File Changes for cricket

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v250_preview to v250_preview2 (2011-04-05 to 2011-04-12) v250

src/hg/encode/encodeMkChangeNotes/encodeMkChangeNotes
- lines changed 1, context: html, text, full: html, text
  Added txt files to encodeMkChangeNotes and reran the script to get correct release notes for HaibGenoType
src/hg/makeDb/doc/encodeDccHg18/wgEncodeDukeAffyExonArray.release2.notes.txt
- lines changed 28, context: html, text, full: html, text
  Reran the script with release 2 replacing release 1. Jeff had run it backwards.
src/hg/makeDb/doc/encodeDccHg19/wgEncodeHaibGenotype.release1.notes
- lines changed 16, context: html, text, full: html, text
  Added txt files to encodeMkChangeNotes and reran the script to get correct release notes for HaibGenoType
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeAffyRnaChip.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeBuOrchid.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
- lines changed 2, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
- lines changed 2, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeGisDnaPet.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeGisPet.ra
- lines changed 127, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeGisRnaSeq.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeHelicosRnaSeq.ra
- lines changed 6, context: html, text, full: html, text
  A few more expVars added to metaDb
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeHudsonalphaCnv.ra
- lines changed 52, context: html, text, full: html, text
  Removed old metaData for release 1
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeRikenCage.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeSunyalbanyRnaGeneChip.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to the metaDb for all composites
src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeYaleRNAseq.ra
- lines changed 7, context: html, text, full: html, text
  Changed the treatment IFN*30m to IFN*30 to match the CV
src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaCnv.new.html
- lines changed 2, context: html, text, full: html, text
  Changed the colors to swap oragne and red and choose a better orange
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAffyRnaChip.ra
- lines changed 6, context: html, text, full: html, text
  Adding expVars to those that were forgotten in the first round
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBuOrchid.ra
- lines changed 7, context: html, text, full: html, text
  Adding expVars to those that were forgotten in the first round
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra
- lines changed 2, context: html, text, full: html, text
  Adding expVars to those that were forgotten in the first round
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
- lines changed 933, context: html, text, full: html, text
  Changing labels, adding dccRep, changing the fileSortOrder, adding Generation 0 to protocolID for early data
- lines changed 596, context: html, text, full: html, text
  Revoking HepG2 experiments, wet lab issues
- lines changed 259, context: html, text, full: html, text
  Changing according to Issue 1634
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
- lines changed 290, context: html, text, full: html, text
  Adding md5sums to the metaData, showing with fileSortOrder
src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra
- lines changed 6, context: html, text, full: html, text
  A few more expVars added to metaDb
src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
- lines changed 1, context: html, text, full: html, text
  Changed release tags to be in the include statement
src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.ra
- lines changed 107, context: html, text, full: html, text
  Changing labels, adding dccRep, changing the fileSortOrder, adding Generation 0 to protocolID for early data
- lines changed 179, context: html, text, full: html, text
  Sort the Tier 1 and Tier 2 to the top
- lines changed 60, context: html, text, full: html, text
  Revoking HepG2 experiments, wet lab issues
- lines changed 507, context: html, text, full: html, text
  Changing according to Issue 1634
src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibGenotype.html
- lines changed 2, context: html, text, full: html, text
  Changed Release 2 to Release Notes
- lines changed 2, context: html, text, full: html, text
  Changed orange and red, redmine ticket 3499
- lines changed 2, context: html, text, full: html, text
  Changed the order of the color listing Issue 3499 #6
src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.new.ra
- lines changed 1, context: html, text, full: html, text
  Adding md5sums to the metaData, showing with fileSortOrder
src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.ra
- lines changed 1, context: html, text, full: html, text
  Long label had two RIP-Chips in it
src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.ra
- lines changed 428, context: html, text, full: html, text
  Changed release tags to be in the include statement

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