hiram: changes by commit

review to branch (2009-11-17 to 2009-12-01) v220

• Brought up to date on the occassion of losing the copy on genome-test
  • src/product/ex.hg.conf 1.18 - lines changed: 50, context: html, text, full: html, text
• adding geographic allele frequency images options
  • src/product/ex.hg.conf 1.19 - lines changed: 10, context: html, text, full: html, text
• Add -settings option for debug scanning of trackDb settings hash variables
  • src/hg/makeDb/hgTrackDb/hgTrackDb.c 1.54 - lines changed: 17, context: html, text, full: html, text
• Add -settings option to loadTracks and EXTRA options to your private trackDb
  • src/hg/makeDb/trackDb/loadTracks 1.15 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/makefile 1.278 - lines changed: 3, context: html, text, full: html, text
• Previous standard deviation was incorrect, was not using N-1
  • src/utils/ave/ave.c 1.10 - lines changed: 6, context: html, text, full: html, text
• Initial source of a scanner
  • src/hg/utils/scanSettings.pl 1.1 - lines changed: 171, context: html, text, full: html, text
• Add some arguments to make it at least a little bit useful
  • src/hg/utils/scanSettings.pl 1.2 - lines changed: 45, context: html, text, full: html, text
• Bug in determing parent from subTrack variable, may have "off" following name
  • src/hg/utils/scanSettings.pl 1.3 - lines changed: 1, context: html, text, full: html, text
• Proper calculation lodToBedScore for 46-way mostConserved tracks
  • src/hg/makeDb/doc/hg19.txt 1.63 - lines changed: 16, context: html, text, full: html, text
• Initial contents
  • src/hg/makeDb/hgLoadWiggle/wigTableStats.sh 1.1 - lines changed: 45, context: html, text, full: html, text
• Adding missing type wig min max limits and adding viewLimits to those guys at + or - five stdDev
  • src/hg/makeDb/trackDb/human/trackDb.ra 1.471 - lines changed: 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm8/trackDb.ra 1.57 - lines changed: 50, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/sacCer/trackDb.ra 1.40 - lines changed: 2, context: html, text, full: html, text
• remove obsolete ponAbe1 and rn5 and add a listDbs target
  • src/hg/makeDb/trackDb/makefile 1.280 - lines changed: 11, context: html, text, full: html, text
• Add viewLimits recommended calculation
  • src/hg/makeDb/hgLoadWiggle/wigTableStats.sh 1.2 - lines changed: 19, context: html, text, full: html, text
• change defaultViewLimits to viewLimits
  • src/hg/makeDb/doc/ce1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/galGal1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/panTro1.txt 1.7 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/pyrAer1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro1/trackDb.ra 1.37 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/trackDb.ra 1.574 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/trackDb.ra 1.427 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.427 - lines changed: 15, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.683 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.encode.ra 1.97 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra 1.473 - lines changed: 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/trackDb.ra 1.89 - lines changed: 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/trackDb.ra.save 1.2 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm3/trackDb.ra 1.40 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm4/trackDb.ra 1.26 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/trackDb.ra 1.158 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/opossum/monDom4/trackDb.ra 1.23 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/rat/rn3/trackDb.ra 1.61 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/sacCer/trackDb.ra 1.41 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra 1.539 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/cb1/trackDb.ra 1.20 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce1/trackDb.ra 1.38 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce4/trackDb.ra 1.37 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce6/trackDb.ra 1.13 - lines changed: 4, context: html, text, full: html, text
  • src/utils/wigAsciiToBinary/wiggleFAQ.html 1.2 - lines changed: 4, context: html, text, full: html, text
• eliminate defaultViewLimits it is all viewLimits now
  • src/hg/inc/wiggle.h 1.88 - lines changed: 1, context: html, text, full: html, text
  • src/hg/lib/wiggleCart.c 1.31 - lines changed: 10, context: html, text, full: html, text
• premature, need to wait for trackDb to update before eliminating the recognition of defaultViewLimits
  • src/hg/inc/wiggle.h 1.89 - lines changed: 1, context: html, text, full: html, text
  • src/hg/lib/wiggleCart.c 1.32 - lines changed: 10, context: html, text, full: html, text
• change autoScaleDefault to be only autoScale
  • src/utils/wigAsciiToBinary/wiggleFAQ.html 1.3 - lines changed: 3, context: html, text, full: html, text
• Add viewLimits to usage message
  • src/hg/makeDb/hgLoadWiggle/wigTableStats.sh 1.3 - lines changed: 4, context: html, text, full: html, text
• Add a viewLimits for stanfordNRSFOverlaps
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.428 - lines changed: 1, context: html, text, full: html, text
• Allow it to work on multiple tables in a single database
  • src/hg/makeDb/hgLoadWiggle/wigTableStats.sh 1.4 - lines changed: 7, context: html, text, full: html, text
• change autoScaleDefault to autoScale
  • src/hg/makeDb/doc/bosTau4.txt 1.19 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/braFlo1.txt 1.19 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/calJac1.txt 1.21 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/cavPor3.txt 1.21 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/ce1.txt 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/ce2.txt 1.8 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/danRer2.txt 1.6 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/danRer3.txt 1.17 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/danRer4.txt 1.35 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/dm1.txt 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/ferrAcid1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/galGal1.txt 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg16.txt 1.11 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg17.txt 1.126 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/metAce1.txt 1.3 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/doc/metMar1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methBark1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methBurt1.txt 1.2 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methJann1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methKand1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methMaze1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/methTher1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/mm5.txt 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/oryLat2.txt 1.17 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/panTro1.txt 1.8 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/doc/petMar1.txt 1.23 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/picrTorr1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/pyrAby1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/pyrAer1.txt 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/pyrFur2.txt 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/pyrHor1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/rheMac2.txt 1.19 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/sacCer1.txt 1.10 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/sulSol1.txt 1.2 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/sulfAcid1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/sulfToko1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/therAcid1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/therKoda1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/therVolc1.txt 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/README 1.91 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/borEut13/trackDb.ra 1.7 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/canHg10/trackDb.ra 1.9 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/canHg11/trackDb.ra 1.4 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/canHg12/trackDb.ra 1.5 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/canHg4/trackDb.ra 1.11 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/canHg9/trackDb.ra 1.6 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/car46/trackDb.ra 1.8 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/catArr1/trackDb.ra 1.4 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/euaGli13/trackDb.ra 1.3 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/gliRes13/trackDb.ra 1.3 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/homIni13/trackDb.ra 1.6 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/homIni14/trackDb.ra 1.5 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/priMat13/trackDb.ra 1.5 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ancestor/rodEnt13/trackDb.ra 1.3 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat3/trackDb.ra 1.23 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chicken/galGal2/trackDb.ra 1.71 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.ra 1.14 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro1/trackDb.ra 1.38 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.45 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cow/bosTau4/trackDb.ra 1.17 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam1/trackDb.ra 1.36 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.38 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm1/trackDb.ra 1.59 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm2/trackDb.ra 1.57 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm3/trackDb.ra 1.14 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/droSim1/trackDb.ra 1.18 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/trackDb.ra 1.82 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/fugu/fr2/trackDb.ra 1.8 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hiv1/trackDb.ra 1.13 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivVax003Vax004/trackDb.ra 1.6 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hiva244/trackDb.ra 1.2 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivgne8/trackDb.ra 1.7 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivgne8v2/trackDb.ra 1.4 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivmn/trackDb.ra 1.3 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivmn1/trackDb.ra 1.4 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/hivmn2/trackDb.ra 1.4 - lines changed: 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/hiv/vax004/trackDb.ra 1.2 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/horse/equCab2/trackDb.ra 1.10 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/trackDb.encode.ra 1.14 - lines changed: 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/trackDb.ra 1.575 - lines changed: 17, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/trackDb.encode.ra 1.177 - lines changed: 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/trackDb.ra 1.428 - lines changed: 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.encodeChrom.ra 1.7 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.430 - lines changed: 47, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra 1.67 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.encode.ra 1.98 - lines changed: 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra 1.474 - lines changed: 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lamprey/petMar1/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/aerPer1/trackDb.ra 1.15 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/aquiAeol/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/beowSpri_East_D_072007_1/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/caldMaqu0/trackDb.ra 1.9 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/caldMaqu1/trackDb.ra 1.17 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/campJeju/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/cenaSymb1/trackDb.ra 1.10 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/desuAuda/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/desuKamc1/trackDb.ra 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/eschColi_K12/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/ferrAcid1/trackDb.ra 1.13 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/geobBemi0/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/geobLovl0/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/geobMeta_GS15/trackDb.ra 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/geobSulf/trackDb.ra 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/geobUran_RF4/trackDb.ra 1.6 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/halMar1/trackDb.ra 1.20 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloHalo1/trackDb.ra 1.24 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloSali1/trackDb.ra 1.13 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloUtah1/trackDb.ra 1.6 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloVolc1/trackDb.ra 1.9 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloVolc1_1/trackDb.ra 1.8 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/haloWals1/trackDb.ra 1.15 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliAcin_SHEEBA/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliHepa/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_26695/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_G27/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_HPAG1/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_J99/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_J99_1/trackDb.ra 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/heliPylo_SHI470/trackDb.ra 1.2 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/hydrSp_128_5R1/trackDb.ra 1.2 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/hydrY04A/trackDb.ra 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/hypeButy1/trackDb.ra 1.15 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/igniHosp1/trackDb.ra 1.13 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/joseCoat_042308/trackDb.ra 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/mculMari1/trackDb.ra 1.12 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/metAce1/trackDb.ra 1.16 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/metMar1/trackDb.ra 1.20 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/metaSedu/trackDb.ra 1.11 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lowelab/methAeol1/trackDb.ra 1.12 - lines changed: 1, context: html, text, full: html, text
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• turn on upstream maf for 46-way conservation on hg19
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• Update genbank etc/genbank.conf to include upstreamMaf definitions, and phyloP track histograms
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