holmes: changes by commit

review to branch (2009-09-22 to 2009-09-29) v216

• Adding cdd search
  • src/hg/makeDb/trackDb/lowelab/trackDb.ra 1.87 - lines changed: 8, context: html, text, full: html, text
• moving core functions to lib
  • src/hg/inc/loweutils.h 1.1 - lines changed: 11, context: html, text, full: html, text
  • src/hg/lib/loweutils.c 1.1 - lines changed: 96, context: html, text, full: html, text
• Adding loweutils.o
  • src/hg/lib/makefile 1.395 - lines changed: 2, context: html, text, full: html, text
• Moved functions to loweutils.c
  • src/hg/hgc/lowelab.c 1.36 - lines changed: 100, context: html, text, full: html, text
• fixed blastx track
  • src/hg/archaeStuff/tooltip/tooltip.c 1.1 - lines changed: 681, context: html, text, full: html, text
• adding cdd description table
  • src/hg/inc/cddDesc.h 1.1 - lines changed: 66, context: html, text, full: html, text
  • src/hg/lib/cddDesc.as 1.1 - lines changed: 10, context: html, text, full: html, text
  • src/hg/lib/cddDesc.c 1.1 - lines changed: 150, context: html, text, full: html, text
  • src/hg/lib/cddDesc.sql 1.1 - lines changed: 16, context: html, text, full: html, text
• adding cddDesc.o
  • src/hg/lib/makefile 1.396 - lines changed: 1, context: html, text, full: html, text
• adding description to cdd
  • src/hg/hgc/lowelab.c 1.37 - lines changed: 5, context: html, text, full: html, text
• Fixed for poly-n runs
  • src/hg/archaeStuff/scripts/archaeBrowser/GenePrediction.pm 1.9 - lines changed: 2, context: html, text, full: html, text
• Added chmod GeneMark_heuristic.mat
  • src/hg/archaeStuff/scripts/archaeBrowser/GenePrediction.pm 1.10 - lines changed: 2, context: html, text, full: html, text