File Changes for cricket

v252_preview2 to v252_base (2011-05-31 to 2011-06-07) v252

• src/hg/encode/encodeValidate/config/fields.ra
  • lines changed 6, context: html, text, full: html, text
    Adding a term spikeInPool so that we can determine which pool was used
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 7, context: html, text, full: html, text
    Changing the Tam to OHTam as discovered it was registered as the wrong molecule by the lab
  • lines changed 2, context: html, text, full: html, text
    added the cv validation to View
  • lines changed 7, context: html, text, full: html, text
    Adding mitochondira
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra
  • lines changed 17, context: html, text, full: html, text
    Renamed fastqs that had a V2 in them due to wrong DAF being used
  • lines changed 149, context: html, text, full: html, text
    Removed the dateSubmitted1 error
  • lines changed 920, context: html, text, full: html, text
    Added md5sums
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 2123, context: html, text, full: html, text
    Adding the Exons
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra
  • lines changed 573, context: html, text, full: html, text
    Changing the metaData as per conversation with Atif, marking as clone-free and clone-based
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
  • lines changed 89, context: html, text, full: html, text
    Added a few missing signals, cleaned up long and short labels, started to prep this for going to QA, see note 6 of issue 2020
  • lines changed 35, context: html, text, full: html, text
    Renamed to not have Rep1 when there was really no replicates
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra
  • lines changed 5, context: html, text, full: html, text
    Changed the submission directory for the resubmitted data, fixed a comma error and changed the long labels to Kates new format
• src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.ra
  • lines changed 114, context: html, text, full: html, text
    Took the rep 3 and 4 back out of the attic, I never got confirmation that they should be there
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra
  • lines changed 92, context: html, text, full: html, text
    Changing the metaData as per conversation with Atif, marking as clone-free and clone-based
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.new.ra
  • lines changed 763, context: html, text, full: html, text
    Added a few missing signals, cleaned up long and short labels, started to prep this for going to QA, see note 6 of issue 2020
  • lines changed 21, context: html, text, full: html, text
    Changing the defualts
  • lines changed 6, context: html, text, full: html, text
    Renamed to not have Rep1 when there was really no replicates
  • lines changed 16, context: html, text, full: html, text
    Changing the default on off
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.ra
  • lines changed 3, context: html, text, full: html, text
    Changed the submission directory for the resubmitted data, fixed a comma error and changed the long labels to Kates new format