Commits for kent

v235_preview to v235_base (2010-06-29 to 2010-07-06) v235

• Improving grammar in description.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegDnaseClustered.html - lines changed 1, context: html, text, full: html, text
• Removing unused routine.
  • src/hg/hgc/encodeClick.c - lines changed 16, context: html, text, full: html, text
  • src/hg/hgc/hgc.h - lines changed 4, context: html, text, full: html, text
• Eliminating inputTracks and inputTrackSelGroup tags, which have been replaced with the inputTrackTable tag.
  • src/hg/hgc/peakClusters.c - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/README - lines changed 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 2, context: html, text, full: html, text
• Updating comment that had grown stale.
  • src/hg/makeDb/doc/hg18.txt - lines changed 1, context: html, text, full: html, text
• Fixing typo in comment.
  • src/hg/encode/encodeMergeReplicatesBatch/encodeMergeReplicatesBatch.c - lines changed 1, context: html, text, full: html, text
• Making it so that a missing 'from' clause in a rql select statement triggers an error message instead of just causing empty output.
  • src/lib/rqlParse.c - lines changed 3, context: html, text, full: html, text
• Doing another pass at the integrated regulatory track .html pages.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeReg.html - lines changed 39, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegDnaseClustered.html - lines changed 28, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k27ac.html - lines changed 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k4me1.html - lines changed 20, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k4me3.html - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegTfbsClustered.html - lines changed 51, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegTxn.html - lines changed 18, context: html, text, full: html, text
• Renaming .html file to correspond to track name.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhH3k4me1.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeRegMarkEnhancer.html - lines changed 3, context: html, text, full: html, text
• Restoring about 600 lines deleted mysteriously in 3 different places. I sure don't remember doing this and wander what sort of editor typo I could have made. Any way the code review caught it at least!
  • src/hg/makeDb/doc/hg18.txt - lines changed 620, context: html, text, full: html, text
• Improving usage statement and a comment.
  • src/hg/regulate/regClusterBedExpCfg/regClusterBedExpCfg.c - lines changed 3, context: html, text, full: html, text
• Adding more common things for git to ignore.
  • .gitignore - lines changed 6, context: html, text, full: html, text