kuhn: changes by commit

review to branch (2009-09-22 to 2009-09-29) v216

• tweak to usage
  • src/utils/qa/bigPush.csh 1.7 - lines changed: 1, context: html, text, full: html, text
• changed netMonDom4 shortLabel to say Net, not Chain
  • src/hg/makeDb/trackDb/orangutan/trackDb.ra 1.6 - lines changed: 1, context: html, text, full: html, text
• moved chimp chainnets next to orang
  • src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.12 - lines changed: 6, context: html, text, full: html, text
• moved override to bottom of track block
  • src/hg/makeDb/trackDb/rhesus/rheMac2/trackDb.ra 1.46 - lines changed: 8, context: html, text, full: html, text
• added matrix to possum.chainPonAbe2 track
  • src/hg/makeDb/trackDb/trackDb.ra 1.534 - lines changed: 2, context: html, text, full: html, text
• added matrix for possum chain
  • src/hg/makeDb/trackDb/rhesus/rheMac2/trackDb.ra 1.47 - lines changed: 5, context: html, text, full: html, text
• moved override block with others
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.67 - lines changed: 6, context: html, text, full: html, text
• changed name of old possum chains to o_db
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.68 - lines changed: 8, context: html, text, full: html, text
• moved monDom4 chainnet blocks from priority.ra to trackDb.ra and changed shortLabel to o_db
  • src/hg/makeDb/trackDb/platypus/ornAna1/priority.ra 1.5 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/platypus/ornAna1/trackDb.ra 1.11 - lines changed: 9, context: html, text, full: html, text
• reduced size of block for guinea pig chains by using override
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.ra 1.8 - lines changed: 12, context: html, text, full: html, text
• changed name of chainnets for monDom4 to o_db
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.ra 1.9 - lines changed: 6, context: html, text, full: html, text
• added chainnet priority overrides for separate chainnetGalGal3 tracks
  • src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.17 - lines changed: 6, context: html, text, full: html, text
• added some parameters for zfish chain
  • src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.18 - lines changed: 6, context: html, text, full: html, text
• fixed the way GENBANK list is used
  • src/utils/qa/findNewTables.csh 1.10 - lines changed: 3, context: html, text, full: html, text
• set vertChainNet track to go beyond dev and turned on four tracks for default
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra 1.51 - lines changed: 7, context: html, text, full: html, text
• moved possum net back with other mammals
  • src/hg/makeDb/trackDb/zebrafish/danRer5/trackDb.ra 1.23 - lines changed: 6, context: html, text, full: html, text
• set hg18 chainnets to o_db
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.ra 1.10 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/xenTro/priority.ra 1.2 - lines changed: 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/xenTro/trackDb.ra 1.20 - lines changed: 7, context: html, text, full: html, text
• combined chainnets for hg18 from priority.ta into trackDb.ra and set shortLabel to o_db
  • src/hg/makeDb/trackDb/xenTro/xenTro2/trackDb.ra 1.16 - lines changed: 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer5/priority.ra 1.6 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer5/trackDb.ra 1.22 - lines changed: 10, context: html, text, full: html, text