Commits for braney
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v237_base to v238_preview (2010-08-03 to 2010-08-10) v238
- v238 preview
- src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text
- draw in MG_BLACK, not 1 (which is white in 32-bit)
- src/hg/hgTracks/simpleTracks.c - lines changed 1, context: html, text, full: html, text
- add submission id for gencode
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencode.ra - lines changed 7, context: html, text, full: html, text
- fix link out for Gencode V3
- src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- take out metadata for hg19 wgEncodeGencode
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text
- metadata for hg19 gencodeV4
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencode.ra - lines changed 89, context: html, text, full: html, text
- drop alignments from UCSF Brain Methyl since they aren't correct
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra - lines changed 73, context: html, text, full: html, text
- take out spurious url variable
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- fix up some gencode table naming inconsistencies
- src/hg/makeDb/doc/encodeDccHg19/gencodeV4.txt - lines changed 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- add association between hg19 Gencode class and GTF tables
- src/hg/makeDb/schema/all.joiner - lines changed 14, context: html, text, full: html, text
- put gencode ensembl transcript id link in trackDb instead of hard-coding it
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tagTypes.tab - lines changed 2, context: html, text, full: html, text
- added wgEncodeMapability
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- put this in metaDb
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeMapability.ra - lines changed 85, context: html, text, full: html, text
- change .bw to .bigWig
- src/hg/encode/encodeLoad/doEncodeLoad.pl - lines changed 3, context: html, text, full: html, text
- change .bw to .bigWig
- src/hg/encode/encodeLoad/doEncodeUnload.pl - lines changed 1, context: html, text, full: html, text
- fix typos in preamble
- src/hg/encode/encodeLoad/doEncodeLoad.pl - lines changed 4, context: html, text, full: html, text
- change Myers to HudsonAlpha
- src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaRnaSeq.ra - lines changed 13, context: html, text, full: html, text
- change back to old code
- src/hg/lib/trackDbCustom.c - lines changed 1, context: html, text, full: html, text
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