kuhn: changes by commit
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branch to review (2009-09-15 to 2009-09-22) v216
- added the common name of the squirt
- src/hg/makeDb/trackDb/squirt/ci1/description.html 1.14 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/squirt/ci2/description.html 1.9 - lines changed: 1, context: html, text, full: html, text
- moved override stuff to bottom of track blocks
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.41 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.40 - lines changed: 22, context: html, text, full: html, text
- src/hg/makeDb/trackDb/cow/bosTau4/trackDb.ra 1.14 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.33 - lines changed: 8, context: html, text, full: html, text
- moved priority overrides into trackDb.ra
- src/hg/makeDb/trackDb/orangutan/priority.ra 1.2 - lines changed: 14, context: html, text, full: html, text
- primate and mammal chain reordering, etc. reduced some influence of stay priority.ra files
- src/hg/makeDb/trackDb/cat/felCat3/trackDb.ra 1.21 - lines changed: 20, context: html, text, full: html, text
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.42 - lines changed: 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/cow/bosTau4/trackDb.ra 1.15 - lines changed: 14, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.34 - lines changed: 42, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/priority.ra 1.7 - lines changed: 27, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/trackDb.ra 1.23 - lines changed: 29, context: html, text, full: html, text
- src/hg/makeDb/trackDb/guineaPig/cavPor3/trackDb.ra 1.6 - lines changed: 20, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra 1.50 - lines changed: 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/marmoset/priority.ra 1.4 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/marmoset/trackDb.ra 1.4 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.63 - lines changed: 12, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/priority.ra 1.12 - lines changed: 12, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.157 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/orangutan/ponAbe2/trackDb.ra 1.15 - lines changed: 22, context: html, text, full: html, text
- src/hg/makeDb/trackDb/orangutan/trackDb.ra 1.4 - lines changed: 18, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rat/rn4/trackDb.ra 1.40 - lines changed: 40, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rhesus/trackDb.ra 1.12 - lines changed: 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.528 - lines changed: 3, context: html, text, full: html, text
- added comment about what GENBANK variable is
- src/utils/qa/qaConfig.bash 1.5 - lines changed: 1, context: html, text, full: html, text
- src/utils/qa/qaConfig.csh 1.5 - lines changed: 1, context: html, text, full: html, text
- typo
- src/utils/qa/getDbSize.csh 1.13 - lines changed: 1, context: html, text, full: html, text
- inproved usage and output
- src/utils/qa/countRows.csh 1.11 - lines changed: 2, context: html, text, full: html, text
- src/utils/qa/getRRtableStatus.csh 1.14 - lines changed: 2, context: html, text, full: html, text
- fixed status dump to work proely for RR
- src/utils/qa/checkTableStatus.csh 1.8 - lines changed: 8, context: html, text, full: html, text
- converted dbChainNet trackNames to chainNetDb to match pattern we've been using
- src/hg/makeDb/trackDb/chimp/trackDb.ra 1.21 - lines changed: 16, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.530 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.529 - lines changed: 31, context: html, text, full: html, text
- src/hg/makeDb/trackDb/zebrafish/danRer6/trackDb.ra 1.5 - lines changed: 1, context: html, text, full: html, text
- dropping release alpha for chainNetMonDom5 so it works on beta
- src/hg/makeDb/trackDb/trackDb.ra 1.531 - lines changed: 1, context: html, text, full: html, text
- changed shortLabel for old monDom4 chainnets
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.418 - lines changed: 2, context: html, text, full: html, text
- returned hg18 longLabel to Human
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.43 - lines changed: 2, context: html, text, full: html, text
- returned monDom4 shortLabel back to Opossum, because not pushing monDom5 chainnet set after all
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.419 - lines changed: 2, context: html, text, full: html, text
- restoring Human to longLabel on hg18 chain/net tracks
- src/hg/makeDb/trackDb/cat/felCat3/trackDb.ra 1.22 - lines changed: 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.35 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.64 - lines changed: 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rat/rn4/trackDb.ra 1.41 - lines changed: 8, context: html, text, full: html, text
- moved priority.ra content into trackDb.ra as overrides
- src/hg/makeDb/trackDb/opossum/priority.ra 1.2 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/trackDb.ra 1.30 - lines changed: 7, context: html, text, full: html, text
- moved override blocks together
- src/hg/makeDb/trackDb/chimp/trackDb.ra 1.22 - lines changed: 11, context: html, text, full: html, text
- reordered chainnets (again - how do they keep getting messd up?) and set old monDom4s to o_db shortLabel
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.44 - lines changed: 17, context: html, text, full: html, text
- moved override block to bottom of track section
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.8 - lines changed: 8, context: html, text, full: html, text
- fixed accidently breakage of 9way. had interrupted the block when moving nscan override
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.9 - lines changed: 2, context: html, text, full: html, text
- changed name to 0_db for hg18 chainnets
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.10 - lines changed: 8, context: html, text, full: html, text
- moved chimp priority.ra into trackDb.ra
- src/hg/makeDb/trackDb/chimp/trackDb.ra 1.23 - lines changed: 18, context: html, text, full: html, text
- restored org name to longLabel
- src/hg/makeDb/trackDb/cow/bosTau4/trackDb.ra 1.16 - lines changed: 2, context: html, text, full: html, text
- fixed to deal with MySQL 5.0 status diff
- src/utils/qa/findNewTables.csh 1.7 - lines changed: 5, context: html, text, full: html, text
- adjusted to use create_time instead of update_time to eliminate genbank from output
- src/utils/qa/findNewTables.csh 1.8 - lines changed: 1, context: html, text, full: html, text
- reversed change to create_time and added GENBANK filter to grep to properly eliminate genbank tables
- src/utils/qa/findNewTables.csh 1.9 - lines changed: 2, context: html, text, full: html, text
- combined priority.ra into trackDb.ra
- src/hg/makeDb/trackDb/chimp/priority.ra 1.5 - lines changed: 19, context: html, text, full: html, text
- removing comment about possum release alpha
- src/hg/makeDb/trackDb/trackDb.ra 1.533 - lines changed: 1, context: html, text, full: html, text
- changed short label to o_db for hg18 chainnets
- src/hg/makeDb/trackDb/orangutan/ponAbe2/trackDb.ra 1.16 - lines changed: 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/orangutan/trackDb.ra 1.5 - lines changed: 7, context: html, text, full: html, text
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