kent: changes by file

review to branch (2010-06-01 to 2010-06-07) v233

• src/README
  • 1.24 lines changed: 3, context: html, text, full: html, text
    Adding limit to line size.
• src/hg/hgTables/bedList.c
  • 1.75 lines changed: 3, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/bigWig.c
  • 1.7 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/compositeTrack.c
  • 1.20 lines changed: 2, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/correlate.c
  • 1.81 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/filterFields.c
  • 1.82 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/hgTables.h
  • 1.147 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/intersect.c
  • 1.54 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/mainPage.c
  • 1.154 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/sumStats.c
  • 1.29 lines changed: 1, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTables/wiggle.c
  • 1.79 lines changed: 2, context: html, text, full: html, text
    Fixing symbol conflict with table browser isBigWig function and new library function.
• src/hg/hgTracks/simpleTracks.c
  • 1.147 lines changed: 1, context: html, text, full: html, text
    Adding a few pixels to left label area so that it really does fit the number of characters you select.
• src/hg/inc/jksql.h
  • 1.89 lines changed: 1, context: html, text, full: html, text
    Changing return type of modification-date-ascertaining functions to time_t.
• src/hg/lib/jksql.c
  • 1.141 lines changed: 2, context: html, text, full: html, text
    Changing return type of modification-date-ascertaining functions to time_t.
• src/hg/lib/wigAsciiToBinary.c
  • 1.35 lines changed: 12, context: html, text, full: html, text
    Making wigEncode abort on second track it sees.
• src/hg/makeDb/hgTrackDb/hgTrackDb.c
  • 1.71 lines changed: 2, context: html, text, full: html, text
    Removing hideFirst option, which no longer does anything.
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.1003 lines changed: 2, context: html, text, full: html, text
    Shortening some long labels
• src/hg/makeDb/trackDb/human/hg18/wgEncodeReg.html
  • 1.1 lines changed: 24, context: html, text, full: html, text
    Starting on description page for ENCODE regulatory supertrack.
• src/inc/bigWig.h
  • 1.14 lines changed: 3, context: html, text, full: html, text
    Adding isBigWig function.
• src/inc/metaWig.h
  • 1.3 lines changed: 3, context: html, text, full: html, text
    Removing parameter to metaWigOpen.
  • 1.2 lines changed: 2, context: html, text, full: html, text
    Removing bbiInternal include.
  • 1.1 lines changed: 43, context: html, text, full: html, text
    Moving metaWig stuff from wigCorrelate to library.
• src/inc/portable.h
  • 1.31 lines changed: 1, context: html, text, full: html, text
    Changing return type of modification-date-ascertaining functions to time_t.
• src/lib/bwgQuery.c
  • 1.24 lines changed: 13, context: html, text, full: html, text
    Adding isBigWig function.
• src/lib/makefile
  • 1.160 lines changed: 4, context: html, text, full: html, text
    Moving metaWig stuff from wigCorrelate to library.
• src/lib/metaWig.c
  • 1.2 lines changed: 6, context: html, text, full: html, text
    Removing parameter to metaWigOpen.
  • 1.1 lines changed: 184, context: html, text, full: html, text
    Moving metaWig stuff from wigCorrelate to library.
• src/lib/osunix.c
  • 1.48 lines changed: 1, context: html, text, full: html, text
    Changing return type of modification-date-ascertaining functions to time_t.
• src/utils/makefile
  • 1.78 lines changed: 1, context: html, text, full: html, text
    Adding wigCorrelate to build.
• src/utils/wigCorrelate/wigCorrelate.c
  • 1.7 lines changed: 27, context: html, text, full: html, text
    Removing parameter to metaWigOpen.
  • 1.6 lines changed: 2, context: html, text, full: html, text
    Fixing includes so compiles again.
  • 1.5 lines changed: 209, context: html, text, full: html, text
    Moving metaWig stuff from wigCorrelate to library.
  • 1.4 lines changed: 1, context: html, text, full: html, text
    Fixed typo in comment.
• src/utils/wigToBed/makefile
  • 1.1 lines changed: 18, context: html, text, full: html, text
    Seems to work.
• src/utils/wigToBed/wigToBed.c
  • 1.1 lines changed: 95, context: html, text, full: html, text
    Seems to work.