File Changes for hiram

v247_preview to v247_preview2 (2011-02-01 to 2011-02-08) v247

• src/hg/hgc/bigBedClick.c
  • lines changed 9, context: html, text, full: html, text
    now using bigBed as a bedDetail system
• src/hg/lib/ncbiIncidentDb.as
  • lines changed 9, context: html, text, full: html, text
    .as file definition used to construct bigBed file for this track
• src/hg/makeDb/doc/makeEnsembl.txt
  • lines changed 1111, context: html, text, full: html, text
    done with v61 ensembl build
• src/hg/makeDb/schema/all.joiner
  • lines changed 1, context: html, text, full: html, text
    add DanRer7 to non-self chains list
• src/hg/makeDb/trackDb/README
  • lines changed 8, context: html, text, full: html, text
    move ncbiIncidentDb to top level trackDb and document new bigBed option
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 6, context: html, text, full: html, text
    now using bigBed as a bedDetail system
  • lines changed 3, context: html, text, full: html, text
    remove debugging BB labels
  • lines changed 11, context: html, text, full: html, text
    move ncbiIncidentDb to top level trackDb and document new bigBed option
• src/hg/makeDb/trackDb/ncbiIncidentDb.html
  • lines changed 5, context: html, text, full: html, text
    move ncbiIncidentDb to top level trackDb and document new bigBed option
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 1, context: html, text, full: html, text
    now using bigBed as a bedDetail system
• src/hg/makeDb/trackDb/trackDb.ra
  • lines changed 11, context: html, text, full: html, text
    move ncbiIncidentDb to top level trackDb and document new bigBed option
  • lines changed 1, context: html, text, full: html, text
    adjust priority for NCBI Incident track
• src/hg/makeDb/trackDb/zebrafish/danRer7/danRer7multipleChainNet.html
  • lines changed 155, context: html, text, full: html, text
    finalize the chain/net documentation
• src/hg/makeDb/trackDb/zebrafish/danRer7/trackDb.ra
  • lines changed 3, context: html, text, full: html, text
    finalize the chain/net documentation
• src/hg/utils/automation/EnsGeneAutomate.pm
  • lines changed 174, context: html, text, full: html, text
    adding v61 definitions
• src/hg/utils/automation/ncbiIncidentDb.pl
  • lines changed 177, context: html, text, full: html, text
    first version of processing sql files from xml dump from NCBI
  • lines changed 113, context: html, text, full: html, text
    adding mouse and zebrafish, it is hokey, but it works
• src/product/ex.hg.conf
  • lines changed 8, context: html, text, full: html, text
    document db.socket and db.port variables