galt: changes by file

review to branch (2009-10-06 to 2009-10-13) v217

• src/makefile
  • 1.65 lines changed: 5, context: html, text, full: html, text
    adding missing utils
• src/hg/encode/hgEncodeSubmit/pipeline_runner.rb
  • 1.5 lines changed: 1, context: html, text, full: html, text
    local vars are undefined, not nil like $global and @instance
• src/hg/encode/hgEncodeSubmit/lib/pipeline_background.rb
  • 1.17 lines changed: 6, context: html, text, full: html, text
    help in the concurrency battle with validator or loader mods to projects record
• src/hg/hgGenome/bedList.c
  • 1.5 lines changed: 40, context: html, text, full: html, text
    getting it to be a little more consistent, better code organization, and fixes problem where custom bedGraph track was not working
  • 1.4 lines changed: 13, context: html, text, full: html, text
    added support for customtrack to getBedGraphField
• src/hg/hgGenome/hgGenome.h
  • 1.38 lines changed: 14, context: html, text, full: html, text
    getting it to be a little more consistent, better code organization, and fixes problem where custom bedGraph track was not working
• src/hg/hgGenome/import.c
  • 1.16 lines changed: 44, context: html, text, full: html, text
    getting it to be a little more consistent, better code organization, and fixes problem where custom bedGraph track was not working
• src/hg/inc/versionInfo.h
  • 1.157 lines changed: 1, context: html, text, full: html, text
    "New version number v217"
• src/hg/makeDb/doc/danRer6.txt
  • 1.11 lines changed: 25, context: html, text, full: html, text
    adding to the pushQ and all.joiner
  • 1.10 lines changed: 1, context: html, text, full: html, text
    its done
• src/hg/makeDb/schema/all.joiner
  • 1.739 lines changed: 1, context: html, text, full: html, text
    suggested by qa
  • 1.737 lines changed: 2, context: html, text, full: html, text
    adding danRer6
• src/hg/visiGene/vgProbeTrack/vgProbeTrack.c
  • 1.14 lines changed: 3, context: html, text, full: html, text
    fix misleading name
  • 1.13 lines changed: 2, context: html, text, full: html, text
    yay, hgLoadChrom takes db arg now
• src/utils/qa/weeklybld/buildEnv.csh
  • 1.83 lines changed: 3, context: html, text, full: html, text
    v217 final build
• src/utils/qa/weeklybld/makeUserApps.csh
  • 1.7 lines changed: 1, context: html, text, full: html, text
    redirect output because 32bit utils build on titan for some reason leaks into the calling terminal output, but not on hgwbeta 64bit for some reason
• src/utils/userApps/makefile
  • 1.5 lines changed: 1, context: html, text, full: html, text
    since all other dates are changing, this one should too
  • 1.4 lines changed: 1, context: html, text, full: html, text
    qa does not want this doc file anymore on hgdownload