tdreszer: changes by file

branch to review (2010-02-02 to 2010-02-10) v225

• src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl
  • 1.26 lines changed: 4, context: html, text, full: html, text
    Added file count at end of html page, by QA request.
• src/hg/encode/encodeValidate/config/cv.ra
  • 1.211 lines changed: 4, context: html, text, full: html, text
    And one more time
  • 1.210 lines changed: 48, context: html, text, full: html, text
    More protocol naming adjustments
  • 1.209 lines changed: 101, context: html, text, full: html, text
    Made protocols more specific to groups. This is the only identification of a cell line to a praticular group
  • 1.208 lines changed: 1, context: html, text, full: html, text
    Marking prostate cell line as provisional since we have no approved protocol
  • 1.207 lines changed: 6, context: html, text, full: html, text
    Three cell lines for Crawford's group are no longer provisional.
• src/hg/encode/hgEncodeVocab/hgEncodeVocab.c
  • 1.30 lines changed: 3, context: html, text, full: html, text
    Show sex for cells
• src/hg/hgTracks/config.c
  • 1.89 lines changed: 19, context: html, text, full: html, text
    Changes that I have been sitting on awhile. More info on unexpected errors. Fixes to dragReorder. Support for simpler navigation links.
• src/hg/hgTracks/hgTracks.c
  • 1.1622 lines changed: 72, context: html, text, full: html, text
    Changes that I have been sitting on awhile. More info on unexpected errors. Fixes to dragReorder. Support for simpler navigation links.
• src/hg/hgTracks/hgTracks.h
  • 1.199 lines changed: 2, context: html, text, full: html, text
    Changes that I have been sitting on awhile. More info on unexpected errors. Fixes to dragReorder. Support for simpler navigation links.
• src/hg/hgTracks/imageV2.c
  • 1.22 lines changed: 45, context: html, text, full: html, text
    Safegaurds against empty tracks which can legitimately happen when there is no centerLabel
  • 1.21 lines changed: 200, context: html, text, full: html, text
    Changes that I have been sitting on awhile. More info on unexpected errors. Fixes to dragReorder. Support for simpler navigation links.
• src/hg/hgTracks/imageV2.h
  • 1.14 lines changed: 4, context: html, text, full: html, text
    Safegaurds against empty tracks which can legitimately happen when there is no centerLabel
  • 1.13 lines changed: 3, context: html, text, full: html, text
    Changes that I have been sitting on awhile. More info on unexpected errors. Fixes to dragReorder. Support for simpler navigation links.
• src/hg/js/hui.js
  • 1.50 lines changed: 38, context: html, text, full: html, text
    Big changes to move matrix CB normalizeAll code from js to C. These changes should make the large composites less sluggish
• src/hg/js/utils.js
  • 1.27 lines changed: 14, context: html, text, full: html, text
    Added some timing routines to help focus on selfish, inefficient code
• src/hg/lib/hui.c
  • 1.259 lines changed: 349, context: html, text, full: html, text
    Big changes to move matrix CB normalizeAll code from js to C. These changes should make the large composites less sluggish
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.865 lines changed: 65, context: html, text, full: html, text
    Standardized metadata to 'antibody=Input'.
• src/inc/cheapcgi.h
  • 1.71 lines changed: 7, context: html, text, full: html, text
    Needed to rewrite the 2way CB routines. Now called fourWay
• src/lib/cheapcgi.c
  • 1.131 lines changed: 30, context: html, text, full: html, text
    Needed to rewrite the 2way CB routines. Now called fourWay
• src/lib/htmshell.c
  • 1.65 lines changed: 5, context: html, text, full: html, text
    Fixed the warnbox to make hidden 'OK' not be picked up by select all.