Commits for tdreszer
switch to files view, user index
v249_preview to v249_preview2 (2011-03-15 to 2011-03-22) v249
- Added useful function used by text search alogrithm
- Needed special case of searchability for composite, since it is not directly searchable but IS indirectly
- Special case for beta is not an rsync or an htdocs-downloads solution.
- Added search for composites by name, desc and group.
- src/hg/hgFileSearch/hgFileSearch.c - lines changed 123, context: html, text, full: html, text
- Fixed radiobuttons for IE (redmine 3189)
- src/hg/hgTracks/searchTracks.c - lines changed 4, context: html, text, full: html, text
- Removed some obsolete objects (which were replaced by V2s)
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeChromatinMap.ra - lines changed 1527, context: html, text, full: html, text
- Removed obsolete objs which were replaced by V2s
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeUwDnaseSeq.ra - lines changed 312, context: html, text, full: html, text
- Removed obsolete objs which were replaced by V2s
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeUwAffyExonArray.ra - lines changed 66, context: html, text, full: html, text
- Removed obsolete objects. There is no H3K4me1 in UW Histone hg18
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeUwChIPSeq.ra - lines changed 130, context: html, text, full: html, text
- Removed obsolete objects. cell=HIPEpiC and phase=G1 don't exist for hg18 UW Dnase
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeUwDnaseSeq.ra - lines changed 108, context: html, text, full: html, text
- Zinba is some mythical character that is trapped in hg18 land. No sign of Zinba in hg19
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 11, context: html, text, full: html, text
- Fixed bug resulting from 'control' being both a type and a term. Solution: exclude typeOfTerms lookup.
- src/hg/encode/hgEncodeVocab/hgEncodeVocab.c - lines changed 3, context: html, text, full: html, text
- Missed some Zinba voodoo
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 11, context: html, text, full: html, text
- Broad HMM has been lifted over from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHmm.ra - lines changed 163, context: html, text, full: html, text
- Minor changes in anticipation of hg19 lift over.
- src/hg/makeDb/trackDb/human/hg18/wgEncodeBroadHmm.html - lines changed 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeBroadHmm.ra - lines changed 17, context: html, text, full: html, text
- Fime names are bed not bed9
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHmm.ra - lines changed 10, context: html, text, full: html, text
- Support for downloads only tracks in the config list even when they are not in a supertrack
- src/hg/hgTracks/config.c - lines changed 65, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.h - lines changed 5, context: html, text, full: html, text
- Sorry. Had wgEncode setting twice. Thanks Angie for finding this.
- src/hg/makeDb/trackDb/human/hg18/wgEncodeBroadHmm.ra - lines changed 1, context: html, text, full: html, text
- Finally got around to loading ancient Yale TFBS submissions
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeYaleChIPseq.ra - lines changed 723, context: html, text, full: html, text
- Finally got around to loading 5 ancient submissions.
- src/hg/makeDb/trackDb/human/hg18/wgEncodeYaleChIPseq.new.ra - lines changed 48, context: html, text, full: html, text
- Fixed bug with fileFilter link to hgEncodeVocab.
- Added support for turning slPairs list back into string
- Support required for mdbPrint/mdbUpdate -encodeExp
- src/hg/inc/encode/encodeExp.h - lines changed 8, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 127, context: html, text, full: html, text
- Integrated mdbPrint/mdbUpdate -encodeExp with the encodeExp APIs.
- src/hg/makeDb/mdbUpdate/mdbPrint.c - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/mdbUpdate/mdbUpdate.c - lines changed 8, context: html, text, full: html, text
- Cheking in wrangling docs from past work. Moved some hg18 stuff to the hg18 doc
- src/hg/makeDb/doc/encodeDccHg18/broadBernstein.txt - lines changed 550, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeDccHg18/yaleDavisHarvardSnyder.txt - lines changed 244, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeDccHg19/broadHistoneBernstein.hg19.txt - lines changed 486, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeDccHg19/openChromCrawford.hg19.txt - lines changed 664, context: html, text, full: html, text
- Getting impatient on Jason's liftOver.
- src/hg/makeDb/doc/encodeDccHg19/broadHistoneBernstein.hg19.txt - lines changed 183, context: html, text, full: html, text
- Late changing stuses from 'reviewing' to 'released'
- src/hg/makeDb/doc/encodeDccHg19/broadHistoneBernstein.hg19.txt - lines changed 365, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeDccHg19/openChromCrawford.hg19.txt - lines changed 51, context: html, text, full: html, text
- hwdev does rsync now.
- Fix floating link to description
- src/hg/hgFileUi/hgFileUi.c - lines changed 8, context: html, text, full: html, text
- Minor code cleanup due to debuging nav link problem on hgFileUi.
- Fix bug where search was done before the button was pressed.
- src/hg/hgFileSearch/hgFileSearch.c - lines changed 1, context: html, text, full: html, text
- Jason's liftover of HMM from hg18 is finally here.
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHmm.ra - lines changed 27, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 5, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHmm.html - lines changed 132, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHmm.ra - lines changed 117, context: html, text, full: html, text
- Fixed filterBy for '_'s.
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHmm.ra - lines changed 1, context: html, text, full: html, text
- First submission of 1 percent verification data submitted as 'attic by exp' archives
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 33, context: html, text, full: html, text
- And 1 percent verification for 2 of FAIRE's
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 33, context: html, text, full: html, text
- Files are tgz, not doc.gz
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 5, context: html, text, full: html, text
- And validation docs for 2 cell lines in Open Chrom Chip
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 115, context: html, text, full: html, text
switch to files view, user index