File Changes for cricket

v244_preview2 to v244_base (2010-11-30 to 2010-12-07) v244

• src/hg/encode/DAFs/2.0/haibCnv.daf
  • lines changed 13, context: html, text, full: html, text
    commented out the trouble line and added longLabelswq
• src/hg/encode/DAFs/2.0/haibMethyl27.daf
  • lines changed 46, context: html, text, full: html, text
    This was changed to MethylBead
• src/hg/encode/DAFs/2.0/haibMethylBead.daf
  • lines changed 43, context: html, text, full: html, text
    This is trying to accommodate the Methyl450 data
• src/hg/encode/DAFs/2.0/sunyRnaSeq.daf
  • lines changed 19, context: html, text, full: html, text
    yes to replicates, added ripTgtProtein back
• src/hg/encode/DAFs/2.0/sunySwitchgear.daf
  • lines changed 15, context: html, text, full: html, text
    changed to have ripTargetProtein again
• src/hg/encode/encodeStatus/encodeStatus.pl
  • lines changed 13, context: html, text, full: html, text
    removed old error message from the approved status
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeCaltechRnaSeq.release1.notes
  • lines changed 895, context: html, text, full: html, text
    added new releasenotes for Caltech
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • lines changed 3, context: html, text, full: html, text
    changed the Tier2 status of NHEK and H1-hESC where it is hard coded
• src/hg/makeDb/trackDb/human/hg18/wgEncodeChromatinMap.ra
  • lines changed 1, context: html, text, full: html, text
    changed the Tier2 status of NHEK and H1-hESC where it is hard coded
• src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaChipSeq.new.ra
  • lines changed 18, context: html, text, full: html, text
    changed the Tier2 status of NHEK and H1-hESC where it is hard coded
• src/hg/makeDb/trackDb/human/hg18/wgEncodeUwDnaseSeq.ra
  • lines changed 4, context: html, text, full: html, text
    changed the Tier2 status of NHEK and H1-hESC where it is hard coded
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra
  • lines changed 8825, context: html, text, full: html, text
    changed the subId on the resubmitted fastqs
  • lines changed 8825, context: html, text, full: html, text
    Revert "changed the subId on the resubmitted fastqs"I saved the wrong file This reverts commit 4d2ac33b15736e1f3db68e378bba797cecebabe7.
  • lines changed 47, context: html, text, full: html, text
    changing subId for fastq resubmissions
  • lines changed 53, context: html, text, full: html, text
    changed subId and date for resubmitted MCF-7
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
  • lines changed 37, context: html, text, full: html, text
    fixed 025CH+, 025NL+, 025NP+, 026CH+, 026NL+, 026NP+ to not have +
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 39, context: html, text, full: html, text
    Changed name of one fastq
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    added the SunySwitchgear .ra and .html for new track
• src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.html
  • lines changed 12, context: html, text, full: html, text
    removed old signal tracks and removed pk from short labels
  • lines changed 12, context: html, text, full: html, text
    removed references to mutliple views in the html file and the views column in the ra file
• src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.ra
  • lines changed 286, context: html, text, full: html, text
    addressing note #30 from Track #58
  • lines changed 552, context: html, text, full: html, text
    removed old signal tracks and removed pk from short labels
  • lines changed 7, context: html, text, full: html, text
    extending shortLabels to have full cell names
  • lines changed 1, context: html, text, full: html, text
    removed references to mutliple views in the html file and the views column in the ra file
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.html
  • lines changed 81, context: html, text, full: html, text
    Georgis track description
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.ra
  • lines changed 26, context: html, text, full: html, text
    fixed the errant Paired view
  • lines changed 120, context: html, text, full: html, text
    short labels and long labels were too long, fixed
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunySwitchgear.html
  • lines changed 155, context: html, text, full: html, text
    added the SunySwitchgear .ra and .html for new track
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunySwitchgear.ra
  • lines changed 30, context: html, text, full: html, text
    added the SunySwitchgear .ra and .html for new track