kate: changes by commit

review to branch (2010-03-16 to 2010-03-23) v227

• Remove restriction timestamps from ENCODE Mapability as data restriction has been explicitly waiived by the labs (not part of the main production effort).
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.924 - lines changed: 12, context: html, text, full: html, text
• • src/hg/encode/DAFs/2.0/haibMethylRrbs.daf 1.1 - lines changed: 26, context: html, text, full: html, text
• Generalize survey link
  • src/hg/hgGateway/hgGateway.c 1.116 - lines changed: 3, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c 1.1635 - lines changed: 3, context: html, text, full: html, text
• Consistency in layout
  • src/hg/encode/DAFs/2.0/broadChipSeq.daf 1.2 - lines changed: 41, context: html, text, full: html, text
• Restoring input files for chipseq test (removed due to excessive size?) and adjusting output to match
  • src/hg/encode/encodeValidate/test/expected/chipseq/README.txt 1.8 - lines changed: 5, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/expected/chipseq/load.ra 1.8 - lines changed: 9, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/expected/chipseq/trackDb.ra 1.11 - lines changed: 14, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/input/chipseq/FoxP2_SL167.align_25.hg18.1.txt.BED 1.1 - lines changed: 49, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/input/chipseq/FoxP2_SL167.align_25.hg18.2.txt.BED 1.1 - lines changed: 51, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/input/chipseq/SL_167_peak_caller.ChIP.peaks 1.1 - lines changed: 99, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/input/chipseq/StanfordChip-Test-Jun08.DDF 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/test/input/chipseq/StanfordChip.DAF 1.11 - lines changed: 2, context: html, text, full: html, text
• Add support for DAF dataAgreementSuffix field
  • src/hg/encode/encodeValidate/config/fields.ra 1.28 - lines changed: 10, context: html, text, full: html, text
  • src/hg/utils/automation/Encode.pm 1.59 - lines changed: 3, context: html, text, full: html, text