holmes: changes by file

review to branch (2009-09-22 to 2009-09-29) v216

• src/hg/archaeStuff/scripts/archaeBrowser/GenePrediction.pm
  • 1.10 lines changed: 2, context: html, text, full: html, text
    Added chmod GeneMark_heuristic.mat
  • 1.9 lines changed: 2, context: html, text, full: html, text
    Fixed for poly-n runs
• src/hg/archaeStuff/tooltip/tooltip.c
  • 1.1 lines changed: 681, context: html, text, full: html, text
    fixed blastx track
• src/hg/hgc/lowelab.c
  • 1.37 lines changed: 5, context: html, text, full: html, text
    adding description to cdd
  • 1.36 lines changed: 100, context: html, text, full: html, text
    Moved functions to loweutils.c
• src/hg/inc/cddDesc.h
  • 1.1 lines changed: 66, context: html, text, full: html, text
    adding cdd description table
• src/hg/inc/loweutils.h
  • 1.1 lines changed: 11, context: html, text, full: html, text
    moving core functions to lib
• src/hg/lib/cddDesc.as
  • 1.1 lines changed: 10, context: html, text, full: html, text
    adding cdd description table
• src/hg/lib/cddDesc.c
  • 1.1 lines changed: 150, context: html, text, full: html, text
    adding cdd description table
• src/hg/lib/cddDesc.sql
  • 1.1 lines changed: 16, context: html, text, full: html, text
    adding cdd description table
• src/hg/lib/loweutils.c
  • 1.1 lines changed: 96, context: html, text, full: html, text
    moving core functions to lib
• src/hg/lib/makefile
  • 1.396 lines changed: 1, context: html, text, full: html, text
    adding cddDesc.o
  • 1.395 lines changed: 2, context: html, text, full: html, text
    Adding loweutils.o
• src/hg/makeDb/trackDb/lowelab/trackDb.ra
  • 1.87 lines changed: 8, context: html, text, full: html, text
    Adding cdd search