'name' column, but otherwise are BED 6 and should be interpretable like that
  • src/hg/hgc/hgc.c 1.1526 - lines changed: 8, context: html, text, full: html, text
  • src/hg/lib/hdb.c 1.401 - lines changed: 2, context: html, text, full: html, text
• need to use hgconf for beta because SQL server is on different host now
  • src/utils/qa/weeklybld/doTrackCheckRobot.csh 1.4 - lines changed: 2, context: html, text, full: html, text
• Helicos description
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.252 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeHelicosRnaSeq.html 1.1 - lines changed: 124, context: html, text, full: html, text
• fixups
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeHelicosRnaSeq.html 1.3 - lines changed: 28, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeHelicosRnaSeq.html 1.2 - lines changed: 5, context: html, text, full: html, text
• wiggle data for +/- strands
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.253 - lines changed: 41, context: html, text, full: html, text
• • src/inc/bigBed.h 1.12 - lines changed: 12, context: html, text, full: html, text
  • src/lib/bigBed.c 1.15 - lines changed: 61, context: html, text, full: html, text
• added sort option, also made changes to bigBed.h + bigBed.c
  • src/utils/bedToBigBed/bedToBigBed.c 1.4 - lines changed: 5, context: html, text, full: html, text
• removed timing messages. added 'sorted' option to speed up creation of gigabyte sized beds.
  • src/lib/bigBed.c 1.16 - lines changed: 40, context: html, text, full: html, text
• no js on hgwdownload
  • src/utils/qa/weeklybld/doZip.csh 1.8 - lines changed: 3, context: html, text, full: html, text
• v205 preview
  • src/utils/qa/weeklybld/buildEnv.csh 1.55 - lines changed: 2, context: html, text, full: html, text