markd: changes by file

branch to review (2010-05-18 to 2010-05-25) v232

• src/hg/utils/gff3ToGenePred/tests/makefile
  • 1.5 lines changed: 6, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/hg/utils/gff3ToGenePred/tests/expected/bogusQuotesTest.out
  • 1.1 lines changed: 2, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/hg/utils/gff3ToGenePred/tests/input/bogusQuotes.gff3
  • 1.1 lines changed: 2, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/inc/gff3.h
  • 1.3 lines changed: 7, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/lib/gff3.c
  • 1.5 lines changed: 109, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/lib/tests/input/specialCasesTest.gff3
  • 1.2 lines changed: 2, context: html, text, full: html, text
    Made C attribute related names more consistent with GFF3 specification. Fixed bug were bogus quotes were not detected. Fixed bug with empty attribute values.
• src/utils/cvsTools/cvsFiles
  • 1.5 lines changed: 6, context: html, text, full: html, text
    allow specifying directories