genbank: changes by commit

branch to review (2009-06-23 to 2009-06-30) v209

• added dumpStack call in attempt to understand intermitent bug
  • src/hg/makeDb/genbank/src/lib/gbDefs.c 1.9 - lines changed: 4, context: html, text, full: html, text
• attempt to correct very strange corruption reading gbidx files on RR
  • src/hg/makeDb/genbank/src/lib/gbDefs.c 1.10 - lines changed: 13, context: html, text, full: html, text
• output more info when molType corruption is detected
  • src/hg/makeDb/genbank/src/lib/gbDefs.c 1.11 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/lib/gbProcessed.c 1.9 - lines changed: 11, context: html, text, full: html, text
• disabled poltergeist hack
  • src/hg/makeDb/genbank/src/lib/gbDefs.c 1.12 - lines changed: 2, context: html, text, full: html, text
• move hgsqlrr update to hgw2 to aboid poltergeist
  • src/hg/makeDb/genbank/etc/dbload 1.25 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/lib/gbCommon.pm 1.45 - lines changed: 1, context: html, text, full: html, text
• switch hgsqlrr load host to hgnfs1
  • src/hg/makeDb/genbank/etc/dbload 1.26 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgnfs1.crontab 1.6 - lines changed: 15, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/lib/gbCommon.pm 1.46 - lines changed: 1, context: html, text, full: html, text
• • src/hg/makeDb/genbank/etc/rr-dbload 1.34 - lines changed: 6, context: html, text, full: html, text
• don't try to build grepIndex on hgnfs1
  • src/hg/makeDb/genbank/src/dbload/gbDbLoadStep 1.48 - lines changed: 3, context: html, text, full: html, text
• running load on hgnfs1 requires a copy of hgsql
  • src/hg/makeDb/genbank/makefile 1.15 - lines changed: 5, context: html, text, full: html, text
• relocate grepIndex on hgnfs1
  • src/hg/makeDb/genbank/etc/dbload 1.27 - lines changed: 9, context: html, text, full: html, text
• moved grepIndex to /gbdb/genbank/grepIndex
  • src/hg/makeDb/genbank/etc/dbload 1.28 - lines changed: 1, context: html, text, full: html, text
• allow override of grepIndex location
  • src/hg/makeDb/genbank/src/dbload/gbDbLoadStep 1.49 - lines changed: 15, context: html, text, full: html, text