File Changes for cricket

v237_preview to v237_base (2010-07-27 to 2010-08-03) v237

• src/hg/encode/DAFs/2.0/YdhrRnaSeq.daf
  • lines changed 59, context: html, text, full: html, text
    Changed this file to be lowercase name.
• src/hg/encode/DAFs/2.0/cshlLongRnaSeq.daf
  • lines changed 3, context: html, text, full: html, text
    Checking in the most recent fiddles with these DAFs
• src/hg/encode/DAFs/2.0/haibMethylRrbs.daf
  • lines changed 17, context: html, text, full: html, text
    Checking in the most recent fiddles with these DAFs
• src/hg/encode/DAFs/2.0/ydhrRnaSeq.daf
  • lines changed 58, context: html, text, full: html, text
    Changed this file to be lowercase name.
  • lines changed 64, context: html, text, full: html, text
    Checking in the most recent fiddles with these DAFs
• src/hg/encode/hgEncodeVocab/hgEncodeVocab.c
  • lines changed 3, context: html, text, full: html, text
    Added line break for viewing of vendorIds
  • lines changed 52, context: html, text, full: html, text
    Changed the antibody display to accept semi-colon separated lists for the vendorName, vendorId, and orderUrl.
• src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeSunyalbanyRnaGeneChip.ra
  • lines changed 8, context: html, text, full: html, text
    This has the ripTgtProtien added as the antibody as well. Then It can be used either way we decide to go with the cv.ra
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 176, context: html, text, full: html, text
    added origAssembly and corrected dates
  • lines changed 1758, context: html, text, full: html, text
    Revert "These files have all had origAssembly added, but they will need to have the release date modified"The CshlShort had affy informaiton in it. I need to start this over. This reverts commit 196e751a37514efca4687d4d0e50fb4ca8e71a8e. Conflicts: src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra
  • lines changed 1759, context: html, text, full: html, text
    These files have all had origAssembly added, but they will need to have the release date modified
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra
  • lines changed 57, context: html, text, full: html, text
    The correct magic number
  • lines changed 18, context: html, text, full: html, text
    The meta data is changed to reflect the orig assembly and the correct dates.
  • lines changed 21, context: html, text, full: html, text
    Revert "These files have all had origAssembly added, but they will need to have the release date modified"The CshlShort had affy informaiton in it. I need to start this over. This reverts commit 196e751a37514efca4687d4d0e50fb4ca8e71a8e. Conflicts: src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra
  • lines changed 18, context: html, text, full: html, text
    Changed the metadata and the short labels for GisRnaSeq
  • lines changed 33, context: html, text, full: html, text
    These files have all had origAssembly added, but they will need to have the release date modified
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
  • lines changed 137, context: html, text, full: html, text
    Revert "These files have all had origAssembly added, but they will need to have the release date modified"The CshlShort had affy informaiton in it. I need to start this over. This reverts commit 196e751a37514efca4687d4d0e50fb4ca8e71a8e. Conflicts: src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra
  • lines changed 137, context: html, text, full: html, text
    These files have all had origAssembly added, but they will need to have the release date modified
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyAlbanyTiling.ra
  • lines changed 9, context: html, text, full: html, text
    This commit really has the metaDb changes for SunyAlbanyTiling. With the addition of antibody as well as ripTgtProtien.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyGeneST.ra
  • lines changed 22, context: html, text, full: html, text
    This is the metadata for Suny updated with the antibody, the ripTgtProtien has not been removed
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyTiling.ra
  • lines changed 145, context: html, text, full: html, text
    File made on accident
  • lines changed 145, context: html, text, full: html, text
    This is the metadata for Suny updated with the antibody, the ripTgtProtien has not been removed
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    I have changed the names of the include files to match the standard. I also have been working on the short labels for the Suny tracks.
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncodeSuny.ra
  • lines changed 246, context: html, text, full: html, text
    I have changed the names of the include files to match the standard. I also have been working on the short labels for the Suny tracks.
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncodeSunyAlbanyTiling.ra
  • lines changed 111, context: html, text, full: html, text
    I have changed the names of the include files to match the standard. I also have been working on the short labels for the Suny tracks.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisDnaPet.html
  • lines changed 15, context: html, text, full: html, text
    Added the methods changes from Atif Shahab
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.html
  • lines changed 3, context: html, text, full: html, text
    removed the reference to all raw signal
  • lines changed 3, context: html, text, full: html, text
    removed the reference to split alignments
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra
  • lines changed 46, context: html, text, full: html, text
    Changed the metadata and the short labels for GisRnaSeq
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.ra
  • lines changed 0, context: html, text, full: html, text
    added a space
  • lines changed 31, context: html, text, full: html, text
    Changed the long and short labels to include antibody
  • lines changed 4, context: html, text, full: html, text
    Changed the antibody from upper case to lower case.
  • lines changed 246, context: html, text, full: html, text
    I have changed the names of the include files to match the standard. I also have been working on the short labels for the Suny tracks.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyTiling.ra
  • lines changed 1, context: html, text, full: html, text
    Changed the antibody from upper case to lower case.
  • lines changed 111, context: html, text, full: html, text
    I have changed the names of the include files to match the standard. I also have been working on the short labels for the Suny tracks.