hiram: changes by commit

branch to review (2010-05-18 to 2010-05-25) v232

• add unix sort command example
  • src/utils/bedToBigBed/bedToBigBed.c 1.24 - lines changed: 3, context: html, text, full: html, text
• add information about how to sort the input file with sort
  • src/utils/bedGraphToBigWig/bedGraphToBigWig.c 1.27 - lines changed: 2, context: html, text, full: html, text
• initial format of text2Genome data tables
  • src/hg/lib/t2gArticle.sql 1.1 - lines changed: 15, context: html, text, full: html, text
  • src/hg/lib/t2gSequence.sql 1.1 - lines changed: 8, context: html, text, full: html, text
• initial code for text2Genome details
  • src/hg/hgc/hgc.c 1.1630 - lines changed: 4, context: html, text, full: html, text
  • src/hg/hgc/hgc.h 1.55 - lines changed: 4, context: html, text, full: html, text
  • src/hg/hgc/makefile 1.68 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgc/t2g.c 1.1 - lines changed: 112, context: html, text, full: html, text
• initial experiment for text2Genome
  • src/hg/makeDb/trackDb/tagTypes.tab 1.26 - lines changed: 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra 1.632 - lines changed: 12, context: html, text, full: html, text
• Adding t2g html page, fix error in gap.html and reset labels for t2g
  • src/hg/makeDb/trackDb/gap.html 1.8 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/t2g.html 1.1 - lines changed: 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra 1.633 - lines changed: 3, context: html, text, full: html, text
• Adding version information printout
  • src/hg/hgc/t2g.c 1.2 - lines changed: 45, context: html, text, full: html, text
• rearrange heading information in t2g printout
  • src/hg/hgc/t2g.c 1.3 - lines changed: 13, context: html, text, full: html, text
• using style to set font size for abstract
  • src/hg/hgc/t2g.c 1.4 - lines changed: 3, context: html, text, full: html, text
• adding text2Genome definitions
  • src/hg/makeDb/schema/all.joiner 1.803 - lines changed: 10, context: html, text, full: html, text
• correct db spec for t2g tables and minCheck coverage
  • src/hg/makeDb/schema/all.joiner 1.804 - lines changed: 4, context: html, text, full: html, text
• better position header information
  • src/hg/hgc/t2g.c 1.5 - lines changed: 29, context: html, text, full: html, text
• htdocs-download is actually htdocs-hgdownload
  • src/hg/utils/automation/HgAutomate.pm 1.29 - lines changed: 3, context: html, text, full: html, text
• adding 2bit sequence file to bigZips
  • src/hg/utils/automation/makeDownloads.pl 1.27 - lines changed: 2, context: html, text, full: html, text
• initial text description for text2Genome
  • src/hg/makeDb/trackDb/t2g.html 1.2 - lines changed: 56, context: html, text, full: html, text
• fixing error
  • src/hg/makeDb/trackDb/t2g.html 1.3 - lines changed: 4, context: html, text, full: html, text
• fixup URLs that may have blanks in them, do not quote the whole thing
  • src/hg/hgTracks/imageV2.c 1.32 - lines changed: 6, context: html, text, full: html, text