File Changes for kent

v235_preview to v235_base (2010-06-29 to 2010-07-06) v235

• .gitignore
  • lines changed 6, context: html, text, full: html, text
    Adding more common things for git to ignore.
• src/hg/encode/encodeMergeReplicatesBatch/encodeMergeReplicatesBatch.c
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in comment.
• src/hg/hgc/encodeClick.c
  • lines changed 16, context: html, text, full: html, text
    Removing unused routine.
• src/hg/hgc/hgc.h
  • lines changed 4, context: html, text, full: html, text
    Removing unused routine.
• src/hg/hgc/peakClusters.c
  • lines changed 29, context: html, text, full: html, text
    Eliminating inputTracks and inputTrackSelGroup tags, which have been replaced with the inputTrackTable tag.
• src/hg/makeDb/doc/hg18.txt
  • lines changed 1, context: html, text, full: html, text
    Updating comment that had grown stale.
  • lines changed 620, context: html, text, full: html, text
    Restoring about 600 lines deleted mysteriously in 3 different places. I sure don't remember doing this and wander what sort of editor typo I could have made. Any way the code review caught it at least!
• src/hg/makeDb/trackDb/README
  • lines changed 13, context: html, text, full: html, text
    Eliminating inputTracks and inputTrackSelGroup tags, which have been replaced with the inputTrackTable tag.
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • lines changed 4, context: html, text, full: html, text
    Eliminating inputTracks and inputTrackSelGroup tags, which have been replaced with the inputTrackTable tag.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeReg.html
  • lines changed 39, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegDnaseClustered.html
  • lines changed 1, context: html, text, full: html, text
    Improving grammar in description.
  • lines changed 28, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k27ac.html
  • lines changed 22, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k4me1.html
  • lines changed 20, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
  • lines changed 3, context: html, text, full: html, text
    Renaming .html file to correspond to track name.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k4me3.html
  • lines changed 21, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhancer.html
  • lines changed 3, context: html, text, full: html, text
    Renaming .html file to correspond to track name.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegTfbsClustered.html
  • lines changed 51, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRegTxn.html
  • lines changed 18, context: html, text, full: html, text
    Doing another pass at the integrated regulatory track .html pages.
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 2, context: html, text, full: html, text
    Eliminating inputTracks and inputTrackSelGroup tags, which have been replaced with the inputTrackTable tag.
• src/hg/regulate/regClusterBedExpCfg/regClusterBedExpCfg.c
  • lines changed 3, context: html, text, full: html, text
    Improving usage statement and a comment.
• src/lib/rqlParse.c
  • lines changed 3, context: html, text, full: html, text
    Making it so that a missing 'from' clause in a rql select statement triggers an error message instead of just causing empty output.