Commits for hiram
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v237_base to v238_preview (2010-08-03 to 2010-08-10) v238
- updated with v59 definitions
- src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 168, context: html, text, full: html, text
- removed older trashCleaning.sh script
- src/product/scripts/trashCleaning.sh - lines changed 124, context: html, text, full: html, text
- remove the safety exit 0, this is now live
- src/product/scripts/trashCleanMonitor.csh - lines changed 2, context: html, text, full: html, text
- finalized versions ready to go
- src/product/scripts/trashCleanMonitor.csh - lines changed 35, context: html, text, full: html, text
- src/product/scripts/trashCleaner.csh - lines changed 49, context: html, text, full: html, text
- omit reference to my location
- src/product/scripts/trashCleanMonitor.csh - lines changed 1, context: html, text, full: html, text
- trash cleaner now in two parts to verify OK
- src/product/scripts/trashCleanMonitor.csh - lines changed 50, context: html, text, full: html, text
- src/product/scripts/trashCleaner.csh - lines changed 27, context: html, text, full: html, text
- add db setting to table browser custom tracks
- src/hg/lib/customFactory.c - lines changed 2, context: html, text, full: html, text
- was missing wibFile setting on track line for cts from table browser
- src/hg/lib/customTrack.c - lines changed 1, context: html, text, full: html, text
- initial contents of single trash cleaner all in one
- src/product/scripts/trashCleaner.csh - lines changed 225, context: html, text, full: html, text
- adding the two chrM sequences to haplotype track
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 8, context: html, text, full: html, text
- should be oviAri not oviAra on newAssembliesList
- src/hg/utils/phyloTrees/chainNet.pl - lines changed 1, context: html, text, full: html, text
- checking incoming bed files for legal coordinates
- src/hg/lib/customFactory.c - lines changed 4, context: html, text, full: html, text
- using an overlap of 500 bases during the 5K split
- src/hg/utils/automation/doSameSpeciesLiftOver.pl - lines changed 2, context: html, text, full: html, text
- adding haplotype position tracks to hg19 and hg18 and lift over chain experiments
- src/hg/makeDb/trackDb/human/hg18/haplotypeLocations.html - lines changed 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra - lines changed 23, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 2, context: html, text, full: html, text
- use proper dateTime result string
- src/hg/useCount/useCount.c - lines changed 3, context: html, text, full: html, text
- adding difference tracks hg18 to hg19 to hg18
- src/hg/makeDb/trackDb/human/hg18/hg19ContigDiff.html - lines changed 31, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra - lines changed 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/hg18ContigDiff.html - lines changed 31, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 7, context: html, text, full: html, text
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