File Changes for cricket

v242_base to v243_preview (2010-10-12 to 2010-10-19) v243

• src/hg/htdocs/ENCODE/transfragBed6CshlDiscription.html
  • lines changed 252, context: html, text, full: html, text
    Additional track description reference for CshlShortRnaSeq
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlShort.release1.notes
  • lines changed 187, context: html, text, full: html, text
    change notes for CshlShort
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGisRnaPet.release1.notes
  • lines changed 304, context: html, text, full: html, text
    new release notes
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGisRnaSeq.release1.notes
  • lines changed 88, context: html, text, full: html, text
    new release notes
  • lines changed 8, context: html, text, full: html, text
    added fasta files
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGisRnaSeq.release1.notes.txt
  • lines changed 88, context: html, text, full: html, text
    new release notes
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeRikenCage.release1.notes
  • lines changed 731, context: html, text, full: html, text
    change notes for Riken Cage
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra
  • lines changed 127, context: html, text, full: html, text
    added fastq information from hg18
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
  • lines changed 157, context: html, text, full: html, text
    added bioRep for Carrie
  • lines changed 18, context: html, text, full: html, text
    more standardization changes and fixing dates for the fastqs
  • lines changed 44, context: html, text, full: html, text
    changed dates on fastqs
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    renamed the trackDb for CshlLongRna
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncodeCshlLongRnaSeq.ra
  • lines changed 88, context: html, text, full: html, text
    added new subtracks
  • lines changed 858, context: html, text, full: html, text
    short and long labels, matrix
  • lines changed 3041, context: html, text, full: html, text
    renamed the trackDb for CshlLongRna
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.ra
  • lines changed 3041, context: html, text, full: html, text
    renamed the trackDb for CshlLongRna
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.html
  • lines changed 62, context: html, text, full: html, text
    new track description from CSHL short
  • lines changed 1, context: html, text, full: html, text
    added broken link to supplimentaty track description
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.ra
  • lines changed 99, context: html, text, full: html, text
    changed short labels, the order of the matrix, alignments set to hide, all of K562 to on, prostate off
  • lines changed 2, context: html, text, full: html, text
    fixed the color display on bam
  • lines changed 2, context: html, text, full: html, text
    fixed the pros labels
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra
  • lines changed 147, context: html, text, full: html, text
    added new subtracks
  • lines changed 200, context: html, text, full: html, text
    first draft of wrangling
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra
  • lines changed 17, context: html, text, full: html, text
    changed the H1-hESC to be a tier 1 and reflect in the ordering, and the default on status
  • lines changed 9, context: html, text, full: html, text
    changed matrix order, hide for alignments, PolyA+ for Extract
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.ra
  • lines changed 506, context: html, text, full: html, text
    new release notes
  • lines changed 298, context: html, text, full: html, text
    short labels
  • lines changed 86, context: html, text, full: html, text
    more standardization changes and fixing dates for the fastqs
• src/hg/makeDb/trackDb/human/hg19/wgEncodeYaleRnaSeq.ra
  • lines changed 23, context: html, text, full: html, text
    added new subtracks