kent: changes by file

review to branch (2009-08-10 to 2009-08-18) v213

• src/hg/makeDb/trackDb/README
  • 1.86 lines changed: 10, context: html, text, full: html, text
    Adding docs on bigBed/bigWig types.
• src/inc/bbiFile.h
  • 1.13 lines changed: 7, context: html, text, full: html, text
    Moving some functions from bedGraphToBigBed to library.
• src/lib/bbiRead.c
  • 1.12 lines changed: 5, context: html, text, full: html, text
    Fixing bug in coverage calcs.
• src/lib/bbiWrite.c
  • 1.4 lines changed: 72, context: html, text, full: html, text
    Moving some functions from bedGraphToBigBed to library.
• src/lib/bigBed.c
  • 1.20 lines changed: 2, context: html, text, full: html, text
    Moving some functions from bedGraphToBigBed to library.
• src/utils/bedToBigBed/bedToBigBed.c
  • 1.7 lines changed: 1, context: html, text, full: html, text
    Bumping up default itemsPerSlot for better efficiency.
• src/utils/bigBedToBed/bigBedToBed.c
  • 1.6 lines changed: 6, context: html, text, full: html, text
    Making it handle 3 column beds better.
• src/utils/bigWigToBedGraph/bigWigToBedGraph.c
  • 1.4 lines changed: 1, context: html, text, full: html, text
    Removing unused include file.