galt: changes by commit

review to branch (2009-10-06 to 2009-10-13) v217

• its done
  • src/hg/makeDb/doc/danRer6.txt 1.10 - lines changed: 1, context: html, text, full: html, text
• adding danRer6
  • src/hg/makeDb/schema/all.joiner 1.737 - lines changed: 2, context: html, text, full: html, text
• adding to the pushQ and all.joiner
  • src/hg/makeDb/doc/danRer6.txt 1.11 - lines changed: 25, context: html, text, full: html, text
• qa does not want this doc file anymore on hgdownload
  • src/utils/userApps/makefile 1.4 - lines changed: 1, context: html, text, full: html, text
• since all other dates are changing, this one should too
  • src/utils/userApps/makefile 1.5 - lines changed: 1, context: html, text, full: html, text
• adding missing utils
  • src/makefile 1.65 - lines changed: 5, context: html, text, full: html, text
• redirect output because 32bit utils build on titan for some reason leaks into the calling terminal output, but not on hgwbeta 64bit for some reason
  • src/utils/qa/weeklybld/makeUserApps.csh 1.7 - lines changed: 1, context: html, text, full: html, text
• help in the concurrency battle with validator or loader mods to projects record
  • src/hg/encode/hgEncodeSubmit/lib/pipeline_background.rb 1.17 - lines changed: 6, context: html, text, full: html, text
• suggested by qa
  • src/hg/makeDb/schema/all.joiner 1.739 - lines changed: 1, context: html, text, full: html, text
• local vars are undefined, not nil like $global and @instance
  • src/hg/encode/hgEncodeSubmit/pipeline_runner.rb 1.5 - lines changed: 1, context: html, text, full: html, text
• added support for customtrack to getBedGraphField
  • src/hg/hgGenome/bedList.c 1.4 - lines changed: 13, context: html, text, full: html, text
• getting it to be a little more consistent, better code organization, and fixes problem where custom bedGraph track was not working
  • src/hg/hgGenome/bedList.c 1.5 - lines changed: 40, context: html, text, full: html, text
  • src/hg/hgGenome/hgGenome.h 1.38 - lines changed: 14, context: html, text, full: html, text
  • src/hg/hgGenome/import.c 1.16 - lines changed: 44, context: html, text, full: html, text
• v217 final build
  • src/utils/qa/weeklybld/buildEnv.csh 1.83 - lines changed: 3, context: html, text, full: html, text
• "New version number v217"
  • src/hg/inc/versionInfo.h 1.157 - lines changed: 1, context: html, text, full: html, text
• yay, hgLoadChrom takes db arg now
  • src/hg/visiGene/vgProbeTrack/vgProbeTrack.c 1.13 - lines changed: 2, context: html, text, full: html, text
• fix misleading name
  • src/hg/visiGene/vgProbeTrack/vgProbeTrack.c 1.14 - lines changed: 3, context: html, text, full: html, text