kent: changes by commit

review to branch (2010-06-01 to 2010-06-07) v233

• Changing return type of modification-date-ascertaining functions to time_t.
  • src/hg/inc/jksql.h 1.89 - lines changed: 1, context: html, text, full: html, text
  • src/hg/lib/jksql.c 1.141 - lines changed: 2, context: html, text, full: html, text
  • src/inc/portable.h 1.31 - lines changed: 1, context: html, text, full: html, text
  • src/lib/osunix.c 1.48 - lines changed: 1, context: html, text, full: html, text
• Fixed typo in comment.
  • src/utils/wigCorrelate/wigCorrelate.c 1.4 - lines changed: 1, context: html, text, full: html, text
• Adding limit to line size.
  • src/README 1.24 - lines changed: 3, context: html, text, full: html, text
• Moving metaWig stuff from wigCorrelate to library.
  • src/inc/metaWig.h 1.1 - lines changed: 43, context: html, text, full: html, text
  • src/lib/makefile 1.160 - lines changed: 4, context: html, text, full: html, text
  • src/lib/metaWig.c 1.1 - lines changed: 184, context: html, text, full: html, text
  • src/utils/wigCorrelate/wigCorrelate.c 1.5 - lines changed: 209, context: html, text, full: html, text
• Fixing includes so compiles again.
  • src/utils/wigCorrelate/wigCorrelate.c 1.6 - lines changed: 2, context: html, text, full: html, text
• Removing bbiInternal include.
  • src/inc/metaWig.h 1.2 - lines changed: 2, context: html, text, full: html, text
• Removing parameter to metaWigOpen.
  • src/inc/metaWig.h 1.3 - lines changed: 3, context: html, text, full: html, text
  • src/lib/metaWig.c 1.2 - lines changed: 6, context: html, text, full: html, text
  • src/utils/wigCorrelate/wigCorrelate.c 1.7 - lines changed: 27, context: html, text, full: html, text
• Removing hideFirst option, which no longer does anything.
  • src/hg/makeDb/hgTrackDb/hgTrackDb.c 1.71 - lines changed: 2, context: html, text, full: html, text
• Adding isBigWig function.
  • src/inc/bigWig.h 1.14 - lines changed: 3, context: html, text, full: html, text
  • src/lib/bwgQuery.c 1.24 - lines changed: 13, context: html, text, full: html, text
• Fixing symbol conflict with table browser isBigWig function and new library function.
  • src/hg/hgTables/bedList.c 1.75 - lines changed: 3, context: html, text, full: html, text
  • src/hg/hgTables/bigWig.c 1.7 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/compositeTrack.c 1.20 - lines changed: 2, context: html, text, full: html, text
  • src/hg/hgTables/correlate.c 1.81 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/filterFields.c 1.82 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/hgTables.h 1.147 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/intersect.c 1.54 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/mainPage.c 1.154 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/sumStats.c 1.29 - lines changed: 1, context: html, text, full: html, text
  • src/hg/hgTables/wiggle.c 1.79 - lines changed: 2, context: html, text, full: html, text
• Shortening some long labels
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.1003 - lines changed: 2, context: html, text, full: html, text
• Seems to work.
  • src/utils/wigToBed/makefile 1.1 - lines changed: 18, context: html, text, full: html, text
  • src/utils/wigToBed/wigToBed.c 1.1 - lines changed: 95, context: html, text, full: html, text
• Adding wigCorrelate to build.
  • src/utils/makefile 1.78 - lines changed: 1, context: html, text, full: html, text
• Adding a few pixels to left label area so that it really does fit the number of characters you select.
  • src/hg/hgTracks/simpleTracks.c 1.147 - lines changed: 1, context: html, text, full: html, text
• Making wigEncode abort on second track it sees.
  • src/hg/lib/wigAsciiToBinary.c 1.35 - lines changed: 12, context: html, text, full: html, text
• Starting on description page for ENCODE regulatory supertrack.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeReg.html 1.1 - lines changed: 24, context: html, text, full: html, text