tdreszer: changes by file

review to branch (2010-01-26 to 2010-02-02) v224

• src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl
  • 1.25 lines changed: 10, context: html, text, full: html, text
    Altered sort order. take only last matching line of metadata from fileDb.ra. Don't show antibody if its eq input
• src/hg/encode/encodeValidate/config/cv.ra
  • 1.203 lines changed: 22, context: html, text, full: html, text
    Minor adjustments to cell descriptions and officially added UCDavis as control type. This had been implied for some time.
  • 1.201 lines changed: 12, context: html, text, full: html, text
    Changed Mouse_IgG to IgG-mus and Rabbit_IgG to IgG-rab
• src/hg/js/hui.js
  • 1.49 lines changed: 7, context: html, text, full: html, text
    Neglected 4 state subCBs in last check in
  • 1.48 lines changed: 9, context: html, text, full: html, text
    Changes to speed up matrix buttons
• src/hg/lib/hui.c
  • 1.255 lines changed: 9, context: html, text, full: html, text
    Show subId in metadata and hide antibody if it is really input.
• src/hg/makeDb/trackDb/tagTypes.tab
  • 1.9 lines changed: 1, context: html, text, full: html, text
    minGrayLevel is for narrowPeaks too
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.859 lines changed: 1701, context: html, text, full: html, text
    Add rank as separate from replicate to UW
  • 1.857 lines changed: 3534, context: html, text, full: html, text
    Versioned a lot of Open Chromating Peaks and did some reorganization of the deck chairs
  • 1.852 lines changed: 1, context: html, text, full: html, text
    Added abbreviations to cell line titles in matrix for UW DNase.
  • 1.851 lines changed: 11, context: html, text, full: html, text
    Fix for mapability sort order
  • 1.850 lines changed: 1566, context: html, text, full: html, text
    Clean up of old crud. UW ChIP to UW Histone. Revoke 1 more for YDH
  • 1.846 lines changed: 84, context: html, text, full: html, text
    Removed 2 nonexistant tracks and revoked the 3 HUVECs for YDH
  • 1.845 lines changed: 46, context: html, text, full: html, text
    Re-pair 11 Yale experiments from IgG-rab to IgG-mus (temporary pairing)
  • 1.842 lines changed: 356, context: html, text, full: html, text
    Rearranged a lot of Yale metadata
  • 1.839 lines changed: 1, context: html, text, full: html, text
    Added minGrayLevel to HAIB TFSB preaks, since they have scores below 100.
  • 1.838 lines changed: 39, context: html, text, full: html, text
    Added treatments to long labels of HAIB TFSB
  • 1.837 lines changed: 47, context: html, text, full: html, text
    Fixed a number of experiments which should have hade Rabbit_IgG protocol declared for Yale
  • 1.836 lines changed: 9, context: html, text, full: html, text
    Fixed HepG2/SREBP1 to HepG2/SREBP1/pravastatin for Yale