File Changes for braney

v238_base to v239_preview (2010-08-17 to 2010-08-24) v239

• src/hg/encode/encodeLoad/makefile
  • lines changed 1, context: html, text, full: html, text
    take out flags that were preventing the most recent copy from being installed
• src/hg/encode/hgEncodeVocab/hgEncodeVocab.c
  • lines changed 1, context: html, text, full: html, text
    fix another bonehead move (left out a '/')
• src/hg/encode/validateCv/makefile
  • lines changed 18, context: html, text, full: html, text
    shell of a program to validate cv.ra and make sure metadata is compliant
• src/hg/encode/validateCv/validateCv.c
  • lines changed 39, context: html, text, full: html, text
    shell of a program to validate cv.ra and make sure metadata is compliant
  • lines changed 15, context: html, text, full: html, text
    add usage message (woooo!)
• src/hg/makeDb/doc/felCat4.txt
  • lines changed 14, context: html, text, full: html, text
    re-did Human Proteins.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAffyRnaChip.ra
  • lines changed 105, context: html, text, full: html, text
    update subId to hg19 submission id
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencode.ra
  • lines changed 5, context: html, text, full: html, text
    add a few missing variables
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeMapability.ra
  • lines changed 7, context: html, text, full: html, text
    change the filenames to be *.bigWig
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 6, context: html, text, full: html, text
    remove metadata from Mapabililty composite
  • lines changed 144, context: html, text, full: html, text
    get wgEncodeGencode into it's own include file
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencode.ra
  • lines changed 142, context: html, text, full: html, text
    get wgEncodeGencode into it's own include file
  • lines changed 1, context: html, text, full: html, text
    fix up label for the 2way
• src/utils/bedToBigBed/bedToBigBed.c
  • lines changed 15, context: html, text, full: html, text
    change code that was allocating a 13mb array on the stack to use a scratch area instead
  • lines changed 1, context: html, text, full: html, text
    oops, meant to use needLargeMem to avoid the memsettomg tp -
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    v239 preview